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The map label for this gene is 85858438

Identifier: 85858438

GI number: 85858438

Start: 591829

End: 592698

Strand: Direct

Name: 85858438

Synonym: SYN_02252

Alternate gene names: NA

Gene position: 591829-592698 (Clockwise)

Preceding gene: 85858437

Following gene: 85858439

Centisome position: 18.62

GC content: 36.32

Gene sequence:

>870_bases
ATGTTTAATATCTCTCGATTCAAGGATATTGAAAGCTATGATTACAAATTCGAGGTAGTAACACCGCTTTTTCTTGGAGG
TGCTGATCCACAAAATGCAGAAATACGATCTGCACCGATTAAGGGTGCTCTCAGATTCTGGTGGAGGGCACTTTATGGCA
GTGATGATATAGAAGAAATGAAAACAAAAGAAAATGAAATTTGGGGCTCCACTCAATCTAAATCACAGGTTACGATCAAA
GTAATATTTCAGGACATTCAGACATCAAGAGAAAAATTGGATAAGGGAAATTTTAATATTTACGAATATCTTGGCTACGG
TTATCGCGTCAGCAATAACGTGCGAAGCTATTTTAAAAGTGGATCTTTCACAATTCGGCTTACATACAATAAAAATCACC
ACGATCAGATAGCAAATACTATTTCGTTTTTGATTTATTTCGGCGGTATTGGTGCAAAGGCGAGAAATGGATTCGGTTCC
TTATACTGCTCAGATGTTCAGAAACCCTTATTTGTACAATTCAAAAAAGGACGTATCAAATCATTTACCGCACTCTCTGA
GCAATCATTACTATTCGATAATTTCACTCCAAAAGAATCATGGAAAGATGCTCTTGCCGAAATTGGCAATCTTTATAAGC
AAGCAAGGTTCGAACTTAAAAATCAAGGAGAAAAAAGAGAGTTACTGGCAAAACCATTCAAGCGAGACAACTCAAGGCAT
GCAAAACCATATTTCCTTCACGTTACAAAACTGCCTAGCGGCCAATATAAAGCTCACATTCTTTATCTGCCCTATGAGTA
CTACGATGAAAAGAAACGACAAGATTACTTTAGGTTATGTAATAAAGTGAACGAGATACTAAAAAAATAA

Upstream 100 bases:

>100_bases
GACACCGTCCTGAAAATCGCACTGGCAAGTTTTCATAACAAAATAAATAAGAATAGAGTTCAGACTCAAAATGTTGACAG
CAAAATAACGGGAGGTCGAA

Downstream 100 bases:

>100_bases
TTTAGTGGAGACATAAAATGACATGGCAGATACCTGATACATCCTACTGGGAAAACAAGTTTGCCGCCTACTGGCATGAC
CCTATCGATAAAGTCATCAG

Product: cytoplasmic protein

Products: NA

Alternate protein names: Cmr1 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Cmr1 Family Protein; CRISPR-Associated RAMP Protein; Cytoplasmic Protein

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MFNISRFKDIESYDYKFEVVTPLFLGGADPQNAEIRSAPIKGALRFWWRALYGSDDIEEMKTKENEIWGSTQSKSQVTIK
VIFQDIQTSREKLDKGNFNIYEYLGYGYRVSNNVRSYFKSGSFTIRLTYNKNHHDQIANTISFLIYFGGIGAKARNGFGS
LYCSDVQKPLFVQFKKGRIKSFTALSEQSLLFDNFTPKESWKDALAEIGNLYKQARFELKNQGEKRELLAKPFKRDNSRH
AKPYFLHVTKLPSGQYKAHILYLPYEYYDEKKRQDYFRLCNKVNEILKK

Sequences:

>Translated_289_residues
MFNISRFKDIESYDYKFEVVTPLFLGGADPQNAEIRSAPIKGALRFWWRALYGSDDIEEMKTKENEIWGSTQSKSQVTIK
VIFQDIQTSREKLDKGNFNIYEYLGYGYRVSNNVRSYFKSGSFTIRLTYNKNHHDQIANTISFLIYFGGIGAKARNGFGS
LYCSDVQKPLFVQFKKGRIKSFTALSEQSLLFDNFTPKESWKDALAEIGNLYKQARFELKNQGEKRELLAKPFKRDNSRH
AKPYFLHVTKLPSGQYKAHILYLPYEYYDEKKRQDYFRLCNKVNEILKK
>Mature_289_residues
MFNISRFKDIESYDYKFEVVTPLFLGGADPQNAEIRSAPIKGALRFWWRALYGSDDIEEMKTKENEIWGSTQSKSQVTIK
VIFQDIQTSREKLDKGNFNIYEYLGYGYRVSNNVRSYFKSGSFTIRLTYNKNHHDQIANTISFLIYFGGIGAKARNGFGS
LYCSDVQKPLFVQFKKGRIKSFTALSEQSLLFDNFTPKESWKDALAEIGNLYKQARFELKNQGEKRELLAKPFKRDNSRH
AKPYFLHVTKLPSGQYKAHILYLPYEYYDEKKRQDYFRLCNKVNEILKK

Specific function: Unknown

COG id: COG1367

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33887; Mature: 33887

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNISRFKDIESYDYKFEVVTPLFLGGADPQNAEIRSAPIKGALRFWWRALYGSDDIEEM
CCCCHHHCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
KTKENEIWGSTQSKSQVTIKVIFQDIQTSREKLDKGNFNIYEYLGYGYRVSNNVRSYFKS
HHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECHHHHHHHCC
GSFTIRLTYNKNHHDQIANTISFLIYFGGIGAKARNGFGSLYCSDVQKPLFVQFKKGRIK
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCCCCEEEEECCCCCH
SFTALSEQSLLFDNFTPKESWKDALAEIGNLYKQARFELKNQGEKRELLAKPFKRDNSRH
HHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
AKPYFLHVTKLPSGQYKAHILYLPYEYYDEKKRQDYFRLCNKVNEILKK
CCEEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNISRFKDIESYDYKFEVVTPLFLGGADPQNAEIRSAPIKGALRFWWRALYGSDDIEEM
CCCCHHHCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
KTKENEIWGSTQSKSQVTIKVIFQDIQTSREKLDKGNFNIYEYLGYGYRVSNNVRSYFKS
HHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECHHHHHHHCC
GSFTIRLTYNKNHHDQIANTISFLIYFGGIGAKARNGFGSLYCSDVQKPLFVQFKKGRIK
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCCCCEEEEECCCCCH
SFTALSEQSLLFDNFTPKESWKDALAEIGNLYKQARFELKNQGEKRELLAKPFKRDNSRH
HHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
AKPYFLHVTKLPSGQYKAHILYLPYEYYDEKKRQDYFRLCNKVNEILKK
CCEEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA