| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is cheY [H]
Identifier: 85859036
GI number: 85859036
Start: 1212960
End: 1213397
Strand: Direct
Name: cheY [H]
Synonym: SYN_00967
Alternate gene names: 85859036
Gene position: 1212960-1213397 (Clockwise)
Preceding gene: 85859035
Following gene: 85859037
Centisome position: 38.15
GC content: 44.29
Gene sequence:
>438_bases GTGCTTATGTCCTTCAATGTGATGATTGTGGATGATTCCAACGCAATGCGCGGGGTTATCAGAAAGATTATTGCCATGTC CGGTTTTAAAATGGATGCATGTCTTGAAGCGGGCAATGGGAAGGAAGCGATGACTCTGCTGGATTCCAACTGGGTCGATG TGATCCTGTCGGATATCAATATGCCGGAAATGAATGGCCTCGAATTGCTAAGCCGTCTTAAACAGGATGATCTGTTCAAA GAGATTCCCGTTATCATGATTACAACGGAAGGAAGCAGTCCGAGGATGGAAGAGGCTTTTCGATACGGGGCGAAAGGTTT TATAAAAAAGCCATTTTTACCTGGGGACTTGAAAAAAGTTCTTCATGAAGTGTTAGGGGTCAATGACGATGGAGACTATG GATCAGATGAAGAAGGTGATAGCGACCTCGATTTTTGA
Upstream 100 bases:
>100_bases TGGAAACAAACATGATGAACTTGATGGATGATCTTCGGAATGCCCGAAGCATTTTAGACATGGTTTAGAATAGATATGCA GTGCGACGCAGTCGCCAGAG
Downstream 100 bases:
>100_bases AGTTTTCGAAAAAATGTTTTTTATTTTTCTTGAACCCGTGGAGAAAAAAAATGACCTCACGTTTGACATGGAAACAGAAA TCAAATTTACAGGCTCTGCT
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLMSFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLLDSNWVDVILSDINMPEMNGLELLSRLKQDDLFK EIPVIMITTEGSSPRMEEAFRYGAKGFIKKPFLPGDLKKVLHEVLGVNDDGDYGSDEEGDSDLDF
Sequences:
>Translated_145_residues MLMSFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLLDSNWVDVILSDINMPEMNGLELLSRLKQDDLFK EIPVIMITTEGSSPRMEEAFRYGAKGFIKKPFLPGDLKKVLHEVLGVNDDGDYGSDEEGDSDLDF >Mature_145_residues MLMSFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLLDSNWVDVILSDINMPEMNGLELLSRLKQDDLFK EIPVIMITTEGSSPRMEEAFRYGAKGFIKKPFLPGDLKKVLHEVLGVNDDGDYGSDEEGDSDLDF
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=33.0508474576271, Blast_Score=77, Evalue=6e-16, Organism=Escherichia coli, GI1790299, Length=106, Percent_Identity=36.7924528301887, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1786599, Length=115, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1790102, Length=120, Percent_Identity=31.6666666666667, Blast_Score=63, Evalue=8e-12, Organism=Escherichia coli, GI1788222, Length=121, Percent_Identity=29.7520661157025, Blast_Score=60, Evalue=4e-11, Organism=Escherichia coli, GI145693157, Length=115, Percent_Identity=28.695652173913, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16116; Mature: 16116
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLLDSNWVDVILSDIN CEEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHCCC MPEMNGLELLSRLKQDDLFKEIPVIMITTEGSSPRMEEAFRYGAKGFIKKPFLPGDLKKV CCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH LHEVLGVNDDGDYGSDEEGDSDLDF HHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLMSFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLLDSNWVDVILSDIN CEEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHCCC MPEMNGLELLSRLKQDDLFKEIPVIMITTEGSSPRMEEAFRYGAKGFIKKPFLPGDLKKV CCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH LHEVLGVNDDGDYGSDEEGDSDLDF HHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]