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The map label for this gene is 85859035

Identifier: 85859035

GI number: 85859035

Start: 1212082

End: 1212927

Strand: Direct

Name: 85859035

Synonym: SYN_00968

Alternate gene names: NA

Gene position: 1212082-1212927 (Clockwise)

Preceding gene: 85859034

Following gene: 85859036

Centisome position: 38.12

GC content: 45.63

Gene sequence:

>846_bases
ATGATAAATCAGTTAATGCGATCGGTCGATAATCTTCCTGCGTTTCCTGTTACCGTCATCAAGGTAATGGATCTCTTGTC
ACGCGACGACTATTCCATAGCTGAAGTTGCCAGAGTGATCAGTTTCGATCAATCAATTACAGCTAATATCCTTAAAGTAA
GCAATTCCGCCTATTTCAGTTTCGGTCGCCCAATAAGGACCGTTCTTGAGGCCGTGGCCCGCCTCGGGAAGGAAAATGTC
ATTCGTGCTGTGCAGACAGCAGGAATATCAAAATTCTACAAAACAACCGCCAGGGGATACGTATCTGTCGCAGCTGACTT
GTGGGAACATTCCGTCGCGGTAGCCCTGATGTCCCAGATTTTATCCCGGCGGATATATGGGCGGGAAGATTCAGTTCTCT
ATTCGGCTGCGCTTCTTCATGACGTGGGAAAAATCATTATCGGGGCGTATGTCTATGAATCTCTTGAAAAGATTCAACGT
GTGGTCGACGGGCGGAAATGTTCCTTTATTGAAGCCGAAGAAGAAGTGATCGGTATCAATCACGCGGAATTGGGTGGAAA
GATCACAGGGTACTGGAACTTACCGGAAGAAATCTGTGATGCGATTGCCTTTCATCATCGTCCGGACATCCTGGATAAAA
ATTCAGTCGACATGCAATGGATTGTTTATCTGGCGGATCAGCTGTGCATGATGACGGGAATCGGTAATGGAATCGACGGG
CTTGCTTATCTGGGGATCAGTGAGGTTCTCAAAAAATTTAATCTTCGTGAAAAAGATCTGGAAACAAACATGATGAACTT
GATGGATGATCTTCGGAATGCCCGAAGCATTTTAGACATGGTTTAG

Upstream 100 bases:

>100_bases
GGGAGGATACGGGCAGCAACTGCAATCGAACCGTACGCCTGGAGATCAAAACGGGCAAGGTTTTTGTCAAGAGTTCGGGT
GGACCATTAAGGGAATTGTA

Downstream 100 bases:

>100_bases
AATAGATATGCAGTGCGACGCAGTCGCCAGAGGTGCTTATGTCCTTCAATGTGATGATTGTGGATGATTCCAACGCAATG
CGCGGGGTTATCAGAAAGAT

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MINQLMRSVDNLPAFPVTVIKVMDLLSRDDYSIAEVARVISFDQSITANILKVSNSAYFSFGRPIRTVLEAVARLGKENV
IRAVQTAGISKFYKTTARGYVSVAADLWEHSVAVALMSQILSRRIYGREDSVLYSAALLHDVGKIIIGAYVYESLEKIQR
VVDGRKCSFIEAEEEVIGINHAELGGKITGYWNLPEEICDAIAFHHRPDILDKNSVDMQWIVYLADQLCMMTGIGNGIDG
LAYLGISEVLKKFNLREKDLETNMMNLMDDLRNARSILDMV

Sequences:

>Translated_281_residues
MINQLMRSVDNLPAFPVTVIKVMDLLSRDDYSIAEVARVISFDQSITANILKVSNSAYFSFGRPIRTVLEAVARLGKENV
IRAVQTAGISKFYKTTARGYVSVAADLWEHSVAVALMSQILSRRIYGREDSVLYSAALLHDVGKIIIGAYVYESLEKIQR
VVDGRKCSFIEAEEEVIGINHAELGGKITGYWNLPEEICDAIAFHHRPDILDKNSVDMQWIVYLADQLCMMTGIGNGIDG
LAYLGISEVLKKFNLREKDLETNMMNLMDDLRNARSILDMV
>Mature_281_residues
MINQLMRSVDNLPAFPVTVIKVMDLLSRDDYSIAEVARVISFDQSITANILKVSNSAYFSFGRPIRTVLEAVARLGKENV
IRAVQTAGISKFYKTTARGYVSVAADLWEHSVAVALMSQILSRRIYGREDSVLYSAALLHDVGKIIIGAYVYESLEKIQR
VVDGRKCSFIEAEEEVIGINHAELGGKITGYWNLPEEICDAIAFHHRPDILDKNSVDMQWIVYLADQLCMMTGIGNGIDG
LAYLGISEVLKKFNLREKDLETNMMNLMDDLRNARSILDMV

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 31473; Mature: 31473

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQLMRSVDNLPAFPVTVIKVMDLLSRDDYSIAEVARVISFDQSITANILKVSNSAYFS
CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHH
FGRPIRTVLEAVARLGKENVIRAVQTAGISKFYKTTARGYVSVAADLWEHSVAVALMSQI
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRRIYGREDSVLYSAALLHDVGKIIIGAYVYESLEKIQRVVDGRKCSFIEAEEEVIGIN
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHCCC
HAELGGKITGYWNLPEEICDAIAFHHRPDILDKNSVDMQWIVYLADQLCMMTGIGNGIDG
HHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
LAYLGISEVLKKFNLREKDLETNMMNLMDDLRNARSILDMV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINQLMRSVDNLPAFPVTVIKVMDLLSRDDYSIAEVARVISFDQSITANILKVSNSAYFS
CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHH
FGRPIRTVLEAVARLGKENVIRAVQTAGISKFYKTTARGYVSVAADLWEHSVAVALMSQI
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRRIYGREDSVLYSAALLHDVGKIIIGAYVYESLEKIQRVVDGRKCSFIEAEEEVIGIN
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHCCC
HAELGGKITGYWNLPEEICDAIAFHHRPDILDKNSVDMQWIVYLADQLCMMTGIGNGIDG
HHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
LAYLGISEVLKKFNLREKDLETNMMNLMDDLRNARSILDMV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]