| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is zraS [H]
Identifier: 85858946
GI number: 85858946
Start: 1127799
End: 1130057
Strand: Direct
Name: zraS [H]
Synonym: SYN_01364
Alternate gene names: 85858946
Gene position: 1127799-1130057 (Clockwise)
Preceding gene: 85858945
Following gene: 85858947
Centisome position: 35.47
GC content: 49.05
Gene sequence:
>2259_bases GTGATATGGAGTTGGACTTACCCTGTTCCCGCTGGAGTTGCGCACTTGAATACCTTGTTGATTTCTTACGGCGCGATTGT GCCGCCGGTCCTCGGTTTTTTCGTCTTAACGTTTATTTTCCTGATTGCCGTTCTCAGAGCTGAGAAAAATCAGACGAATA TCCTCTTCGCAGGAATCTGCTTTCTGGGAGCCATCATGAATGCCGATGTGGCCCTTGTGAATCTCATTTCCGACAAAATC CTTGCTCTGCAGATCGACCGCTGGACCTACCACCTTTTTGTTTTCAGCCTTCCTCTCTATATCCGGTTTGTTCATTCCTT CCTCGGAATCGGGCATCGCAAATGGATCGAAGGAATCGCTTACCTGTTCAGCCTTTCGCTGCTTTTCTTCATTTCTTCGG ATCTGTTCATCGCAGGCTTTCACCATTACTCTTTTGGCACAATCGCCAAGGCCGGTCCTGTTTTTCACGTCTTTTCGGCG GGAGTGGGATTCACGGTTTTTTACTGTCTGGTGGTCCTGTTGAAGGGGCTGAAGTCTGCCGACGACAACCATCAGAAAAA CAGAATCAAATACCTGATCGGTGGGATGGGCATAACGGCGCTGGTTCTTGCCCTGAATATTCTGCCTGTCAGCGGGATCG ACATGTACCCAATGGGAAATTTCAGTTTTCTGCCTGCCATATTTCTGGCTTTCGGAGTCCTGAAATACGATCTTTTTGAC ATGGGAGCCATGATTCGTCAGGGAACCAGCTATTTCATCCTGACCGGCGTTCTGACGCTTGTTTACATTTTTTTTATTTA TCTCTTCAATGCCCTTTTCCTGGCCTCAGGAGGAGGGCATTCCCTTCTGCCGCCCTTCCTCATGGCCCTGCTGATCGTCC TTTTTTTCAATCCTCTCCGCGACCGGGTACAGAAGACCATCGATAATCTTTTCTATCGGGGTAAATACGATTACCAGAAA CTCCTGGAGGAGATCAGCAGGGACATGGCTTCATTGCTTAAATTTGATCAGATTCGCGATCTGCTCCTGGAAAGAACTTC TTCCGTCCTGCAGTTATCCCGCGTCGATCTCCTCATGCTGAATGCGGCGGGTAATGGTTATTTTTATCAACATGCAGGCA ATCTATGTGAAGAAATTTCGGAGGATGGGTTTGACAGAAATCACCCCATCGTCCATTTTCTCGAAATATGTCGGGAGCCC CTGGATAAAGCCGTAGTCCATCGGCAACTGCATTCCCTGCCTGAGCGCCAGACCGAGGTCATCACGCTGTTCGATCGTCT TCATGCCGTTCTGATAATTCCTCTTCTGTCCCGTAATCGGTTGTTGGGGGTTATGGCGCTTGGTCAGAGAAAATCGGGGG AGCTTTTTGTTGAGGAGGACCGGCAGCTTTTAATGACCATTGCCAATCAGAGTGTTACGGCCATGGAACATGCCTGGGCT TATGAAAAAATATCCATGATGAATCTCGAGCTGGAAAGAAAGGTTGAAGAAAGAACCGCTGATTTGAGGCGCGTCCTGGA AGAGAAAGAGAGGACACAGGTGCAACTCATCCGGTCGGAAAGTCTGGCAGCCATCGGGCAACTCGTTGCCGGGGCGGCCC ATGAACTGAACAACCCGTTGAGCAGCGCCTACAGTTTGACGCAGACGACAGTGGAAACAATCGGATCGTGGGAGAACGTG AAGATCGAATTGCGCAATGAGGTGCTGGATGATCTTGATTTTTCACTCCGGGAGATGCGTCGTGCGCGCGACATCGTGCG GAGTCTTCTTGATTTGTCACGCCAGACCCAGAACTATATGGAATCAGTCAATCTTTCCGCTGTTATCGATAACGCCTTAC GGGTCCTCCATAATCAATACAAAAAAGATCCGATTGTCATCGAAAGAAATTATGAAGAGGATCTGCCGAACGTGCAGGGA AATTTTGCCAACCTGGGGCAGGTTTTCATCAACATGATCAAGAATGCCATCGAGGCGCTTCCGGACCGGCGCGGAACCAT TTCTCTGACCACCCGATATGACCGACTGGCGGACAAGGTCATTGTTCAGTGTCGCGACACGGGAGCGGGCATTTCTTCGG ATCAGTTAAAGGAAATTTTCAACCCCTTTTTTACTACGAAACCCGTAGGAAAAGGGACCGGCTTGGGATTGTATATTTCT CATGAAATCATCAAAAAACACGAGGGCTCCATTCGGGTCGAGAGCGAGAAAGGGAAGGGGACCATATTTAATATCGAAAT ACCGCGAAACAGGGAGTGA
