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The map label for this gene is spmB [H]

Identifier: 85859685

GI number: 85859685

Start: 1914096

End: 1914626

Strand: Direct

Name: spmB [H]

Synonym: SYN_01086

Alternate gene names: 85859685

Gene position: 1914096-1914626 (Clockwise)

Preceding gene: 85859684

Following gene: 85859686

Centisome position: 60.2

GC content: 46.89

Gene sequence:

>531_bases
ATGATTGAGCATGTCAGTTATCTATCCCTGATTATTATTCCCCTGTTCATTCTGTTCACGGTGCTTTACGGAACGTTTAA
AAAAGTCCGTGTCTATGATTCCTTCGTTGCCGGAGCAAAAGAAGGTCCGGGTATCATCCTGAACATTTTCCCCTACCTGT
TGACGATTTTTGTCGCTATTAAATGTTTTCAGGCTTCGGGAGCCTTCGATTGCCTCAGAAATATTTTTTACAGCGCCTTC
GCTTTTCTGGATATCCCGATCGAAGTCATCTCCATGGCTCTTATCAAACCTCTTTCCGGCAGCGCATCAACCGCGCTGTT
TACCGACATCGTCAAAACAGCCGGACCGGATTCGACAGCAGCTCGAATGACCGCCGTGATCATGGGCAGTGCGGAGACGA
CCTTTTATGTTCTTGCTGTTTATCTTGGAGCAGTCAGCATCAGCAGAACGCGCTATCTTGTGCCCGTCTGTCTGGCTGCC
GATTTCATCGGAATCATTGTCTCCATCATCGTTGTGAGGTTGTTTTTTTAA

Upstream 100 bases:

>100_bases
CGGAAAATCCGGCAGAGGTCGTTGTGCCGGTATTGATCGCCACGTTCATTTCAGCGGCAACGGCACTGATTATCCTCTTC
TCTTTCAGGAAGATCCTTAA

Downstream 100 bases:

>100_bases
CATGTGCCGGCTTCTTGGCATCACGAATTTCGAATTTTCAAAGCATCAGCAGATCGTCCTGAACTTCTGCGAACTCGCCC
GCAGCGGCATGGTCATGAAA

Product: spore maturation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIEHVSYLSLIIIPLFILFTVLYGTFKKVRVYDSFVAGAKEGPGIILNIFPYLLTIFVAIKCFQASGAFDCLRNIFYSAF
AFLDIPIEVISMALIKPLSGSASTALFTDIVKTAGPDSTAARMTAVIMGSAETTFYVLAVYLGAVSISRTRYLVPVCLAA
DFIGIIVSIIVVRLFF

Sequences:

>Translated_176_residues
MIEHVSYLSLIIIPLFILFTVLYGTFKKVRVYDSFVAGAKEGPGIILNIFPYLLTIFVAIKCFQASGAFDCLRNIFYSAF
AFLDIPIEVISMALIKPLSGSASTALFTDIVKTAGPDSTAARMTAVIMGSAETTFYVLAVYLGAVSISRTRYLVPVCLAA
DFIGIIVSIIVVRLFF
>Mature_176_residues
MIEHVSYLSLIIIPLFILFTVLYGTFKKVRVYDSFVAGAKEGPGIILNIFPYLLTIFVAIKCFQASGAFDCLRNIFYSAF
AFLDIPIEVISMALIKPLSGSASTALFTDIVKTAGPDSTAARMTAVIMGSAETTFYVLAVYLGAVSISRTRYLVPVCLAA
DFIGIIVSIIVVRLFF

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 19176; Mature: 19176

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHVSYLSLIIIPLFILFTVLYGTFKKVRVYDSFVAGAKEGPGIILNIFPYLLTIFVAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KCFQASGAFDCLRNIFYSAFAFLDIPIEVISMALIKPLSGSASTALFTDIVKTAGPDSTA
HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHH
ARMTAVIMGSAETTFYVLAVYLGAVSISRTRYLVPVCLAADFIGIIVSIIVVRLFF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEHVSYLSLIIIPLFILFTVLYGTFKKVRVYDSFVAGAKEGPGIILNIFPYLLTIFVAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KCFQASGAFDCLRNIFYSAFAFLDIPIEVISMALIKPLSGSASTALFTDIVKTAGPDSTA
HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHH
ARMTAVIMGSAETTFYVLAVYLGAVSISRTRYLVPVCLAADFIGIIVSIIVVRLFF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]