| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ilvK [H]
Identifier: 85858681
GI number: 85858681
Start: 858721
End: 859098
Strand: Direct
Name: ilvK [H]
Synonym: SYN_03155
Alternate gene names: 85858681
Gene position: 858721-859098 (Clockwise)
Preceding gene: 85858680
Following gene: 85858682
Centisome position: 27.01
GC content: 50.26
Gene sequence:
>378_bases GTGGGAACCAGCAATATCTTTTTCCTGATTGGCGATGAACTGGTGACGGCCCCTCTGGAAGGGACCATCCTGCCCGGAGT GACTCGGGATTCCGTGATTAAAATGGCCCGGCACTGGGGGATGACCGTTTCGGAACGGAGACTTTCCATGGAGGAAGTTC TTCAGGCAGTCGAAACGGGAACGCTTAAGGAAGTTTTCGCGTCCGGCACGGCGGCTGTGGTTTCTCCTGTCGGTCAGTTT TATTATCAGGGTAAAGAGTATCAGGTTAATGGCGGAAAGACGGGGCCTTTAACGGAAAAACTTTACAATGAAATCCTTGG TATTCAGTATGGCGAAAAAGAGGATCCATTCGGCTGGAGAATGAAAATTTCCGACTGA
Upstream 100 bases:
>100_bases AATTATGCGGCAAGTCTTTATGCCAGTCAGATTGCCATGAAAATGGGCTACACCCAGGGTTTTATGGCTGGATGCCATCG AGAGAAAGTACGTCGAAGAG
Downstream 100 bases:
>100_bases GGATTCCCGATGAAATCTCATCCACAAGCCTGTGGACAAGCCTGTGGATAACGCTGTTGATAAATCGGGTAAGTCTGTAA TTGTTACGAATATTGACCGA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MGTSNIFFLIGDELVTAPLEGTILPGVTRDSVIKMARHWGMTVSERRLSMEEVLQAVETGTLKEVFASGTAAVVSPVGQF YYQGKEYQVNGGKTGPLTEKLYNEILGIQYGEKEDPFGWRMKISD
Sequences:
>Translated_125_residues MGTSNIFFLIGDELVTAPLEGTILPGVTRDSVIKMARHWGMTVSERRLSMEEVLQAVETGTLKEVFASGTAAVVSPVGQF YYQGKEYQVNGGKTGPLTEKLYNEILGIQYGEKEDPFGWRMKISD >Mature_124_residues GTSNIFFLIGDELVTAPLEGTILPGVTRDSVIKMARHWGMTVSERRLSMEEVLQAVETGTLKEVFASGTAAVVSPVGQFY YQGKEYQVNGGKTGPLTEKLYNEILGIQYGEKEDPFGWRMKISD
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010902, Length=131, Percent_Identity=38.9312977099237, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI38176287, Length=131, Percent_Identity=38.9312977099237, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI296010904, Length=121, Percent_Identity=40.495867768595, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI296010906, Length=131, Percent_Identity=38.9312977099237, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI296010900, Length=131, Percent_Identity=38.9312977099237, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI50658084, Length=118, Percent_Identity=42.3728813559322, Blast_Score=88, Evalue=2e-18, Organism=Homo sapiens, GI258614015, Length=118, Percent_Identity=42.3728813559322, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI48994963, Length=115, Percent_Identity=38.2608695652174, Blast_Score=75, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17568601, Length=126, Percent_Identity=48.4126984126984, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17565728, Length=95, Percent_Identity=38.9473684210526, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322608, Length=140, Percent_Identity=42.1428571428571, Blast_Score=96, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6322002, Length=127, Percent_Identity=41.7322834645669, Blast_Score=82, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641779, Length=125, Percent_Identity=42.4, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 13809; Mature: 13678
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSNIFFLIGDELVTAPLEGTILPGVTRDSVIKMARHWGMTVSERRLSMEEVLQAVETG CCCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCC TLKEVFASGTAAVVSPVGQFYYQGKEYQVNGGKTGPLTEKLYNEILGIQYGEKEDPFGWR HHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE MKISD EEECC >Mature Secondary Structure GTSNIFFLIGDELVTAPLEGTILPGVTRDSVIKMARHWGMTVSERRLSMEEVLQAVETG CCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCC TLKEVFASGTAAVVSPVGQFYYQGKEYQVNGGKTGPLTEKLYNEILGIQYGEKEDPFGWR HHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE MKISD EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]