Upstream 100 bases:
>100_bases CCAGATCTGAGAGAAACTCAAGGCGGCAAAATTAAGGCCGGCGCGGCCCACGAGTCGGCCTTTGTCGAGGAACTGACGTC AAGCCGACACCGGGAGTGCT
Downstream 100 bases:
>100_bases AAATGAACTATCTGATGGTTGTGGATGATGAGGAGGGTGTCAGGCGATCTCTGCGCAAGGTGCTTGCAAAGGATGGTTAT GAGGTGATCACGGCAGAAAC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 752; Mature: 752
Protein sequence:
>752_residues MIWSWTYPVPAGVAHLNTLLISYGAIVPPVLGFFVLTFIFLIAVLRAEKNQTNILFAGICFLGAIMNADVALVNLISDKI LALQIDRWTYHLFVFSLPLYIRFVHSFLGIGHRKWIEGIAYLFSLSLLFFISSDLFIAGFHHYSFGTIAKAGPVFHVFSA GVGFTVFYCLVVLLKGLKSADDNHQKNRIKYLIGGMGITALVLALNILPVSGIDMYPMGNFSFLPAIFLAFGVLKYDLFD MGAMIRQGTSYFILTGVLTLVYIFFIYLFNALFLASGGGHSLLPPFLMALLIVLFFNPLRDRVQKTIDNLFYRGKYDYQK LLEEISRDMASLLKFDQIRDLLLERTSSVLQLSRVDLLMLNAAGNGYFYQHAGNLCEEISEDGFDRNHPIVHFLEICREP LDKAVVHRQLHSLPERQTEVITLFDRLHAVLIIPLLSRNRLLGVMALGQRKSGELFVEEDRQLLMTIANQSVTAMEHAWA YEKISMMNLELERKVEERTADLRRVLEEKERTQVQLIRSESLAAIGQLVAGAAHELNNPLSSAYSLTQTTVETIGSWENV KIELRNEVLDDLDFSLREMRRARDIVRSLLDLSRQTQNYMESVNLSAVIDNALRVLHNQYKKDPIVIERNYEEDLPNVQG NFANLGQVFINMIKNAIEALPDRRGTISLTTRYDRLADKVIVQCRDTGAGISSDQLKEIFNPFFTTKPVGKGTGLGLYIS HEIIKKHEGSIRVESEKGKGTIFNIEIPRNRE
Sequences:
>Translated_752_residues MIWSWTYPVPAGVAHLNTLLISYGAIVPPVLGFFVLTFIFLIAVLRAEKNQTNILFAGICFLGAIMNADVALVNLISDKI LALQIDRWTYHLFVFSLPLYIRFVHSFLGIGHRKWIEGIAYLFSLSLLFFISSDLFIAGFHHYSFGTIAKAGPVFHVFSA GVGFTVFYCLVVLLKGLKSADDNHQKNRIKYLIGGMGITALVLALNILPVSGIDMYPMGNFSFLPAIFLAFGVLKYDLFD MGAMIRQGTSYFILTGVLTLVYIFFIYLFNALFLASGGGHSLLPPFLMALLIVLFFNPLRDRVQKTIDNLFYRGKYDYQK LLEEISRDMASLLKFDQIRDLLLERTSSVLQLSRVDLLMLNAAGNGYFYQHAGNLCEEISEDGFDRNHPIVHFLEICREP LDKAVVHRQLHSLPERQTEVITLFDRLHAVLIIPLLSRNRLLGVMALGQRKSGELFVEEDRQLLMTIANQSVTAMEHAWA YEKISMMNLELERKVEERTADLRRVLEEKERTQVQLIRSESLAAIGQLVAGAAHELNNPLSSAYSLTQTTVETIGSWENV KIELRNEVLDDLDFSLREMRRARDIVRSLLDLSRQTQNYMESVNLSAVIDNALRVLHNQYKKDPIVIERNYEEDLPNVQG NFANLGQVFINMIKNAIEALPDRRGTISLTTRYDRLADKVIVQCRDTGAGISSDQLKEIFNPFFTTKPVGKGTGLGLYIS HEIIKKHEGSIRVESEKGKGTIFNIEIPRNRE >Mature_752_residues MIWSWTYPVPAGVAHLNTLLISYGAIVPPVLGFFVLTFIFLIAVLRAEKNQTNILFAGICFLGAIMNADVALVNLISDKI