| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is mlaA [H]
Identifier: 85858107
GI number: 85858107
Start: 278217
End: 279266
Strand: Direct
Name: mlaA [H]
Synonym: SYN_01266
Alternate gene names: 85858107
Gene position: 278217-279266 (Clockwise)
Preceding gene: 85858106
Following gene: 85858108
Centisome position: 8.75
GC content: 54.57
Gene sequence:
>1050_bases ATGAAAAAGCTCCGCTTATCCGTTTTTTTTCTTCTTGTCCTTAGCATTGTTGCGGGTTCCGCCGATCGATCGGATGCTTC GATTTTCCCGGCGGGAACTGTGGCGCCCTTACAGCAGGGGATTGCAGGAGAATCCATTCATGAAGCCCCTGTTGTTCGGG GATTGCCGGAAATGTCTGCAACGCCCGGGCCGATGCATGTCCAAGGCATGCAGATTTGCGCTGCCGCAGCCGTAAGGACT GAAGAGAAGGCAGAAGGAGACGAAGAAGCCGGGAACGTTTCCGACCCGATGGAATCCCTTAATGCGCCGGAGGCGGAAGG TGCAGAGGAAACAGATGTTTCCGATGACCTGGAATCGGACTATCTGCCGGAAGAAGGTGAGGAGCAGCCGACAGTAACGA TCTCCGATCCCCTGGAGCCCTTCAACCGGGCCATGTATCATTTCAACGACAAGCTTTATTTCTGGCTGCTCAAGCCCGTG GGCCAGGCCTATGGCAAGGTTGTACCCGAGCCGGCGCGGATCAGTGTCCGGAATTTCTTTTCCAATCTGGCCTTTCCGTT CCGATTTCTAAGCTGCCTGCTGCAGGCGGATTTCCGCGGCGTTGCCACGGAAACAGGCCGTTTCACCGTCAACACAATCT GGGGTATCGGAGGTTTTCTGGATGCGTCATCGAGCAGGGAGTTGAATATCCCGAAACAGGATGTGGATCTGGGGCAGACC CTCGGTGTTTACGGTGTGGGGCATGGGTTTTATTTCGTCTGGCCGGTATTCGGTCCTTCCAGTCTGCGGGATTCCGCAGA CATCGTGGGTGGATTTTTCCTCGATCCCGTTAATTATCTGAATCCCTGGTACACGCCGGCGGCCGTTCATGGATATGAAG CGGTAAACGAGACCTCCCTGACTATAGGGGATTATGAGGCGCTCAAGGGAGCGGCCATCGATCCTTATGTCTCCATCCGG GATGCCTTTGTCCAGTACCGGAAGAAGAAGATTGACGCCCGGAAGGTCAAGATGGAACATTCTGGATCGGTGGAAACGCA GAAAAAATGA
Upstream 100 bases:
>100_bases TCCTGAACGGTCAGAAGCCCGAACAACTGCTTCAGACCCTCAGGAAAAAGGTGAAGGAACAGCAGTAAAATCCAGGCAAA ACGAAAGAGGGGTTCTGTCC
Downstream 100 bases:
>100_bases CCGGACGGTAAGGGTCGAGCAAGGGCATCCTTGCTGCAAAGCCTCAAGGAGACTGTGTCGCAGGCAGAACAAAAGGAAAT CGGGGGGACGGAATGATTGA
Product: surface lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKKLRLSVFFLLVLSIVAGSADRSDASIFPAGTVAPLQQGIAGESIHEAPVVRGLPEMSATPGPMHVQGMQICAAAAVRT EEKAEGDEEAGNVSDPMESLNAPEAEGAEETDVSDDLESDYLPEEGEEQPTVTISDPLEPFNRAMYHFNDKLYFWLLKPV GQAYGKVVPEPARISVRNFFSNLAFPFRFLSCLLQADFRGVATETGRFTVNTIWGIGGFLDASSSRELNIPKQDVDLGQT LGVYGVGHGFYFVWPVFGPSSLRDSADIVGGFFLDPVNYLNPWYTPAAVHGYEAVNETSLTIGDYEALKGAAIDPYVSIR DAFVQYRKKKIDARKVKMEHSGSVETQKK
Sequences:
>Translated_349_residues MKKLRLSVFFLLVLSIVAGSADRSDASIFPAGTVAPLQQGIAGESIHEAPVVRGLPEMSATPGPMHVQGMQICAAAAVRT EEKAEGDEEAGNVSDPMESLNAPEAEGAEETDVSDDLESDYLPEEGEEQPTVTISDPLEPFNRAMYHFNDKLYFWLLKPV GQAYGKVVPEPARISVRNFFSNLAFPFRFLSCLLQADFRGVATETGRFTVNTIWGIGGFLDASSSRELNIPKQDVDLGQT LGVYGVGHGFYFVWPVFGPSSLRDSADIVGGFFLDPVNYLNPWYTPAAVHGYEAVNETSLTIGDYEALKGAAIDPYVSIR DAFVQYRKKKIDARKVKMEHSGSVETQKK >Mature_349_residues MKKLRLSVFFLLVLSIVAGSADRSDASIFPAGTVAPLQQGIAGESIHEAPVVRGLPEMSATPGPMHVQGMQICAAAAVRT EEKAEGDEEAGNVSDPMESLNAPEAEGAEETDVSDDLESDYLPEEGEEQPTVTISDPLEPFNRAMYHFNDKLYFWLLKPV GQAYGKVVPEPARISVRNFFSNLAFPFRFLSCLLQADFRGVATETGRFTVNTIWGIGGFLDASSSRELNIPKQDVDLGQT LGVYGVGHGFYFVWPVFGPSSLRDSADIVGGFFLDPVNYLNPWYTPAAVHGYEAVNETSLTIGDYEALKGAAIDPYVSIR DAFVQYRKKKIDARKVKMEHSGSVETQKK
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=195, Percent_Identity=37.4358974358974, Blast_Score=108, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 38156; Mature: 38156
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLRLSVFFLLVLSIVAGSADRSDASIFPAGTVAPLQQGIAGESIHEAPVVRGLPEMSA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCC TPGPMHVQGMQICAAAAVRTEEKAEGDEEAGNVSDPMESLNAPEAEGAEETDVSDDLESD CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHC YLPEEGEEQPTVTISDPLEPFNRAMYHFNDKLYFWLLKPVGQAYGKVVPEPARISVRNFF CCCCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHH SNLAFPFRFLSCLLQADFRGVATETGRFTVNTIWGIGGFLDASSSRELNIPKQDVDLGQT HHHCHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHH LGVYGVGHGFYFVWPVFGPSSLRDSADIVGGFFLDPVNYLNPWYTPAAVHGYEAVNETSL CCCEEECCCEEEEEECCCCHHCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCEE TIGDYEALKGAAIDPYVSIRDAFVQYRKKKIDARKVKMEHSGSVETQKK EECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCC >Mature Secondary Structure MKKLRLSVFFLLVLSIVAGSADRSDASIFPAGTVAPLQQGIAGESIHEAPVVRGLPEMSA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCC TPGPMHVQGMQICAAAAVRTEEKAEGDEEAGNVSDPMESLNAPEAEGAEETDVSDDLESD CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHC YLPEEGEEQPTVTISDPLEPFNRAMYHFNDKLYFWLLKPVGQAYGKVVPEPARISVRNFF CCCCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHH SNLAFPFRFLSCLLQADFRGVATETGRFTVNTIWGIGGFLDASSSRELNIPKQDVDLGQT HHHCHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHH LGVYGVGHGFYFVWPVFGPSSLRDSADIVGGFFLDPVNYLNPWYTPAAVHGYEAVNETSL CCCEEECCCEEEEEECCCCHHCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCEE TIGDYEALKGAAIDPYVSIRDAFVQYRKKKIDARKVKMEHSGSVETQKK EECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]