| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is spmA [H]
Identifier: 85859684
GI number: 85859684
Start: 1913524
End: 1914099
Strand: Direct
Name: spmA [H]
Synonym: SYN_01085
Alternate gene names: 85859684
Gene position: 1913524-1914099 (Clockwise)
Preceding gene: 85859683
Following gene: 85859685
Centisome position: 60.19
GC content: 50.69
Gene sequence:
>576_bases ATGAACATGATCTGGTTGATCCTGATCTCGGTCAGCATCGTTTTCGCCGTTTTTACAGGAAACTTGGAACCCTTTACCAA AGCGATATTCGATGGCGCCAAATCGGCGGTGGAAACATCCCTGTACCTGCTGGGCATCGTATCAGTCTGGATGGGAATCA CCAGGATTCTGGAAGACTCCGGGTTGATTTATCGGATCGCCCATGCATTCCAGCCGATCATTTCCCGGCTTTTCAAAAAC ATCCCGGGGGACCACCCTTCCATTACCGCGATCACCCTCAATGTCCTGGCCAATCTCCTGGGACTTGGCAATGCCGCCAC CCCTCTGGGAATCAAAGCCATGCAGGAACTCGATACCCTTAACCCGGACAAAGGGGCAGTCACATTTGAAATGATGATTT TTGTTATCCTGAACACCGCCAGCATTCAGTTGATTCCCTTTACAGTAATCGGCATCCTTGCAGCCTTCGGCGCGGAAAAT CCGGCAGAGGTCGTTGTGCCGGTATTGATCGCCACGTTCATTTCAGCGGCAACGGCACTGATTATCCTCTTCTCTTTCAG GAAGATCCTTAAATGA
Upstream 100 bases:
>100_bases TTCAGAACAAGATCACCCTTCCGGTCGGAGCACAGGTGGAGTTGAATACGGAGAGGAAGAGTCTCGTTATCACCGAGCTC TCCCTGCCTGGAGTCCGATC
Downstream 100 bases:
>100_bases TTGAGCATGTCAGTTATCTATCCCTGATTATTATTCCCCTGTTCATTCTGTTCACGGTGCTTTACGGAACGTTTAAAAAA GTCCGTGTCTATGATTCCTT
Product: spore maturation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNMIWLILISVSIVFAVFTGNLEPFTKAIFDGAKSAVETSLYLLGIVSVWMGITRILEDSGLIYRIAHAFQPIISRLFKN IPGDHPSITAITLNVLANLLGLGNAATPLGIKAMQELDTLNPDKGAVTFEMMIFVILNTASIQLIPFTVIGILAAFGAEN PAEVVVPVLIATFISAATALIILFSFRKILK
Sequences:
>Translated_191_residues MNMIWLILISVSIVFAVFTGNLEPFTKAIFDGAKSAVETSLYLLGIVSVWMGITRILEDSGLIYRIAHAFQPIISRLFKN IPGDHPSITAITLNVLANLLGLGNAATPLGIKAMQELDTLNPDKGAVTFEMMIFVILNTASIQLIPFTVIGILAAFGAEN PAEVVVPVLIATFISAATALIILFSFRKILK >Mature_191_residues MNMIWLILISVSIVFAVFTGNLEPFTKAIFDGAKSAVETSLYLLGIVSVWMGITRILEDSGLIYRIAHAFQPIISRLFKN IPGDHPSITAITLNVLANLLGLGNAATPLGIKAMQELDTLNPDKGAVTFEMMIFVILNTASIQLIPFTVIGILAAFGAEN PAEVVVPVLIATFISAATALIILFSFRKILK
Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]
COG id: COG2715
COG function: function code R; Uncharacterized membrane protein, required for spore maturation in B.subtilis.
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 20587; Mature: 20587
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIWLILISVSIVFAVFTGNLEPFTKAIFDGAKSAVETSLYLLGIVSVWMGITRILEDS CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLIYRIAHAFQPIISRLFKNIPGDHPSITAITLNVLANLLGLGNAATPLGIKAMQELDTL CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NPDKGAVTFEMMIFVILNTASIQLIPFTVIGILAAFGAENPAEVVVPVLIATFISAATAL CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IILFSFRKILK HHHHHHHHHHC >Mature Secondary Structure MNMIWLILISVSIVFAVFTGNLEPFTKAIFDGAKSAVETSLYLLGIVSVWMGITRILEDS CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLIYRIAHAFQPIISRLFKNIPGDHPSITAITLNVLANLLGLGNAATPLGIKAMQELDTL CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NPDKGAVTFEMMIFVILNTASIQLIPFTVIGILAAFGAENPAEVVVPVLIATFISAATAL CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IILFSFRKILK HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 1548223; 9384377; 7642500 [H]