LALQIDRWTYHLFVFSLPLYIRFVHSFLGIGHRKWIEGIAYLFSLSLLFFISSDLFIAGFHHYSFGTIAKAGPVFHVFSA GVGFTVFYCLVVLLKGLKSADDNHQKNRIKYLIGGMGITALVLALNILPVSGIDMYPMGNFSFLPAIFLAFGVLKYDLFD MGAMIRQGTSYFILTGVLTLVYIFFIYLFNALFLASGGGHSLLPPFLMALLIVLFFNPLRDRVQKTIDNLFYRGKYDYQK LLEEISRDMASLLKFDQIRDLLLERTSSVLQLSRVDLLMLNAAGNGYFYQHAGNLCEEISEDGFDRNHPIVHFLEICREP LDKAVVHRQLHSLPERQTEVITLFDRLHAVLIIPLLSRNRLLGVMALGQRKSGELFVEEDRQLLMTIANQSVTAMEHAWA YEKISMMNLELERKVEERTADLRRVLEEKERTQVQLIRSESLAAIGQLVAGAAHELNNPLSSAYSLTQTTVETIGSWENV KIELRNEVLDDLDFSLREMRRARDIVRSLLDLSRQTQNYMESVNLSAVIDNALRVLHNQYKKDPIVIERNYEEDLPNVQG NFANLGQVFINMIKNAIEALPDRRGTISLTTRYDRLADKVIVQCRDTGAGISSDQLKEIFNPFFTTKPVGKGTGLGLYIS HEIIKKHEGSIRVESEKGKGTIFNIEIPRNRE
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=34.2741935483871, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI1788549, Length=250, Percent_Identity=30.4, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1789149, Length=271, Percent_Identity=26.9372693726937, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI145693157, Length=125, Percent_Identity=37.6, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790300, Length=251, Percent_Identity=27.4900398406374, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48994928, Length=267, Percent_Identity=28.4644194756554, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87081816, Length=266, Percent_Identity=24.0601503759398, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 85208; Mature: 85208
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWSWTYPVPAGVAHLNTLLISYGAIVPPVLGFFVLTFIFLIAVLRAEKNQTNILFAGIC CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHH FLGAIMNADVALVNLISDKILALQIDRWTYHLFVFSLPLYIRFVHSFLGIGHRKWIEGIA HHHHHHCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YLFSLSLLFFISSDLFIAGFHHYSFGTIAKAGPVFHVFSAGVGFTVFYCLVVLLKGLKSA HHHHHHHHHHHHCCHHEEEEHHCCCCCHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC DDNHQKNRIKYLIGGMGITALVLALNILPVSGIDMYPMGNFSFLPAIFLAFGVLKYDLFD CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MGAMIRQGTSYFILTGVLTLVYIFFIYLFNALFLASGGGHSLLPPFLMALLIVLFFNPLR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH DRVQKTIDNLFYRGKYDYQKLLEEISRDMASLLKFDQIRDLLLERTSSVLQLSRVDLLML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE NAAGNGYFYQHAGNLCEEISEDGFDRNHPIVHFLEICREPLDKAVVHRQLHSLPERQTEV EECCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ITLFDRLHAVLIIPLLSRNRLLGVMALGQRKSGELFVEEDRQLLMTIANQSVTAMEHAWA HHHHHHHHHHHHHHHHCCCCEEEHHEECCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHH YEKISMMNLELERKVEERTADLRRVLEEKERTQVQLIRSESLAAIGQLVAGAAHELNNPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SSAYSLTQTTVETIGSWENVKIELRNEVLDDLDFSLREMRRARDIVRSLLDLSRQTQNYM HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESVNLSAVIDNALRVLHNQYKKDPIVIERNYEEDLPNVQGNFANLGQVFINMIKNAIEAL HHCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHC PDRRGTISLTTRYDRLADKVIVQCRDTGAGISSDQLKEIFNPFFTTKPVGKGTGLGLYIS CCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCEEEEE HEIIKKHEGSIRVESEKGKGTIFNIEIPRNRE HHHHHHCCCCEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MIWSWTYPVPAGVAHLNTLLISYGAIVPPVLGFFVLTFIFLIAVLRAEKNQTNILFAGIC CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHH FLGAIMNADVALVNLISDKILALQIDRWTYHLFVFSLPLYIRFVHSFLGIGHRKWIEGIA HHHHHHCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YLFSLSLLFFISSDLFIAGFHHYSFGTIAKAGPVFHVFSAGVGFTVFYCLVVLLKGLKSA HHHHHHHHHHHHCCHHEEEEHHCCCCCHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC DDNHQKNRIKYLIGGMGITALVLALNILPVSGIDMYPMGNFSFLPAIFLAFGVLKYDLFD CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MGAMIRQGTSYFILTGVLTLVYIFFIYLFNALFLASGGGHSLLPPFLMALLIVLFFNPLR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH DRVQKTIDNLFYRGKYDYQKLLEEISRDMASLLKFDQIRDLLLERTSSVLQLSRVDLLML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE NAAGNGYFYQHAGNLCEEISEDGFDRNHPIVHFLEICREPLDKAVVHRQLHSLPERQTEV EECCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ITLFDRLHAVLIIPLLSRNRLLGVMALGQRKSGELFVEEDRQLLMTIANQSVTAMEHAWA HHHHHHHHHHHHHHHHCCCCEEEHHEECCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHH YEKISMMNLELERKVEERTADLRRVLEEKERTQVQLIRSESLAAIGQLVAGAAHELNNPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SSAYSLTQTTVETIGSWENVKIELRNEVLDDLDFSLREMRRARDIVRSLLDLSRQTQNYM HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESVNLSAVIDNALRVLHNQYKKDPIVIERNYEEDLPNVQGNFANLGQVFINMIKNAIEAL HHCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHC PDRRGTISLTTRYDRLADKVIVQCRDTGAGISSDQLKEIFNPFFTTKPVGKGTGLGLYIS CCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCEEEEE HEIIKKHEGSIRVESEKGKGTIFNIEIPRNRE HHHHHHCCCCEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]