Click here to switch to the map view.

The map label for this gene is 85858436

Identifier: 85858436

GI number: 85858436

Start: 589475

End: 590479

Strand: Direct

Name: 85858436

Synonym: SYN_02254

Alternate gene names: NA

Gene position: 589475-590479 (Clockwise)

Preceding gene: 85858435

Following gene: 85858437

Centisome position: 18.54

GC content: 47.36

Gene sequence:

>1005_bases
GTGCATAAATTCACGGTCATGGAACAGCCTATTCATATTCCGGTGAGCAGATGCATGTTGTACGGCAGATATTCATTTTT
TAATAATTTTCTGGATGATGCGGTCCTTCCTTGTTATAAGGGATCAACCTTCCGTGGAGTTTTCGGTCATGCCCTTAAGA
AGGTAACTTGCGCACTGAAGCGACAGGAATGTACAGGCTGCCTTCTGCAGGAAAAGTGTGTTTATGCCTTCATTTTCGAG
ATTCAGCCTGACGCAGATACCGTAAAACGCCGCCGCATCGCTGCCCCACCTCATCCTTATGTCATTGAACCACCCATTGA
AACCCGCAACCGATACTTACAAGGAAAATCTTTCAATTTTGACTTAATTCTCTTCGGCCCCGCAAATGATTACCTGCCTT
ATTTTGTTTATGCCATTGAACAGATGGGGCAGTTAGGGATCGGTCAGAGAATGGGGGGGCAACGCGCCCGTTTTCTTCTT
CAATCTGTTCGTGTTGCAAACTCCACCGTATATGACAGTCATAATGGCAAACTTAACAGCGGCTGTTTTACGGAAGATCT
CGCACTTTTCGATGTTTTAATCTCCGATAACCCTGATCACTGCACAGAGCTTGAACTGACCCTGTTGACTCCCCTCCGTC
TCAAATATGAAAATAAGTTTGAAGCCACGCTCCCTTTTCATGTCCTCATCCGCGCAGCTCTCCGTCGAACTTCATCTCTT
TGCCATTACTATGGGGCAGGCGAACCATCGCTGAATTACCGAGGACTTGTACGGCGAGCCCAAACAATTACTGTCAAAGA
ATCTAACCTCCACTGGTTTGATTGGAAACGATACTCAAACCGGCAGGATCAGGCCATGCTCATGGGAGGATTGACCGGAA
GCATCCGCTACGCAGGTTCCCTCTCCGAATTTCTCCCCCTTCTCCGTTTCTGCGAAAAGACGCATCTGGGCAAGCAGACA
TCCTTCGGACTGGGTAAAATCGACATTAAAGAGGTTGCACCTTGA

Upstream 100 bases:

>100_bases
GAAATTTCCGGCAAATGGCTCCGAGAAGAAAAACAAGGTCAGCTCTTTCAACTTTATAGTTCATCAGCAACGTTGCCCTG
CTGTTCTTTTTCCAACTCGT

Downstream 100 bases:

>100_bases
AAAATATCCTCCTTGCCGTTACAGGTCTCTCCCCTCAGGTCCTCACAGAAACACTTTACGCGCTGCACCAACAAGGACAG
ATTGTTCAGTCCATTCAAGT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MHKFTVMEQPIHIPVSRCMLYGRYSFFNNFLDDAVLPCYKGSTFRGVFGHALKKVTCALKRQECTGCLLQEKCVYAFIFE
IQPDADTVKRRRIAAPPHPYVIEPPIETRNRYLQGKSFNFDLILFGPANDYLPYFVYAIEQMGQLGIGQRMGGQRARFLL
QSVRVANSTVYDSHNGKLNSGCFTEDLALFDVLISDNPDHCTELELTLLTPLRLKYENKFEATLPFHVLIRAALRRTSSL
CHYYGAGEPSLNYRGLVRRAQTITVKESNLHWFDWKRYSNRQDQAMLMGGLTGSIRYAGSLSEFLPLLRFCEKTHLGKQT
SFGLGKIDIKEVAP

Sequences:

>Translated_334_residues
MHKFTVMEQPIHIPVSRCMLYGRYSFFNNFLDDAVLPCYKGSTFRGVFGHALKKVTCALKRQECTGCLLQEKCVYAFIFE
IQPDADTVKRRRIAAPPHPYVIEPPIETRNRYLQGKSFNFDLILFGPANDYLPYFVYAIEQMGQLGIGQRMGGQRARFLL
QSVRVANSTVYDSHNGKLNSGCFTEDLALFDVLISDNPDHCTELELTLLTPLRLKYENKFEATLPFHVLIRAALRRTSSL
CHYYGAGEPSLNYRGLVRRAQTITVKESNLHWFDWKRYSNRQDQAMLMGGLTGSIRYAGSLSEFLPLLRFCEKTHLGKQT
SFGLGKIDIKEVAP
>Mature_334_residues
MHKFTVMEQPIHIPVSRCMLYGRYSFFNNFLDDAVLPCYKGSTFRGVFGHALKKVTCALKRQECTGCLLQEKCVYAFIFE
IQPDADTVKRRRIAAPPHPYVIEPPIETRNRYLQGKSFNFDLILFGPANDYLPYFVYAIEQMGQLGIGQRMGGQRARFLL
QSVRVANSTVYDSHNGKLNSGCFTEDLALFDVLISDNPDHCTELELTLLTPLRLKYENKFEATLPFHVLIRAALRRTSSL
CHYYGAGEPSLNYRGLVRRAQTITVKESNLHWFDWKRYSNRQDQAMLMGGLTGSIRYAGSLSEFLPLLRFCEKTHLGKQT
SFGLGKIDIKEVAP

Specific function: Unknown

COG id: COG5551

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019267
- InterPro:   IPR010156 [H]

Pfam domain/function: PF10040 DUF2276 [H]

EC number: NA

Molecular weight: Translated: 38163; Mature: 38163

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKFTVMEQPIHIPVSRCMLYGRYSFFNNFLDDAVLPCYKGSTFRGVFGHALKKVTCALK
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
RQECTGCLLQEKCVYAFIFEIQPDADTVKRRRIAAPPHPYVIEPPIETRNRYLQGKSFNF
HHHHHHHHHHHCEEEEEEEEECCCHHHHHHHCCCCCCCCEEECCCHHHHHHEECCCCCCE
DLILFGPANDYLPYFVYAIEQMGQLGIGQRMGGQRARFLLQSVRVANSTVYDSHNGKLNS
EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCC
GCFTEDLALFDVLISDNPDHCTELELTLLTPLRLKYENKFEATLPFHVLIRAALRRTSSL
CCCHHHHHHEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
CHYYGAGEPSLNYRGLVRRAQTITVKESNLHWFDWKRYSNRQDQAMLMGGLTGSIRYAGS
HHHCCCCCCCCCHHHHHHHHEEEEEEECCCEEEECHHHCCCCCCEEEECCCCCCEEECCC
LSEFLPLLRFCEKTHLGKQTSFGLGKIDIKEVAP
HHHHHHHHHHHHHHCCCCCCCCCCCCEEHHCCCC
>Mature Secondary Structure
MHKFTVMEQPIHIPVSRCMLYGRYSFFNNFLDDAVLPCYKGSTFRGVFGHALKKVTCALK
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
RQECTGCLLQEKCVYAFIFEIQPDADTVKRRRIAAPPHPYVIEPPIETRNRYLQGKSFNF
HHHHHHHHHHHCEEEEEEEEECCCHHHHHHHCCCCCCCCEEECCCHHHHHHEECCCCCCE
DLILFGPANDYLPYFVYAIEQMGQLGIGQRMGGQRARFLLQSVRVANSTVYDSHNGKLNS
EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCC
GCFTEDLALFDVLISDNPDHCTELELTLLTPLRLKYENKFEATLPFHVLIRAALRRTSSL
CCCHHHHHHEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
CHYYGAGEPSLNYRGLVRRAQTITVKESNLHWFDWKRYSNRQDQAMLMGGLTGSIRYAGS
HHHCCCCCCCCCHHHHHHHHEEEEEEECCCEEEECHHHCCCCCCEEEECCCCCCEEECCC
LSEFLPLLRFCEKTHLGKQTSFGLGKIDIKEVAP
HHHHHHHHHHHHHHCCCCCCCCCCCCEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]