| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is kbl [C]
Identifier: 85858958
GI number: 85858958
Start: 1138960
End: 1140213
Strand: Direct
Name: kbl [C]
Synonym: SYN_00565
Alternate gene names: 85858958
Gene position: 1138960-1140213 (Clockwise)
Preceding gene: 85858957
Following gene: 85858959
Centisome position: 35.82
GC content: 60.77
Gene sequence:
>1254_bases TTGAACATCTTGCATTCAAACTGGGAAAAGCGGGGGAGGATCGACATGGCGCAGGATAAACTGAAACGCCTGCTGGTGGA GAAGCTGGATGCGATGGAACGAAACGGCGTCCGCAAGGGGAAAGAAAGAATCATCACCGGCCGCCGGCCGCCCCGCGACG GCTTCGGTCCGAGATATTTTCTCAAGAGCTGTGGGGGGCGGGCTTTTCTACGTATGAATGCCAATGCCTACCTCGGCCTC AACACCCACCCTCGCGTGGTGGAAGCGGAAGAAACTGCCGTCCGGCGCTACGGCGCGGGACCCGGTGCGGTACGCTTCAT CAGCGGCACCTTCGAACCCCACATCAAGCTGGAAGAGCGCCTGGCCTCTTTCCACGGGCGGGAAGCGGGAATGCTGTTCA GTGCCGCCTACGCAGCAGTCATGGGCGTGCTGCCGCAGCTTGTCACCGGGGAGACCCTGGTGGTGAGCGACGCCCTCAAC CATAACTGCATCATCAACGCCGTCCGTCTGGCCCAGCCCGCCGCCAGAGCGGTTTATGAACACCTGGACACCGCCCGGCT GGAAGGCCTCCTGGAGCAGTATCTGGGAAAGGCCAAGAGGGTCGTTGTCGTCACCGACGGTGTCTTCAGCATGCGCGGCG ACTACGCCCCCCTGGACGTAATCTGTGCGATCTGCAGGCGTTATTCCGAGCTTTTTGAGGAAGGGGTGATTTCCGTTGTT GATGACTCTCACGGCGTCGGCGCCTTCGGAGAGACCGGCAGGGGAAGCGAGGAAAAAACGGCGGCGCGGGCCGACATCCT CATTGCCACGCTGGGCAAGGCGCTCGGCGTCAACGGTGGCTATGTGGTGTCTGACAGGACGGTCATCGACTACCTGCGGG AAACCGCTCCCTTCTACATTTACTCCAATCCGATTACTCCTTCGGAAGCGGCCGCCGCCCTTGCGGCGCTGGAAATACTC GACAGCGGCGAGGGAATCGGTCTGCTGAAAAAAATCCGGGACCTTGCCGCCTCCCTGCGCCGGGGTTTTCGGGATTGCGG CCGCGAAACCCTGGACGGCGAACACCCCATCGTTCCCCTCCTGATTCGGGATACCGCAAAAACCAGGGAACTGGTTCAGC GGCTTTATGATCGCGACGTTCTGGCGACAGGTCTCGGTTATCCCGTCGTGCCCAGAGGGGATGAGGAACTCCGGTTCCAG ATCTCCGCGGAGCATACCGAAAGAGACATCGGTTATCTGCTGGATGTTTTGTGA
Upstream 100 bases:
>100_bases ATTGCCGATTCCTGGCCCCGGCACATGGATGACAGCGCGGCGCGTACGGAATGGGGCTGGCAGCCCCGTTACGACCTTGC CGCCACGACATCGGAAATGA
Downstream 100 bases:
>100_bases AAGAGAAAACTCGATGAGCGAGGAGTTCGAAAACCGGGAACAATTGCTGGACGAGATTTCATCGCTGCGTCAGCGCGTTA AGGAACTTGAAGTATCCGTT
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNILHSNWEKRGRIDMAQDKLKRLLVEKLDAMERNGVRKGKERIITGRRPPRDGFGPRYFLKSCGGRAFLRMNANAYLGL NTHPRVVEAEETAVRRYGAGPGAVRFISGTFEPHIKLEERLASFHGREAGMLFSAAYAAVMGVLPQLVTGETLVVSDALN HNCIINAVRLAQPAARAVYEHLDTARLEGLLEQYLGKAKRVVVVTDGVFSMRGDYAPLDVICAICRRYSELFEEGVISVV DDSHGVGAFGETGRGSEEKTAARADILIATLGKALGVNGGYVVSDRTVIDYLRETAPFYIYSNPITPSEAAAALAALEIL DSGEGIGLLKKIRDLAASLRRGFRDCGRETLDGEHPIVPLLIRDTAKTRELVQRLYDRDVLATGLGYPVVPRGDEELRFQ ISAEHTERDIGYLLDVL
Sequences:
>Translated_417_residues MNILHSNWEKRGRIDMAQDKLKRLLVEKLDAMERNGVRKGKERIITGRRPPRDGFGPRYFLKSCGGRAFLRMNANAYLGL NTHPRVVEAEETAVRRYGAGPGAVRFISGTFEPHIKLEERLASFHGREAGMLFSAAYAAVMGVLPQLVTGETLVVSDALN HNCIINAVRLAQPAARAVYEHLDTARLEGLLEQYLGKAKRVVVVTDGVFSMRGDYAPLDVICAICRRYSELFEEGVISVV DDSHGVGAFGETGRGSEEKTAARADILIATLGKALGVNGGYVVSDRTVIDYLRETAPFYIYSNPITPSEAAAALAALEIL DSGEGIGLLKKIRDLAASLRRGFRDCGRETLDGEHPIVPLLIRDTAKTRELVQRLYDRDVLATGLGYPVVPRGDEELRFQ ISAEHTERDIGYLLDVL >Mature_417_residues MNILHSNWEKRGRIDMAQDKLKRLLVEKLDAMERNGVRKGKERIITGRRPPRDGFGPRYFLKSCGGRAFLRMNANAYLGL NTHPRVVEAEETAVRRYGAGPGAVRFISGTFEPHIKLEERLASFHGREAGMLFSAAYAAVMGVLPQLVTGETLVVSDALN HNCIINAVRLAQPAARAVYEHLDTARLEGLLEQYLGKAKRVVVVTDGVFSMRGDYAPLDVICAICRRYSELFEEGVISVV DDSHGVGAFGETGRGSEEKTAARADILIATLGKALGVNGGYVVSDRTVIDYLRETAPFYIYSNPITPSEAAAALAALEIL DSGEGIGLLKKIRDLAASLRRGFRDCGRETLDGEHPIVPLLIRDTAKTRELVQRLYDRDVLATGLGYPVVPRGDEELRFQ ISAEHTERDIGYLLDVL
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=411, Percent_Identity=36.7396593673966, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI284448556, Length=430, Percent_Identity=35.8139534883721, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI4502025, Length=350, Percent_Identity=32.2857142857143, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI40316939, Length=350, Percent_Identity=32.2857142857143, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI83977442, Length=341, Percent_Identity=31.9648093841642, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI83977444, Length=341, Percent_Identity=31.9648093841642, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI83977440, Length=341, Percent_Identity=31.9648093841642, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI119220554, Length=365, Percent_Identity=26.8493150684932, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI4758668, Length=358, Percent_Identity=27.3743016759777, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI5454084, Length=345, Percent_Identity=26.3768115942029, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1790046, Length=394, Percent_Identity=35.5329949238579, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI1786993, Length=351, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71994529, Length=398, Percent_Identity=34.9246231155779, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI32566772, Length=370, Percent_Identity=27.5675675675676, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17560912, Length=323, Percent_Identity=27.2445820433437, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17560914, Length=323, Percent_Identity=27.2445820433437, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71982625, Length=366, Percent_Identity=25.6830601092896, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI71982617, Length=366, Percent_Identity=25.6830601092896, Blast_Score=98, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320438, Length=361, Percent_Identity=29.0858725761773, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6320267, Length=373, Percent_Identity=28.4182305630027, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6323954, Length=287, Percent_Identity=27.1777003484321, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24662918, Length=398, Percent_Identity=35.1758793969849, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI17137420, Length=339, Percent_Identity=31.2684365781711, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI17136286, Length=367, Percent_Identity=29.4277929155313, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI24653280, Length=348, Percent_Identity=24.7126436781609, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24653276, Length=348, Percent_Identity=24.7126436781609, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24653278, Length=348, Percent_Identity=24.7126436781609, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 45908; Mature: 45908
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILHSNWEKRGRIDMAQDKLKRLLVEKLDAMERNGVRKGKERIITGRRPPRDGFGPRYF CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCHHHH LKSCGGRAFLRMNANAYLGLNTHPRVVEAEETAVRRYGAGPGAVRFISGTFEPHIKLEER HHHCCCCEEEEECCCEEEECCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH LASFHGREAGMLFSAAYAAVMGVLPQLVTGETLVVSDALNHNCIINAVRLAQPAARAVYE HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH HLDTARLEGLLEQYLGKAKRVVVVTDGVFSMRGDYAPLDVICAICRRYSELFEEGVISVV HHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE DDSHGVGAFGETGRGSEEKTAARADILIATLGKALGVNGGYVVSDRTVIDYLRETAPFYI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCEEE YSNPITPSEAAAALAALEILDSGEGIGLLKKIRDLAASLRRGFRDCGRETLDGEHPIVPL EECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEE LIRDTAKTRELVQRLYDRDVLATGLGYPVVPRGDEELRFQISAEHTERDIGYLLDVL EECCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHEEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure MNILHSNWEKRGRIDMAQDKLKRLLVEKLDAMERNGVRKGKERIITGRRPPRDGFGPRYF CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCHHHH LKSCGGRAFLRMNANAYLGLNTHPRVVEAEETAVRRYGAGPGAVRFISGTFEPHIKLEER HHHCCCCEEEEECCCEEEECCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH LASFHGREAGMLFSAAYAAVMGVLPQLVTGETLVVSDALNHNCIINAVRLAQPAARAVYE HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH HLDTARLEGLLEQYLGKAKRVVVVTDGVFSMRGDYAPLDVICAICRRYSELFEEGVISVV HHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE DDSHGVGAFGETGRGSEEKTAARADILIATLGKALGVNGGYVVSDRTVIDYLRETAPFYI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCEEE YSNPITPSEAAAALAALEILDSGEGIGLLKKIRDLAASLRRGFRDCGRETLDGEHPIVPL EECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEE LIRDTAKTRELVQRLYDRDVLATGLGYPVVPRGDEELRFQISAEHTERDIGYLLDVL EECCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHEEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA