| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ilvE [H]
Identifier: 85858680
GI number: 85858680
Start: 857974
End: 858660
Strand: Direct
Name: ilvE [H]
Synonym: SYN_03154
Alternate gene names: 85858680
Gene position: 857974-858660 (Clockwise)
Preceding gene: 85858679
Following gene: 85858681
Centisome position: 26.99
GC content: 49.05
Gene sequence:
>687_bases ATGTTTAACCACGAAAGAGTTCGTAATCATGAAGGAGACGCACTTATGGAGATTAAAATGAATCCGCTGTCGCCGGAATC CAGAAAAACAAAGCCGGCAGATGAATCGAAATTGGGATTCGGCAAATTTTTCACGGATCATATGTTTACGATGACCTATC AAACCGATCGCGGATGGGAAAATGCGGAGATCGGCCCGTATCGGCCCATCTGTCTCGATCCGACGGCCATGTGTCTTCAT TACGGTCAGGAAATATTCGAAGGGATGAAGGCCTATCGCGGACGGTCAGGTGAAATCTATCTTTTCCGGCCCAAGGAAAA TATTCGACGCATGAATGCGTCTGCTGAGCGACTCTGCATGCCTGCCCTTGACCCGGATGTATTTATGGAAGCTCTGGTCA AGCTGGTTCTTCTGGAAAAAGACTGGATACCCCATGGGCGGGGTACATCCCTGTATATCAGACCAACCATGATTGCTACC GAGGCAGCGCTGGGCGTACATCCATCTGATGAATATCTCTTTTTCATTATCGTCGGCCCGGTAGGAGCCTATTATCCTGA AGGATTCCAATCCGACGAAAATTTTACGTCAGCGAGGAATATGTTCGATCAGTGCGTGGCGGGACAGGGACCTGCAAGAA CGCGGGGAATTATGCGGCAAGTCTTTATGCCAGTCAGATTGCCATGA
Upstream 100 bases:
>100_bases CGGCCACACCTATACACATGACGTGGGTAGTGGGGCACTTTTCCGGAATTCACTCTGTCAGGGGCAAGGACGATTCAGAA GGAAAGCTTCGGCATAAGAA
Downstream 100 bases:
>100_bases AAATGGGCTACACCCAGGGTTTTATGGCTGGATGCCATCGAGAGAAAGTACGTCGAAGAGGTGGGAACCAGCAATATCTT TTTCCTGATTGGCGATGAAC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 1 [H]
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MFNHERVRNHEGDALMEIKMNPLSPESRKTKPADESKLGFGKFFTDHMFTMTYQTDRGWENAEIGPYRPICLDPTAMCLH YGQEIFEGMKAYRGRSGEIYLFRPKENIRRMNASAERLCMPALDPDVFMEALVKLVLLEKDWIPHGRGTSLYIRPTMIAT EAALGVHPSDEYLFFIIVGPVGAYYPEGFQSDENFTSARNMFDQCVAGQGPARTRGIMRQVFMPVRLP
Sequences:
>Translated_228_residues MFNHERVRNHEGDALMEIKMNPLSPESRKTKPADESKLGFGKFFTDHMFTMTYQTDRGWENAEIGPYRPICLDPTAMCLH YGQEIFEGMKAYRGRSGEIYLFRPKENIRRMNASAERLCMPALDPDVFMEALVKLVLLEKDWIPHGRGTSLYIRPTMIAT EAALGVHPSDEYLFFIIVGPVGAYYPEGFQSDENFTSARNMFDQCVAGQGPARTRGIMRQVFMPVRLP >Mature_228_residues MFNHERVRNHEGDALMEIKMNPLSPESRKTKPADESKLGFGKFFTDHMFTMTYQTDRGWENAEIGPYRPICLDPTAMCLH YGQEIFEGMKAYRGRSGEIYLFRPKENIRRMNASAERLCMPALDPDVFMEALVKLVLLEKDWIPHGRGTSLYIRPTMIAT EAALGVHPSDEYLFFIIVGPVGAYYPEGFQSDENFTSARNMFDQCVAGQGPARTRGIMRQVFMPVRLP
Specific function: Transaminates branched-chain amino acids and ketoglutarate. Involved in the final step of the methionine regeneration pathway, where ketomethiobutyrate (KMTB) is converted to methionine via a transamination. The amino donor preference is isoleucine, leuci
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=186, Percent_Identity=39.7849462365591, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI296010904, Length=160, Percent_Identity=43.125, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI38176287, Length=160, Percent_Identity=43.125, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI296010906, Length=160, Percent_Identity=43.125, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI258614015, Length=133, Percent_Identity=39.8496240601504, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI296010902, Length=173, Percent_Identity=30.0578034682081, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI296010900, Length=160, Percent_Identity=32.5, Blast_Score=94, Evalue=7e-20, Organism=Escherichia coli, GI48994963, Length=136, Percent_Identity=30.8823529411765, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17568601, Length=183, Percent_Identity=40.4371584699454, Blast_Score=155, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17565728, Length=154, Percent_Identity=40.2597402597403, Blast_Score=117, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6322608, Length=169, Percent_Identity=46.1538461538462, Blast_Score=172, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6322002, Length=176, Percent_Identity=42.6136363636364, Blast_Score=155, Evalue=5e-39, Organism=Drosophila melanogaster, GI24641779, Length=188, Percent_Identity=40.4255319148936, Blast_Score=161, Evalue=3e-40,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 26099; Mature: 26099
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNHERVRNHEGDALMEIKMNPLSPESRKTKPADESKLGFGKFFTDHMFTMTYQTDRGWE CCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCC NAEIGPYRPICLDPTAMCLHYGQEIFEGMKAYRGRSGEIYLFRPKENIRRMNASAERLCM CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHCC PALDPDVFMEALVKLVLLEKDWIPHGRGTSLYIRPTMIATEAALGVHPSDEYLFFIIVGP CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHEEHHHHHCCCCCCCEEEEEEECC VGAYYPEGFQSDENFTSARNMFDQCVAGQGPARTRGIMRQVFMPVRLP CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFNHERVRNHEGDALMEIKMNPLSPESRKTKPADESKLGFGKFFTDHMFTMTYQTDRGWE CCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCC NAEIGPYRPICLDPTAMCLHYGQEIFEGMKAYRGRSGEIYLFRPKENIRRMNASAERLCM CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHCC PALDPDVFMEALVKLVLLEKDWIPHGRGTSLYIRPTMIATEAALGVHPSDEYLFFIIVGP CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHEEHHHHHCCCCCCCEEEEEEECC VGAYYPEGFQSDENFTSARNMFDQCVAGQGPARTRGIMRQVFMPVRLP CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]