Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yegE [C]

Identifier: 85858959

GI number: 85858959

Start: 1140086

End: 1141681

Strand: Direct

Name: yegE [C]

Synonym: SYN_00566

Alternate gene names: 85858959

Gene position: 1140086-1141681 (Clockwise)

Preceding gene: 85858958

Following gene: 85858961

Centisome position: 35.86

GC content: 50.88

Gene sequence:

>1596_bases
ATGATCGCGACGTTCTGGCGACAGGTCTCGGTTATCCCGTCGTGCCCAGAGGGGATGAGGAACTCCGGTTCCAGATCTCC
GCGGAGCATACCGAAAGAGACATCGGTTATCTGCTGGATGTTTTGTGAAAGAGAAAACTCGATGAGCGAGGAGTTCGAAA
ACCGGGAACAATTGCTGGACGAGATTTCATCGCTGCGTCAGCGCGTTAAGGAACTTGAAGTATCCGTTGCATCGCATAAA
CAGAGCGAGGAACGCTATCGTCGGCTTTATGATCGCATGCTTCATGATGAGGGCATGGATGGATATGCCGCGATCAATAT
GGATGGTTATTTCCGAGTGTCCAATGCGGCCTTCATGAAGATGGTCGGATATACGGCTGAGGAACTGCGGGGAATGATCT
ACCTGGATCTGACACCTGAGAAGTGGCGCGAGACGGAAAGAGTCATCATTCAGGAACAGGTCCTTTCCGAAAATTTTTCC
CAGGTTTATGAAAAGGAGTTACGACGGAAGGATGGGTCCGTCTTCCCTGTCGAACTCCGCACTTATCTGATCAGAAGCCG
GAACGGCCAGCCATCCGGAATGTGGGCATTCGTTCGGGACATTACAGTGCGCAAGCAATCGGAAAATATTCTGGTCGCTC
AACGGGATTTGTCCCTCGCACTGGCCGGTACAAAGTCGCTCCAGGATACCCTTCAGCTCTGTCTCGATACCGCCATTCAA
GCGTCGGGTTTTGATTCCGGCGGGATCTATATTTTGGATTCCAGGAAGAAGAGTCTTGATCTTGCCTGTGTCCGGAATCT
TTCGGATGAGTTTGTCGACTCCATCAACCATGTTCCCGCCGATTCAGAGAGGGCTCGGGTTGTGATGGCGGGCAGCCCCT
GCTATCTTGAAGGAGCGGATTGCGACGGGGTCCTGAAGCAGGAGCACTTCGTCAGAGAAGGAATAAAATCGTGTTCCATC
ATCCCGATCAGCAGTCAGGAACGGATTATCGCCTGCCTGAATGTTGCGTCTCATGTGCTCGAAAAAATTCCACCTTACGC
GCGCAACGCGCTGGAATCGATAGCGGGTCAGATTGGTCTTTGCATTCAGAAGGCTCAGGCCGAAGAAGAGTTGAGGGACA
GCGAAAAAAAGTACAGACAACTGGTTGATTTTCTTCCAATAATTGTCTTCGAGTGTGATAAGCGGGGAAATATTACCTCC
ACAAATCGAGCTGCATTTAAAGCCTTTGGGTATACTCAGGAGGATCTTGGCCCAGGGTTTAATGCCCTGCAGGTCATTGT
CCCCGAGGAGAAGGAACGAGCACTGCACAATATTCAGAGGCGCATTAATGACGAAGATGTCGACACAATTGAATACACAG
CCGTGAGGAAGGACGGTACCACCTTCCCAGTCCGGATTTTATCGGCGCCGATTATCAGGAATAACAAGGCAGTTGGTTTG
AGAGGGGCCATCATCGATATGACCGAAATCAAACTGGCCCGGAAGGCACTGCAGGAAAGCGAAGAACGCTGGCAGTTTGC
CTTGGAAGGATCAGGTGACGGTGTCTGGGACTGGAACAAACAAACCGGAGAGGTTTTTTATGGTTCATCCGACTAA

Upstream 100 bases:

>100_bases
TTTCGGGATTGCGGCCGCGAAACCCTGGACGGCGAACACCCCATCGTTCCCCTCCTGATTCGGGATACCGCAAAAACCAG
GGAACTGGTTCAGCGGCTTT

Downstream 100 bases:

>100_bases
AGCGTACTTGGCTTCATGAATGGCCATGATTTTAAGTTTGAAGAATTCGATATCCCGGAACCCATAAGCCATCCGTTTCA
TGGTTTTGATTTTGTTGTTT

Product: sensory transduction protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; Signal Transduction Histidine Kinase; Sensory Transduction Histidine Kinase; Two-Component Hybrid Sensor And Regulator; PAS Sensor Protein; Two-Component Sensor Histidine Kinase Protein; PAS Fold Family; Signal Transduction Protein; Signaling Protein; Sensor Histidine Kinase; Signal Transduction Histidine Kinase Lyts; Histidine Kinase; Sensor Protein FixL; PAS/PAC And GAF Sensors-Containing Diguanylate Cyclase; Diguanylate Cyclase With PAS/PAC Sensor; Sensory Transduction Protein Kinase; HD-GYP Domain-Containing Protein; Two Component Sensor Histidine Kinase; Two-Component Sensor Protein; Iron Dependent Repressor; Multi-PAS Sensor; Multi-Sensor Protein; Histidine Kinase Sensor Protein; Sensory Protein; Two-Component Hybrid Sensor Kinase/Response Regulator; Sensory Transduction Protein; PAS Modulated; Hybrid Histidine Kinase

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MIATFWRQVSVIPSCPEGMRNSGSRSPRSIPKETSVICWMFCERENSMSEEFENREQLLDEISSLRQRVKELEVSVASHK
QSEERYRRLYDRMLHDEGMDGYAAINMDGYFRVSNAAFMKMVGYTAEELRGMIYLDLTPEKWRETERVIIQEQVLSENFS
QVYEKELRRKDGSVFPVELRTYLIRSRNGQPSGMWAFVRDITVRKQSENILVAQRDLSLALAGTKSLQDTLQLCLDTAIQ
ASGFDSGGIYILDSRKKSLDLACVRNLSDEFVDSINHVPADSERARVVMAGSPCYLEGADCDGVLKQEHFVREGIKSCSI
IPISSQERIIACLNVASHVLEKIPPYARNALESIAGQIGLCIQKAQAEEELRDSEKKYRQLVDFLPIIVFECDKRGNITS
TNRAAFKAFGYTQEDLGPGFNALQVIVPEEKERALHNIQRRINDEDVDTIEYTAVRKDGTTFPVRILSAPIIRNNKAVGL
RGAIIDMTEIKLARKALQESEERWQFALEGSGDGVWDWNKQTGEVFYGSSD

Sequences:

>Translated_531_residues
MIATFWRQVSVIPSCPEGMRNSGSRSPRSIPKETSVICWMFCERENSMSEEFENREQLLDEISSLRQRVKELEVSVASHK
QSEERYRRLYDRMLHDEGMDGYAAINMDGYFRVSNAAFMKMVGYTAEELRGMIYLDLTPEKWRETERVIIQEQVLSENFS
QVYEKELRRKDGSVFPVELRTYLIRSRNGQPSGMWAFVRDITVRKQSENILVAQRDLSLALAGTKSLQDTLQLCLDTAIQ
ASGFDSGGIYILDSRKKSLDLACVRNLSDEFVDSINHVPADSERARVVMAGSPCYLEGADCDGVLKQEHFVREGIKSCSI
IPISSQERIIACLNVASHVLEKIPPYARNALESIAGQIGLCIQKAQAEEELRDSEKKYRQLVDFLPIIVFECDKRGNITS
TNRAAFKAFGYTQEDLGPGFNALQVIVPEEKERALHNIQRRINDEDVDTIEYTAVRKDGTTFPVRILSAPIIRNNKAVGL
RGAIIDMTEIKLARKALQESEERWQFALEGSGDGVWDWNKQTGEVFYGSSD
>Mature_531_residues
MIATFWRQVSVIPSCPEGMRNSGSRSPRSIPKETSVICWMFCERENSMSEEFENREQLLDEISSLRQRVKELEVSVASHK
QSEERYRRLYDRMLHDEGMDGYAAINMDGYFRVSNAAFMKMVGYTAEELRGMIYLDLTPEKWRETERVIIQEQVLSENFS
QVYEKELRRKDGSVFPVELRTYLIRSRNGQPSGMWAFVRDITVRKQSENILVAQRDLSLALAGTKSLQDTLQLCLDTAIQ
ASGFDSGGIYILDSRKKSLDLACVRNLSDEFVDSINHVPADSERARVVMAGSPCYLEGADCDGVLKQEHFVREGIKSCSI
IPISSQERIIACLNVASHVLEKIPPYARNALESIAGQIGLCIQKAQAEEELRDSEKKYRQLVDFLPIIVFECDKRGNITS
TNRAAFKAFGYTQEDLGPGFNALQVIVPEEKERALHNIQRRINDEDVDTIEYTAVRKDGTTFPVRILSAPIIRNNKAVGL
RGAIIDMTEIKLARKALQESEERWQFALEGSGDGVWDWNKQTGEVFYGSSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60309; Mature: 60309

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATFWRQVSVIPSCPEGMRNSGSRSPRSIPKETSVICWMFCERENSMSEEFENREQLLD
CCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
EISSLRQRVKELEVSVASHKQSEERYRRLYDRMLHDEGMDGYAAINMDGYFRVSNAAFMK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHH
MVGYTAEELRGMIYLDLTPEKWRETERVIIQEQVLSENFSQVYEKELRRKDGSVFPVELR
HHCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
TYLIRSRNGQPSGMWAFVRDITVRKQSENILVAQRDLSLALAGTKSLQDTLQLCLDTAIQ
HHHHHCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHH
ASGFDSGGIYILDSRKKSLDLACVRNLSDEFVDSINHVPADSERARVVMAGSPCYLEGAD
HCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCC
CDGVLKQEHFVREGIKSCSIIPISSQERIIACLNVASHVLEKIPPYARNALESIAGQIGL
CCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
CIQKAQAEEELRDSEKKYRQLVDFLPIIVFECDKRGNITSTNRAAFKAFGYTQEDLGPGF
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHCCCCHHHHCCCC
NALQVIVPEEKERALHNIQRRINDEDVDTIEYTAVRKDGTTFPVRILSAPIIRNNKAVGL
CEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCEE
RGAIIDMTEIKLARKALQESEERWQFALEGSGDGVWDWNKQTGEVFYGSSD
CEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MIATFWRQVSVIPSCPEGMRNSGSRSPRSIPKETSVICWMFCERENSMSEEFENREQLLD
CCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
EISSLRQRVKELEVSVASHKQSEERYRRLYDRMLHDEGMDGYAAINMDGYFRVSNAAFMK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHH
MVGYTAEELRGMIYLDLTPEKWRETERVIIQEQVLSENFSQVYEKELRRKDGSVFPVELR
HHCCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
TYLIRSRNGQPSGMWAFVRDITVRKQSENILVAQRDLSLALAGTKSLQDTLQLCLDTAIQ
HHHHHCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHH
ASGFDSGGIYILDSRKKSLDLACVRNLSDEFVDSINHVPADSERARVVMAGSPCYLEGAD
HCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCC
CDGVLKQEHFVREGIKSCSIIPISSQERIIACLNVASHVLEKIPPYARNALESIAGQIGL
CCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
CIQKAQAEEELRDSEKKYRQLVDFLPIIVFECDKRGNITSTNRAAFKAFGYTQEDLGPGF
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHCCCCHHHHCCCC
NALQVIVPEEKERALHNIQRRINDEDVDTIEYTAVRKDGTTFPVRILSAPIIRNNKAVGL
CEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCEE
RGAIIDMTEIKLARKALQESEERWQFALEGSGDGVWDWNKQTGEVFYGSSD
CEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA