| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858898
Identifier: 85858898
GI number: 85858898
Start: 1079455
End: 1079907
Strand: Direct
Name: 85858898
Synonym: SYN_02111
Alternate gene names: NA
Gene position: 1079455-1079907 (Clockwise)
Preceding gene: 85858897
Following gene: 85858899
Centisome position: 33.95
GC content: 47.68
Gene sequence:
>453_bases ATGAAGTTGTGTAGGATTATGCTCGTGGCCGCTGTTTTATTTTTTCTATCTTCATCAATCTCTGTGGCAGGAGATTTTGA CTGGATGCATGATTTCAACATCCAGGCCCAAGCTGATCCCTCGGGATTCAAGGCCAGGCTTGCCACGCGCTTTCAGATCG GTTCTGCTCAGATTGATGCCATTATTGGCAACGTTTCCAACCCAGTCGATGCTTATATGGTTATGCGCCTCGGGGAAATG TCAAATCATCAGCCGGAATATGTCATGAAGAAATATAAGGCGGGGAAGAAAAAAGGGTGGGGAGCCTTGGCGAAGAGCTT GGGTATTAAACCAGGATCGCCTGAGTTTCATGCACTGAAAAGAGGCGAGGATCTATATGGCTGTGGCGGAGGAAAGTATT CGGGAGAAAAAGGCCGCGGGAATGGTCGGGGAAAAAGTAAGAACAAGGGTTAA
Upstream 100 bases:
>100_bases ACAGCAAACACAGGCTAAGCCTCAATAGACTACTATAGATATTGTAACATGATAAGAAGATCGAGGTTAAAAATAGAAAA GAGAAGGAGGAAAAAGACTA
Downstream 100 bases:
>100_bases GAAGGATAGAAAAGCGTGACGCCGATCTCCGGTAGATGGCCGCATGTATGCCCCTATCGAATGACGGTCTGCTTGGGGGA AGGATGGCGGAGGTTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKLCRIMLVAAVLFFLSSSISVAGDFDWMHDFNIQAQADPSGFKARLATRFQIGSAQIDAIIGNVSNPVDAYMVMRLGEM SNHQPEYVMKKYKAGKKKGWGALAKSLGIKPGSPEFHALKRGEDLYGCGGGKYSGEKGRGNGRGKSKNKG
Sequences:
>Translated_150_residues MKLCRIMLVAAVLFFLSSSISVAGDFDWMHDFNIQAQADPSGFKARLATRFQIGSAQIDAIIGNVSNPVDAYMVMRLGEM SNHQPEYVMKKYKAGKKKGWGALAKSLGIKPGSPEFHALKRGEDLYGCGGGKYSGEKGRGNGRGKSKNKG >Mature_150_residues MKLCRIMLVAAVLFFLSSSISVAGDFDWMHDFNIQAQADPSGFKARLATRFQIGSAQIDAIIGNVSNPVDAYMVMRLGEM SNHQPEYVMKKYKAGKKKGWGALAKSLGIKPGSPEFHALKRGEDLYGCGGGKYSGEKGRGNGRGKSKNKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16249; Mature: 16249
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLCRIMLVAAVLFFLSSSISVAGDFDWMHDFNIQAQADPSGFKARLATRFQIGSAQIDA CHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEECCCCCCHHHHHHHHEECCCHHHHH IIGNVSNPVDAYMVMRLGEMSNHQPEYVMKKYKAGKKKGWGALAKSLGIKPGSPEFHALK HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH RGEDLYGCGGGKYSGEKGRGNGRGKSKNKG CCCCEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLCRIMLVAAVLFFLSSSISVAGDFDWMHDFNIQAQADPSGFKARLATRFQIGSAQIDA CHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEECCCCCCHHHHHHHHEECCCHHHHH IIGNVSNPVDAYMVMRLGEMSNHQPEYVMKKYKAGKKKGWGALAKSLGIKPGSPEFHALK HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH RGEDLYGCGGGKYSGEKGRGNGRGKSKNKG CCCCEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA