Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858437

Identifier: 85858437

GI number: 85858437

Start: 590476

End: 591609

Strand: Direct

Name: 85858437

Synonym: SYN_02253

Alternate gene names: NA

Gene position: 590476-591609 (Clockwise)

Preceding gene: 85858436

Following gene: 85858438

Centisome position: 18.57

GC content: 47.88

Gene sequence:

>1134_bases
TTGAAAAATATCCTCCTTGCCGTTACAGGTCTCTCCCCTCAGGTCCTCACAGAAACACTTTACGCGCTGCACCAACAAGG
ACAGATTGTTCAGTCCATTCAAGTCATCACTACGCGGCAAGGAAAGGAGAAGATCAACGCCTACTTGTTGTCACCTACTG
ATGGCCAGTATTACAGTTATTTGAAGGATTATGGCATCAACCCGTCATCGATTTCCTTCTGTGCAGAAAACATTCATGTC
ATTAAAGACAGAAACGGAATCGAAATCGATGATATCGCGGGTGAGGATGACAATGAACGCCTCTTGGAGCTTTGTCTATC
CCTGACTTTCCAATTCACAAGCGATTCACAAAATACGGTTTTCTTTTCCATTGCAGGTGGACGCAAAACCATGAGTGCCT
GCTTGATGACTGCGGCACACCTTTATGGACGACCTCATGATAGGGTGTATCATGTCCTTGTGTCTCCGGAATTTGAGAGC
AATAGAGATTTCTTCTACCCACCCCGTGAGTCCGTTTCTATCGAACTGATGGACAGAAATGGTGAGCAATATGTCAAGGA
GACCCGATTCGCTCGGATCACTCTGACTTCGGTTCCCTTTATTTCCGTTCGCAACCGAATTGAAGATGATCTCCTAAAGG
AGCCTCAAGATCCGCCCACTTTGATGCTCTCCCTCATTCGAGAAGAACCACCTTCCCTGACCATCGATCTCATAACTTGT
AAACTGATATTTAAGGGGCGCGAGTTGGATATGCCCCCAACTCGTCTGGCTCTCTACGCGTTTTTTGCCAGCATCAAAAA
AGATTGCCTACGTACCGACACTAATTGTCGGCACTGTGCGGACTGTTACCTTAATAGCATAGCCATTGAACAACGTAACA
ATGAAATCGCAGAATTGTACAAAAGGATTGCCTTTTCCCGTGATTTCCACGCCATGCGGGAAGCAAGTGATGGCGGCATT
CTGAATCTCGATGAAGCCAACTTCAAGTCCTATCGAAGCCGCATCCGGAGGGATCTGGAAAGGGGCTTCGGGCTCTCCGC
CAGCCGGATGCTGGAGATCGCCTCGACGGGAAAGCGTCCGGACACCCGCTACGGAATTCCTTTTGAACGGGAAAGAATTC
GCATGATCTTCTGA

Upstream 100 bases:

>100_bases
TCTCCGAATTTCTCCCCCTTCTCCGTTTCTGCGAAAAGACGCATCTGGGCAAGCAGACATCCTTCGGACTGGGTAAAATC
GACATTAAAGAGGTTGCACC

Downstream 100 bases:

>100_bases
GCGGTTATTAGTGAAAGCGGCACATCAGCAACGTTGCCGTTTTTGAACGTAAGTCATTTTCGTATGAAATAAAGTGAAAT
ACGTAAAGTTACAAAAGTAA

Product: cytoplasmic protein

Products: NA

Alternate protein names: Cytoplasmic Protein

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKNILLAVTGLSPQVLTETLYALHQQGQIVQSIQVITTRQGKEKINAYLLSPTDGQYYSYLKDYGINPSSISFCAENIHV
IKDRNGIEIDDIAGEDDNERLLELCLSLTFQFTSDSQNTVFFSIAGGRKTMSACLMTAAHLYGRPHDRVYHVLVSPEFES
NRDFFYPPRESVSIELMDRNGEQYVKETRFARITLTSVPFISVRNRIEDDLLKEPQDPPTLMLSLIREEPPSLTIDLITC
KLIFKGRELDMPPTRLALYAFFASIKKDCLRTDTNCRHCADCYLNSIAIEQRNNEIAELYKRIAFSRDFHAMREASDGGI
LNLDEANFKSYRSRIRRDLERGFGLSASRMLEIASTGKRPDTRYGIPFERERIRMIF

Sequences:

>Translated_377_residues
MKNILLAVTGLSPQVLTETLYALHQQGQIVQSIQVITTRQGKEKINAYLLSPTDGQYYSYLKDYGINPSSISFCAENIHV
IKDRNGIEIDDIAGEDDNERLLELCLSLTFQFTSDSQNTVFFSIAGGRKTMSACLMTAAHLYGRPHDRVYHVLVSPEFES
NRDFFYPPRESVSIELMDRNGEQYVKETRFARITLTSVPFISVRNRIEDDLLKEPQDPPTLMLSLIREEPPSLTIDLITC
KLIFKGRELDMPPTRLALYAFFASIKKDCLRTDTNCRHCADCYLNSIAIEQRNNEIAELYKRIAFSRDFHAMREASDGGI
LNLDEANFKSYRSRIRRDLERGFGLSASRMLEIASTGKRPDTRYGIPFERERIRMIF
>Mature_377_residues
MKNILLAVTGLSPQVLTETLYALHQQGQIVQSIQVITTRQGKEKINAYLLSPTDGQYYSYLKDYGINPSSISFCAENIHV
IKDRNGIEIDDIAGEDDNERLLELCLSLTFQFTSDSQNTVFFSIAGGRKTMSACLMTAAHLYGRPHDRVYHVLVSPEFES
NRDFFYPPRESVSIELMDRNGEQYVKETRFARITLTSVPFISVRNRIEDDLLKEPQDPPTLMLSLIREEPPSLTIDLITC
KLIFKGRELDMPPTRLALYAFFASIKKDCLRTDTNCRHCADCYLNSIAIEQRNNEIAELYKRIAFSRDFHAMREASDGGI
LNLDEANFKSYRSRIRRDLERGFGLSASRMLEIASTGKRPDTRYGIPFERERIRMIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43246; Mature: 43246

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILLAVTGLSPQVLTETLYALHQQGQIVQSIQVITTRQGKEKINAYLLSPTDGQYYSY
CCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCEEEEEECCCCCHHHHH
LKDYGINPSSISFCAENIHVIKDRNGIEIDDIAGEDDNERLLELCLSLTFQFTSDSQNTV
HHHCCCCCHHHHHHHCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHEEEECCCCCCEE
FFSIAGGRKTMSACLMTAAHLYGRPHDRVYHVLVSPEFESNRDFFYPPRESVSIELMDRN
EEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC
GEQYVKETRFARITLTSVPFISVRNRIEDDLLKEPQDPPTLMLSLIREEPPSLTIDLITC
CHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEE
KLIFKGRELDMPPTRLALYAFFASIKKDCLRTDTNCRHCADCYLNSIAIEQRNNEIAELY
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCHHHHHH
KRIAFSRDFHAMREASDGGILNLDEANFKSYRSRIRRDLERGFGLSASRMLEIASTGKRP
HHHHHCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
DTRYGIPFERERIRMIF
CCCCCCCCCCCHHEECC
>Mature Secondary Structure
MKNILLAVTGLSPQVLTETLYALHQQGQIVQSIQVITTRQGKEKINAYLLSPTDGQYYSY
CCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCEEEEEECCCCCHHHHH
LKDYGINPSSISFCAENIHVIKDRNGIEIDDIAGEDDNERLLELCLSLTFQFTSDSQNTV
HHHCCCCCHHHHHHHCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHEEEECCCCCCEE
FFSIAGGRKTMSACLMTAAHLYGRPHDRVYHVLVSPEFESNRDFFYPPRESVSIELMDRN
EEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC
GEQYVKETRFARITLTSVPFISVRNRIEDDLLKEPQDPPTLMLSLIREEPPSLTIDLITC
CHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEE
KLIFKGRELDMPPTRLALYAFFASIKKDCLRTDTNCRHCADCYLNSIAIEQRNNEIAELY
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCHHHHHH
KRIAFSRDFHAMREASDGGILNLDEANFKSYRSRIRRDLERGFGLSASRMLEIASTGKRP
HHHHHCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
DTRYGIPFERERIRMIF
CCCCCCCCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA