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The map label for this gene is ydiC [H]

Identifier: 85859438

GI number: 85859438

Start: 1642951

End: 1643673

Strand: Direct

Name: ydiC [H]

Synonym: SYN_00914

Alternate gene names: 85859438

Gene position: 1642951-1643673 (Clockwise)

Preceding gene: 85859437

Following gene: 85859439

Centisome position: 51.68

GC content: 52.01

Gene sequence:

>723_bases
ATGATGACGCTCGCGCTGGATACGTCCTCCAAAACTGTGGGAATTGCCCTTCTTGATGGAGAGGAAATTCTTGCGGAGAC
CTTTTTTAACCTGAACGTGAATTCATCTCTTCTACTGCTTCCGGCCATCGAGGATATGTTCCGGATAACGAACGTGAGCG
CGGAACATATCGACCTCTGGGCCTGCACTGTGGGACCGGGCTCCTTTACCGGTTTGAGAATCGGAGTCGGTACGGTAAAA
GGTCTGGCTCTGGCGACGGGACGACCTGTCGTGGGGGTTTCCACCCTGGAAGCTCTCGCTTTCAATGGCGTTGACGCCGG
GATGATGATCTGCCCCATGATGGATGCACAGAAAAATCAGATCTATACAGCTCTTTACTTTCCTGGTTCCGGATATTCCC
TGAAAAGAATCGGAGATGAGCGAAGCACCGATCTTCAGACTTTTCTGGTATCAATCGATGAAAATGTGCTGTTTATCGGC
GATGGGGCGCTCAAACACCGGGATCGCATCAGCGAGTTCCTTCCATCCCAATCCTGTTTTGCCGCCCCTCATCTCCATGC
TGTCAGAGCATCTTCCGTCGGGCTGTTGGGCCTTAAATATCATGAACGAGGCGAGACCCTTGATCTTTTAACCTTCACAC
CCCGCTACCTCCGTCTTTCCGAGGCGGAATTGAAACTGGCGCAACAGAATATCCAGGCCGGACCGGAAAGTGAAAACGGT
TGA

Upstream 100 bases:

>100_bases
TCTGGTCCTCCTTATGGCTTTTGCTTTTGCTATGGATATAAGTCGCTTGAACATCGGATTCATCGATGAATTTTTTAAAA
TGATCGGCAGGTAGAAAGAC

Downstream 100 bases:

>100_bases
TATGCAGATCCATTCATGGAAGGCGGCTTCGATTCAAAACAAGAATCATTGACAAGCCTCTTCAATTAAGATAAGTCAAG
GTTCCTTTTTAAATTAAACA

Product: M22 family non-proteolytic peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MMTLALDTSSKTVGIALLDGEEILAETFFNLNVNSSLLLLPAIEDMFRITNVSAEHIDLWACTVGPGSFTGLRIGVGTVK
GLALATGRPVVGVSTLEALAFNGVDAGMMICPMMDAQKNQIYTALYFPGSGYSLKRIGDERSTDLQTFLVSIDENVLFIG
DGALKHRDRISEFLPSQSCFAAPHLHAVRASSVGLLGLKYHERGETLDLLTFTPRYLRLSEAELKLAQQNIQAGPESENG

Sequences:

>Translated_240_residues
MMTLALDTSSKTVGIALLDGEEILAETFFNLNVNSSLLLLPAIEDMFRITNVSAEHIDLWACTVGPGSFTGLRIGVGTVK
GLALATGRPVVGVSTLEALAFNGVDAGMMICPMMDAQKNQIYTALYFPGSGYSLKRIGDERSTDLQTFLVSIDENVLFIG
DGALKHRDRISEFLPSQSCFAAPHLHAVRASSVGLLGLKYHERGETLDLLTFTPRYLRLSEAELKLAQQNIQAGPESENG
>Mature_240_residues
MMTLALDTSSKTVGIALLDGEEILAETFFNLNVNSSLLLLPAIEDMFRITNVSAEHIDLWACTVGPGSFTGLRIGVGTVK
GLALATGRPVVGVSTLEALAFNGVDAGMMICPMMDAQKNQIYTALYFPGSGYSLKRIGDERSTDLQTFLVSIDENVLFIG
DGALKHRDRISEFLPSQSCFAAPHLHAVRASSVGLLGLKYHERGETLDLLTFTPRYLRLSEAELKLAQQNIQAGPESENG

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=128, Percent_Identity=32.8125, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25923; Mature: 25923

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLALDTSSKTVGIALLDGEEILAETFFNLNVNSSLLLLPAIEDMFRITNVSAEHIDLW
CEEEEEECCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCEEEE
ACTVGPGSFTGLRIGVGTVKGLALATGRPVVGVSTLEALAFNGVDAGMMICPMMDAQKNQ
EEEECCCCCCEEEEECCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCCE
IYTALYFPGSGYSLKRIGDERSTDLQTFLVSIDENVLFIGDGALKHRDRISEFLPSQSCF
EEEEEEECCCCCCHHCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCC
AAPHLHAVRASSVGLLGLKYHERGETLDLLTFTPRYLRLSEAELKLAQQNIQAGPESENG
CCCCCEEEHHCCCEEEEEEECCCCCEEEEEEECCHHEEECHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMTLALDTSSKTVGIALLDGEEILAETFFNLNVNSSLLLLPAIEDMFRITNVSAEHIDLW
CEEEEEECCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCEEEE
ACTVGPGSFTGLRIGVGTVKGLALATGRPVVGVSTLEALAFNGVDAGMMICPMMDAQKNQ
EEEECCCCCCEEEEECCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCCE
IYTALYFPGSGYSLKRIGDERSTDLQTFLVSIDENVLFIGDGALKHRDRISEFLPSQSCF
EEEEEEECCCCCCHHCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCC
AAPHLHAVRASSVGLLGLKYHERGETLDLLTFTPRYLRLSEAELKLAQQNIQAGPESENG
CCCCCEEEHHCCCEEEEEEECCCCCEEEEEEECCHHEEECHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]