Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yfiQ [C]

Identifier: 85858899

GI number: 85858899

Start: 1080538

End: 1082631

Strand: Direct

Name: yfiQ [C]

Synonym: SYN_02112

Alternate gene names: 85858899

Gene position: 1080538-1082631 (Clockwise)

Preceding gene: 85858898

Following gene: 85858900

Centisome position: 33.99

GC content: 54.78

Gene sequence:

>2094_bases
ATGAAATATTTTTTGGAGCCGGAATCTGTAGCCATGATCGGAACACCCAGACAAACGGGCCCGGACACGTACAATGGAGT
AGAAATGATGCTCCGCTACGGCTACCAGGGACGCATCTATCCGATCAACCCGAAAGCCGATGAAATCTGTGGTCTCAGGG
CATTTCCCTCCATAACCGAAGTGCCGGAGACGGTAAACCTGGTGATTATCTCCATGGGTCGGGACCAGGTGGTTGCTGCT
TTTAAAGAGTGCATTCAATCCGGTGTGAAGCGGGTGATGATCGTCAGCCAGGGTTTTGCCGATGCCGATCCGCATGGGGA
GAAGCTCCAGAACGAGATCGTTCGGCTGGCTCGCGAGAGCGGCATACGGGTTGTCGGCCCCAACACACTGGGAATTCTGA
ACAATTTCCGTAATTTCTCGACCAGCTTTGTCGATCTCATCAAACCGAAGAAGATTCCGCCGGTGTCGTTGATCGCCCAG
ACGGGTATGATCCAGGTGGCCTCGCACAACCTCGCCTATCATGACTGGGGAAAGGCACTCGATATTGGGAATGCCTGTGA
TGTGGATTTTGTCGACGCGTTGGAATATTTCGGAGCCGATCCGGAAACCCGGGTTATCGTGGTGCACATGGAAGGCATCA
TCCGGGGAAGGGAATTCCTGAAAGCAGCCTCCCGGATATCCCCTGACAAACCGATCATCATTTTCAAAACCGGAAGGACT
ACGGCCGGTGCCAAGGCCGCCCTCTCCCATACGGCTTCTCTTACCGGGGAGGACGAAATCGCTGAGGCTGCCTTCAACCG
CGCCGGCCTCATTCGCGTGAAAAATGGTTCCGAACTGAAAGATGCCATCCGTTCTTTTATACAGTTTGAAGATATGGAGG
GGCCACGACTGGGAGTCCTGACCCCCACCGGAGCGGGAGGGATCATGGCAACGGATGCCTGTGAAGATTTCGGATTGAAG
ATTGCGGAATTGCCTGAGGGCCTTCCCGATAAGCTGAAAAAGGGGATACCGGACTGGGTTCACATCGGCAATCCTATCGA
CATCTGGCCTGTGGGCATGCTCGGGGGCGGTTACTCTCAGGCTTACAGAACCGCCCTGATGGAATTGCTGAAATCGCCGA
AGGTCGATGGTGTTTTGGGGGTGACGGTAAGCGTGGATTCCCCCCTTCACAAAAATATTGACATTGTCGAGGCGGTTGCA
GCCGCCCGGCGGGAAAGCGGCAGTCGGAAACCAATTGCCATGTGGGTCTATGGTTCGGGAACCGACGACACTGTGGAGCG
CCTTGAACCCGCCACCGACAATGTCGCCTGCTTCGAATCCGTCGAGCGGGCTGCGCAGGGCCTGTCGTTTTGTTACCGCT
ACCATCAGCTCAGAAAACGGGAAATCTCCTCCCAGCGGAGTTTCCCTTATGACCACGAGCAGGCCGAATCGCTGTTGCAG
AAGGGAAGAGGGCGTAAGATCCTGCTTGGAGAGGATGCCCTTGCCCTGCTGGCCGCTTTCGGGATTCACGTATCGCGGGG
AAAGATCGCACGAAACTGGAAAGAAATCAAAGAAGCGGCCGACGAACTGTCTTATCCACTTGTCCTGAAGTTGTCAGGCG
AAGCCTTTCTTCACAAAAGCGACTGGGGGGGGGTAATGACCGGGATTCGCAATAAAAAGGAGCTTCGTGAGGCCTTTCAG
GGGATGAAAGAAAAGGTAAATGATCGCAATCCAGCGGTGAAAATCGGTTTCCATGTGCAGGAACAGGTCGGGGGAAAGGA
ACTCCTCGTTGGTCTCAAACTTGACGCACAGTTCGGCCATATCCTTGCCTGCGGATACGGAGGCATATACACGGAGGTCT
TCAAGGACGTCAGCCGCGAACTCGTACCTGTTGGAAGGCCGGAGGCCGAAAAAATGATTTCGTCTCTGAAGATCTATCCT
TTGCTGAAGGGCGTGCGTGGTGAAGCCTGTGTGGATTGGGAAGGGCTTCTGGAAACCCTGGAAAGGGTTTCTTTCCTGGC
CACGGAGGTCCCGGACATCAAGGAACTGGACATCAATCCTCTGATGGCCGATGCCTCAGGCTGCGTGGCTGTCGATGCGC
GGATTGTCTGGTAA

Upstream 100 bases:

>100_bases
GCAACAAAAAAGTGAGTCAGTCAAGGGGCAGGGATCTCGGAGAATCTCAAAGAGGTTAAAAACGGATCTTGAACTTATGT
GAAAGGAGGAGGAATCTGAA

Downstream 100 bases:

>100_bases
TTCAAATCTCAGTCATGGATGAATTGAGAAGATGTTGCTTTTCGTAATGCGAGTATATGCGGAGGGGTTTTTGTGTCATG
AGGGTTGAAACACTGCAACA

Product: acetyl-CoA synthetase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MKYFLEPESVAMIGTPRQTGPDTYNGVEMMLRYGYQGRIYPINPKADEICGLRAFPSITEVPETVNLVIISMGRDQVVAA
FKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARESGIRVVGPNTLGILNNFRNFSTSFVDLIKPKKIPPVSLIAQ
TGMIQVASHNLAYHDWGKALDIGNACDVDFVDALEYFGADPETRVIVVHMEGIIRGREFLKAASRISPDKPIIIFKTGRT
TAGAKAALSHTASLTGEDEIAEAAFNRAGLIRVKNGSELKDAIRSFIQFEDMEGPRLGVLTPTGAGGIMATDACEDFGLK
IAELPEGLPDKLKKGIPDWVHIGNPIDIWPVGMLGGGYSQAYRTALMELLKSPKVDGVLGVTVSVDSPLHKNIDIVEAVA
AARRESGSRKPIAMWVYGSGTDDTVERLEPATDNVACFESVERAAQGLSFCYRYHQLRKREISSQRSFPYDHEQAESLLQ
KGRGRKILLGEDALALLAAFGIHVSRGKIARNWKEIKEAADELSYPLVLKLSGEAFLHKSDWGGVMTGIRNKKELREAFQ
GMKEKVNDRNPAVKIGFHVQEQVGGKELLVGLKLDAQFGHILACGYGGIYTEVFKDVSRELVPVGRPEAEKMISSLKIYP
LLKGVRGEACVDWEGLLETLERVSFLATEVPDIKELDINPLMADASGCVAVDARIVW

Sequences:

>Translated_697_residues
MKYFLEPESVAMIGTPRQTGPDTYNGVEMMLRYGYQGRIYPINPKADEICGLRAFPSITEVPETVNLVIISMGRDQVVAA
FKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARESGIRVVGPNTLGILNNFRNFSTSFVDLIKPKKIPPVSLIAQ
TGMIQVASHNLAYHDWGKALDIGNACDVDFVDALEYFGADPETRVIVVHMEGIIRGREFLKAASRISPDKPIIIFKTGRT
TAGAKAALSHTASLTGEDEIAEAAFNRAGLIRVKNGSELKDAIRSFIQFEDMEGPRLGVLTPTGAGGIMATDACEDFGLK
IAELPEGLPDKLKKGIPDWVHIGNPIDIWPVGMLGGGYSQAYRTALMELLKSPKVDGVLGVTVSVDSPLHKNIDIVEAVA
AARRESGSRKPIAMWVYGSGTDDTVERLEPATDNVACFESVERAAQGLSFCYRYHQLRKREISSQRSFPYDHEQAESLLQ
KGRGRKILLGEDALALLAAFGIHVSRGKIARNWKEIKEAADELSYPLVLKLSGEAFLHKSDWGGVMTGIRNKKELREAFQ
GMKEKVNDRNPAVKIGFHVQEQVGGKELLVGLKLDAQFGHILACGYGGIYTEVFKDVSRELVPVGRPEAEKMISSLKIYP
LLKGVRGEACVDWEGLLETLERVSFLATEVPDIKELDINPLMADASGCVAVDARIVW
>Mature_697_residues
MKYFLEPESVAMIGTPRQTGPDTYNGVEMMLRYGYQGRIYPINPKADEICGLRAFPSITEVPETVNLVIISMGRDQVVAA
FKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARESGIRVVGPNTLGILNNFRNFSTSFVDLIKPKKIPPVSLIAQ
TGMIQVASHNLAYHDWGKALDIGNACDVDFVDALEYFGADPETRVIVVHMEGIIRGREFLKAASRISPDKPIIIFKTGRT
TAGAKAALSHTASLTGEDEIAEAAFNRAGLIRVKNGSELKDAIRSFIQFEDMEGPRLGVLTPTGAGGIMATDACEDFGLK
IAELPEGLPDKLKKGIPDWVHIGNPIDIWPVGMLGGGYSQAYRTALMELLKSPKVDGVLGVTVSVDSPLHKNIDIVEAVA
AARRESGSRKPIAMWVYGSGTDDTVERLEPATDNVACFESVERAAQGLSFCYRYHQLRKREISSQRSFPYDHEQAESLLQ
KGRGRKILLGEDALALLAAFGIHVSRGKIARNWKEIKEAADELSYPLVLKLSGEAFLHKSDWGGVMTGIRNKKELREAFQ
GMKEKVNDRNPAVKIGFHVQEQVGGKELLVGLKLDAQFGHILACGYGGIYTEVFKDVSRELVPVGRPEAEKMISSLKIYP
LLKGVRGEACVDWEGLLETLERVSFLATEVPDIKELDINPLMADASGCVAVDARIVW

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=728, Percent_Identity=26.510989010989, Blast_Score=206, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 76405; Mature: 76405

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYFLEPESVAMIGTPRQTGPDTYNGVEMMLRYGYQGRIYPINPKADEICGLRAFPSITE
CCCEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCHHC
VPETVNLVIISMGRDQVVAAFKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARES
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHC
GIRVVGPNTLGILNNFRNFSTSFVDLIKPKKIPPVSLIAQTGMIQVASHNLAYHDWGKAL
CCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCEECCCCCCC
DIGNACDVDFVDALEYFGADPETRVIVVHMEGIIRGREFLKAASRISPDKPIIIFKTGRT
CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TAGAKAALSHTASLTGEDEIAEAAFNRAGLIRVKNGSELKDAIRSFIQFEDMEGPRLGVL
CCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
TPTGAGGIMATDACEDFGLKIAELPEGLPDKLKKGIPDWVHIGNPIDIWPVGMLGGGYSQ
CCCCCCCCEECCCHHHHCCCHHHCCCCCHHHHHHCCCCCEECCCCCCEEECCCCCCCHHH
AYRTALMELLKSPKVDGVLGVTVSVDSPLHKNIDIVEAVAAARRESGSRKPIAMWVYGSG
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC
TDDTVERLEPATDNVACFESVERAAQGLSFCYRYHQLRKREISSQRSFPYDHEQAESLLQ
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KGRGRKILLGEDALALLAAFGIHVSRGKIARNWKEIKEAADELSYPLVLKLSGEAFLHKS
CCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEC
DWGGVMTGIRNKKELREAFQGMKEKVNDRNPAVKIGFHVQEQVGGKELLVGLKLDAQFGH
CCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCEEEEEEEECCCCCC
ILACGYGGIYTEVFKDVSRELVPVGRPEAEKMISSLKIYPLLKGVRGEACVDWEGLLETL
EEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHH
ERVSFLATEVPDIKELDINPLMADASGCVAVDARIVW
HHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MKYFLEPESVAMIGTPRQTGPDTYNGVEMMLRYGYQGRIYPINPKADEICGLRAFPSITE
CCCEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCHHC
VPETVNLVIISMGRDQVVAAFKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARES
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHC
GIRVVGPNTLGILNNFRNFSTSFVDLIKPKKIPPVSLIAQTGMIQVASHNLAYHDWGKAL
CCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCEECCCCCCC
DIGNACDVDFVDALEYFGADPETRVIVVHMEGIIRGREFLKAASRISPDKPIIIFKTGRT
CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TAGAKAALSHTASLTGEDEIAEAAFNRAGLIRVKNGSELKDAIRSFIQFEDMEGPRLGVL
CCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
TPTGAGGIMATDACEDFGLKIAELPEGLPDKLKKGIPDWVHIGNPIDIWPVGMLGGGYSQ
CCCCCCCCEECCCHHHHCCCHHHCCCCCHHHHHHCCCCCEECCCCCCEEECCCCCCCHHH
AYRTALMELLKSPKVDGVLGVTVSVDSPLHKNIDIVEAVAAARRESGSRKPIAMWVYGSG
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC
TDDTVERLEPATDNVACFESVERAAQGLSFCYRYHQLRKREISSQRSFPYDHEQAESLLQ
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KGRGRKILLGEDALALLAAFGIHVSRGKIARNWKEIKEAADELSYPLVLKLSGEAFLHKS
CCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEC
DWGGVMTGIRNKKELREAFQGMKEKVNDRNPAVKIGFHVQEQVGGKELLVGLKLDAQFGH
CCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCEEEEEEEECCCCCC
ILACGYGGIYTEVFKDVSRELVPVGRPEAEKMISSLKIYPLLKGVRGEACVDWEGLLETL
EEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHH
ERVSFLATEVPDIKELDINPLMADASGCVAVDARIVW
HHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]