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The map label for this gene is pdaD [H]

Identifier: 85858945

GI number: 85858945

Start: 1126957

End: 1127553

Strand: Direct

Name: pdaD [H]

Synonym: SYN_01365

Alternate gene names: 85858945

Gene position: 1126957-1127553 (Clockwise)

Preceding gene: 85858944

Following gene: 85858946

Centisome position: 35.45

GC content: 49.58

Gene sequence:

>597_bases
TTGTGCCCGGGATCAAAAGAACATCGATATATTAAGGAGCGAAAGCAGTTGAACAGCCTTGTCCCGAAAAAAATATTTTT
TACCAAAGGTGTGGGGACCCACAAGGAAGAACTGCACTCATTTGAACTGGCTCTTCGGGATGCCGGAATTGAAAAGTGCA
ATCTGGTTCAGGTGTCCAGCATATTGCCGCCCGGCTGTAAGGTCATTTCCCAGGGGATGGGGCTGAAGGAACTGAAGGCC
GGGTCCATTACCTATTGCGTCTTGAGTCGATGCAGCAGCAATGAGCCGAGGCGTTTGCTGGCGGCTTCCATTGGCTGTGC
AATTCCGACCGACAGGAATGCCTATGGATATATCAGTGAATATCACGCTTTCGGTCAAACGGAACGCCAGGCAGGCGATC
ATGCGGAGGACCTTGCCGCGGCCATGCTGGCTTCCACCCTCGGGATTGATTTCAATATTGACGAAAGCTGGGATGAAAAA
AAGGAGATTTTCAAAATCAGCGGAAAGATCGTCAGTACGAGAAACATTACCCAGTCCAGTATTGTAAAGAATGGAGGACA
CACGACCGTCATCGCCGTAGCCGTCTTTCTGTTTTAA

Upstream 100 bases:

>100_bases
TTCTTTTTTCGTAATGAATTTTCTTGTCACCTGAAGTGAACATAATGCTGGACTTATCTTGATTGATGTGTTAGCACGCC
CACAAATTTGATCGGGAGGT

Downstream 100 bases:

>100_bases
TTTTACCCCACCGGGGAATAATACAGGAACGGATGGCTTGTATCCTGCAAAGCTTGTTCTGCGTCATCAAAATCAAAGAG
AAAAAAATCAGGATTCAAAT

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MCPGSKEHRYIKERKQLNSLVPKKIFFTKGVGTHKEELHSFELALRDAGIEKCNLVQVSSILPPGCKVISQGMGLKELKA
GSITYCVLSRCSSNEPRRLLAASIGCAIPTDRNAYGYISEYHAFGQTERQAGDHAEDLAAAMLASTLGIDFNIDESWDEK
KEIFKISGKIVSTRNITQSSIVKNGGHTTVIAVAVFLF

Sequences:

>Translated_198_residues
MCPGSKEHRYIKERKQLNSLVPKKIFFTKGVGTHKEELHSFELALRDAGIEKCNLVQVSSILPPGCKVISQGMGLKELKA
GSITYCVLSRCSSNEPRRLLAASIGCAIPTDRNAYGYISEYHAFGQTERQAGDHAEDLAAAMLASTLGIDFNIDESWDEK
KEIFKISGKIVSTRNITQSSIVKNGGHTTVIAVAVFLF
>Mature_198_residues
MCPGSKEHRYIKERKQLNSLVPKKIFFTKGVGTHKEELHSFELALRDAGIEKCNLVQVSSILPPGCKVISQGMGLKELKA
GSITYCVLSRCSSNEPRRLLAASIGCAIPTDRNAYGYISEYHAFGQTERQAGDHAEDLAAAMLASTLGIDFNIDESWDEK
KEIFKISGKIVSTRNITQSSIVKNGGHTTVIAVAVFLF

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 21706; Mature: 21706

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPGSKEHRYIKERKQLNSLVPKKIFFTKGVGTHKEELHSFELALRDAGIEKCNLVQVSS
CCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHH
ILPPGCKVISQGMGLKELKAGSITYCVLSRCSSNEPRRLLAASIGCAIPTDRNAYGYISE
CCCCHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
YHAFGQTERQAGDHAEDLAAAMLASTLGIDFNIDESWDEKKEIFKISGKIVSTRNITQSS
HHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCCCHHH
IVKNGGHTTVIAVAVFLF
HHHCCCCHHHHHHHHHHC
>Mature Secondary Structure
MCPGSKEHRYIKERKQLNSLVPKKIFFTKGVGTHKEELHSFELALRDAGIEKCNLVQVSS
CCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHH
ILPPGCKVISQGMGLKELKAGSITYCVLSRCSSNEPRRLLAASIGCAIPTDRNAYGYISE
CCCCHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
YHAFGQTERQAGDHAEDLAAAMLASTLGIDFNIDESWDEKKEIFKISGKIVSTRNITQSS
HHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCCCHHH
IVKNGGHTTVIAVAVFLF
HHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA