| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is pyk [H]
Identifier: 85858605
GI number: 85858605
Start: 771519
End: 772946
Strand: Direct
Name: pyk [H]
Synonym: SYN_02952
Alternate gene names: 85858605
Gene position: 771519-772946 (Clockwise)
Preceding gene: 85858604
Following gene: 85858609
Centisome position: 24.27
GC content: 57.91
Gene sequence:
>1428_bases ATGAAGATTTCTTCACCGAAGACGAAGATCGTCTGCACCATCGGGCCGGCGTCTGAGAATCCCGACGTGATGAAACAGAT GATCGAAGCGGGAATGAACGTCGCCCGACTCAACTTCTCCCATGGCGACTTCGCGTCCCACGGGAAAGTCATCGGGAATC TGCGGGCTGTGTCGGCATTGCTCGGCCGGAGGATCGCAATCCTGGCCGATCTTTCCGGTCCGAAGATGCGTATCGGAACG TTTGCATCCGAACCGATCCAACTCGATACGGGTGACCTGTTCACGCTGACGACCGAGGACATCGTCGGTGACCGGAATCG AGTGTCCGTCTCATTCGATCGCCTTCCGAAGTCTGTAAGACCCGGGGACATGCTTTTTCTCAATGACGGATACATTCAGC TCAAGGTGAACGAGGCCAGGGGCAATGATGTCTTATGCAGCGTCATGGTCGGCGGCGAACTTCGTTCCCGCAAGGGACTC AATCTGCCGGGCATCGATCTCGGGATCAGCGCTTTTACCGAACGTGATCGTGAGTGCCTGCAGTTTGCCCTCGAGAACGG GGTGGACGCCGTGAGCCAGTCCTTCGTCGAAGGACCGGAGGATGTCGAGGCCGTGCGCAGGGCCGCCGCAGACATGGGAT ACACTCCCTTCGTTATCGCGAAGATCGAACGGTCCGGGGCGCTTGATCGCATTGAGGAGATCATCGCCGCAGCCGACGGC ATCATGATCGCCCGCGGCGACCTGGGTGTTGAAGTTCCGATCGAACAGATCGCCATGGTCCAGAAGCGGGTTATGCTCCT TGCAAACATGTGCGCGAAGCCCGTCATTACGGCAACACAGATGCTCGAGTCGATGACGGAAAATCGACGCCCTACCCGCG CCGAGGCAACCGATGTGGCCAACGCGATTCTTGACGGCACCGACTGCGTCATGCTTTCAGGCGAATCCGCCATGGGGAGG TATCCTGTGGAAGCTGTCGGGATGCTGGCGAAAATAGCCCTTTCGGCGGAAGCGCACCGCTCCATGATCGCGGTCAAAGA GATGTTCAAGGGAATCGATCTTCGAGGGAGGGTTCGTCTGGAACATCTCATTGCGATCGGCGTAGAGGCGTGCTTCGAAT TTGTGACACCGGCGGCCGTGTTTGTCCCGACGCGAAGCGGCGCCACGGCGCGGAGCATGGCCAGATTCCGCTTTCCCGTA TGGACTGTGGCCGTGAGTTCCGAAGAATCGACCTGCCAGGAACTCCTTTTCTCCTCAGGGGTTTATCCGGTGCGCGAGCT TCCCATGCCTGAGAACTGGAATGATTATGTCAAAAGGCAAGTCGCTGATCTTGGTCTGGAAGGAAAAATCGCAATTCTGA CCCGGGGTCCGTCGCGGGAGCATTCCGAGACGAATCACGGCGTGGAAATTCTCGACCTGACCATTTGA
Upstream 100 bases:
>100_bases CGATATGATGTAAAGGTGAAACCTGGATGAAAGTGGAATCCGTCGAGGAAGACGCGAAAGCGGGCTATGCCGGGCGGCTC AATGGACAGGGGGAAAAGGC
Downstream 100 bases:
>100_bases CAGTGGAAACGATGAGGCGCAGACGGGGCAAGTGAGGAGGAAAAAATGAAATTGTTGTAAGGCTGTCCGGGGATTTTCGG GAATGAACCGGTCAGGATGG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MKISSPKTKIVCTIGPASENPDVMKQMIEAGMNVARLNFSHGDFASHGKVIGNLRAVSALLGRRIAILADLSGPKMRIGT FASEPIQLDTGDLFTLTTEDIVGDRNRVSVSFDRLPKSVRPGDMLFLNDGYIQLKVNEARGNDVLCSVMVGGELRSRKGL NLPGIDLGISAFTERDRECLQFALENGVDAVSQSFVEGPEDVEAVRRAAADMGYTPFVIAKIERSGALDRIEEIIAAADG IMIARGDLGVEVPIEQIAMVQKRVMLLANMCAKPVITATQMLESMTENRRPTRAEATDVANAILDGTDCVMLSGESAMGR YPVEAVGMLAKIALSAEAHRSMIAVKEMFKGIDLRGRVRLEHLIAIGVEACFEFVTPAAVFVPTRSGATARSMARFRFPV WTVAVSSEESTCQELLFSSGVYPVRELPMPENWNDYVKRQVADLGLEGKIAILTRGPSREHSETNHGVEILDLTI
Sequences:
>Translated_475_residues MKISSPKTKIVCTIGPASENPDVMKQMIEAGMNVARLNFSHGDFASHGKVIGNLRAVSALLGRRIAILADLSGPKMRIGT FASEPIQLDTGDLFTLTTEDIVGDRNRVSVSFDRLPKSVRPGDMLFLNDGYIQLKVNEARGNDVLCSVMVGGELRSRKGL NLPGIDLGISAFTERDRECLQFALENGVDAVSQSFVEGPEDVEAVRRAAADMGYTPFVIAKIERSGALDRIEEIIAAADG IMIARGDLGVEVPIEQIAMVQKRVMLLANMCAKPVITATQMLESMTENRRPTRAEATDVANAILDGTDCVMLSGESAMGR YPVEAVGMLAKIALSAEAHRSMIAVKEMFKGIDLRGRVRLEHLIAIGVEACFEFVTPAAVFVPTRSGATARSMARFRFPV WTVAVSSEESTCQELLFSSGVYPVRELPMPENWNDYVKRQVADLGLEGKIAILTRGPSREHSETNHGVEILDLTI >Mature_475_residues MKISSPKTKIVCTIGPASENPDVMKQMIEAGMNVARLNFSHGDFASHGKVIGNLRAVSALLGRRIAILADLSGPKMRIGT FASEPIQLDTGDLFTLTTEDIVGDRNRVSVSFDRLPKSVRPGDMLFLNDGYIQLKVNEARGNDVLCSVMVGGELRSRKGL NLPGIDLGISAFTERDRECLQFALENGVDAVSQSFVEGPEDVEAVRRAAADMGYTPFVIAKIERSGALDRIEEIIAAADG IMIARGDLGVEVPIEQIAMVQKRVMLLANMCAKPVITATQMLESMTENRRPTRAEATDVANAILDGTDCVMLSGESAMGR YPVEAVGMLAKIALSAEAHRSMIAVKEMFKGIDLRGRVRLEHLIAIGVEACFEFVTPAAVFVPTRSGATARSMARFRFPV WTVAVSSEESTCQELLFSSGVYPVRELPMPENWNDYVKRQVADLGLEGKIAILTRGPSREHSETNHGVEILDLTI
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=457, Percent_Identity=38.9496717724289, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI33286420, Length=457, Percent_Identity=38.9496717724289, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI33286418, Length=452, Percent_Identity=38.4955752212389, Blast_Score=298, Evalue=9e-81, Organism=Homo sapiens, GI10835121, Length=467, Percent_Identity=40.0428265524625, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI32967597, Length=467, Percent_Identity=40.0428265524625, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=37.2413793103448, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=37.2413793103448, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI310128736, Length=240, Percent_Identity=34.5833333333333, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI310128734, Length=240, Percent_Identity=34.5833333333333, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI310128738, Length=209, Percent_Identity=33.9712918660287, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI1787965, Length=467, Percent_Identity=40.2569593147752, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI1788160, Length=432, Percent_Identity=39.5833333333333, Blast_Score=282, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17544584, Length=424, Percent_Identity=38.9150943396226, Blast_Score=313, Evalue=2e-85, Organism=Caenorhabditis elegans, GI71984413, Length=452, Percent_Identity=38.0530973451327, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17506829, Length=452, Percent_Identity=38.0530973451327, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI71984406, Length=452, Percent_Identity=38.0530973451327, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17506831, Length=430, Percent_Identity=39.3023255813954, Blast_Score=275, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6319279, Length=461, Percent_Identity=36.2255965292842, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6324923, Length=458, Percent_Identity=34.4978165938865, Blast_Score=259, Evalue=7e-70, Organism=Drosophila melanogaster, GI24648964, Length=440, Percent_Identity=38.1818181818182, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI28571814, Length=440, Percent_Identity=38.1818181818182, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24648966, Length=412, Percent_Identity=38.5922330097087, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI24581235, Length=438, Percent_Identity=33.1050228310502, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24646914, Length=309, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=5e-36,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51626; Mature: 51626
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISSPKTKIVCTIGPASENPDVMKQMIEAGMNVARLNFSHGDFASHGKVIGNLRAVSAL CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH LGRRIAILADLSGPKMRIGTFASEPIQLDTGDLFTLTTEDIVGDRNRVSVSFDRLPKSVR HCCEEEEEEECCCCCEEEECCCCCCEEECCCCEEEEEHHHHCCCCCEEEEEHHHCCCCCC PGDMLFLNDGYIQLKVNEARGNDVLCSVMVGGELRSRKGLNLPGIDLGISAFTERDRECL CCCEEEEECCEEEEEEECCCCCCEEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHH QFALENGVDAVSQSFVEGPEDVEAVRRAAADMGYTPFVIAKIERSGALDRIEEIIAAADG HHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC IMIARGDLGVEVPIEQIAMVQKRVMLLANMCAKPVITATQMLESMTENRRPTRAEATDVA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHH NAILDGTDCVMLSGESAMGRYPVEAVGMLAKIALSAEAHRSMIAVKEMFKGIDLRGRVRL HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH EHLIAIGVEACFEFVTPAAVFVPTRSGATARSMARFRFPVWTVAVSSEESTCQELLFSSG HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCC VYPVRELPMPENWNDYVKRQVADLGLEGKIAILTRGPSREHSETNHGVEILDLTI CCCHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKISSPKTKIVCTIGPASENPDVMKQMIEAGMNVARLNFSHGDFASHGKVIGNLRAVSAL CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH LGRRIAILADLSGPKMRIGTFASEPIQLDTGDLFTLTTEDIVGDRNRVSVSFDRLPKSVR HCCEEEEEEECCCCCEEEECCCCCCEEECCCCEEEEEHHHHCCCCCEEEEEHHHCCCCCC PGDMLFLNDGYIQLKVNEARGNDVLCSVMVGGELRSRKGLNLPGIDLGISAFTERDRECL CCCEEEEECCEEEEEEECCCCCCEEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHH QFALENGVDAVSQSFVEGPEDVEAVRRAAADMGYTPFVIAKIERSGALDRIEEIIAAADG HHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC IMIARGDLGVEVPIEQIAMVQKRVMLLANMCAKPVITATQMLESMTENRRPTRAEATDVA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHH NAILDGTDCVMLSGESAMGRYPVEAVGMLAKIALSAEAHRSMIAVKEMFKGIDLRGRVRL HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH EHLIAIGVEACFEFVTPAAVFVPTRSGATARSMARFRFPVWTVAVSSEESTCQELLFSSG HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCC VYPVRELPMPENWNDYVKRQVADLGLEGKIAILTRGPSREHSETNHGVEILDLTI CCCHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286; 9625784 [H]