| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858106
Identifier: 85858106
GI number: 85858106
Start: 277588
End: 278184
Strand: Direct
Name: 85858106
Synonym: SYN_01265
Alternate gene names: NA
Gene position: 277588-278184 (Clockwise)
Preceding gene: 85858105
Following gene: 85858107
Centisome position: 8.73
GC content: 50.75
Gene sequence:
>597_bases ATGAAGAGACTGTTCATGAACGTTATTTTCCTGTTGCTTCTGCTGTTGCCTTCATCTGTATTTGCCGGTGTGCCTCTGGA TACGGTTCAGGTCAATGTGAACAAGGTGCTTGAGGTTCTGCGCGATCCGGCACTCAAGCCGGCGTCAGCCAAAACGGTAA AAAAAGAGAAACTCCGGGTGATCTACGAGCGCATGTTCGATGAGGTCGAACTGTCCCGGCGCGCCCTGGCGAGACACTGG AACAGCCTCAACGCCGCTCAGCGTCAGGAATTCGTTCATCTCTTCCGGCAGGTGCTGGAGAATGCCTACATCGACAAAAT CCTGTCCTATACGAATGAGAAAATTGTTTTTGACAGAGAGAGAATGCTGTCGGCAAACCAGGCCGAGGTTACGACGAGAA TTGTGACGTCTTCCAAGACGATTCCCATCACCTACCGGGTCATTCAGAAGGGAGGCATCTGGAAGGTCTATGACGTCGTT GTGGAGAACGTCAGTCTGATCCAGAATTACCGTACGCAGTTCAATGAAATCCTGAACGGTCAGAAGCCCGAACAACTGCT TCAGACCCTCAGGAAAAAGGTGAAGGAACAGCAGTAA
Upstream 100 bases:
>100_bases GGCGCTGGATATCGAGAACCTCGTCAGCAAGTACGCCTTCGGAGAGGTAAAAAAAGCGGACAGTACGGATAATACAGACA AAAAATAAAAAGGATGAATT
Downstream 100 bases:
>100_bases AATCCAGGCAAAACGAAAGAGGGGTTCTGTCCATGAAAAAGCTCCGCTTATCCGTTTTTTTTCTTCTTGTCCTTAGCATT GTTGCGGGTTCCGCCGATCG
Product: toluene tolerance protein
Products: NA
Alternate protein names: Luene Tolerance D; Luene Tolerance Protein; Luene Tolerance; Luene Tolerance Ttg2 Superfamily; Luene-Tolerance ABC-Type Export Protein; Signal Peptide Protein luene Tolerance D; Signal Peptide Protein; Luene Tolerance Transporter; Luene Tolerance-Like Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKRLFMNVIFLLLLLLPSSVFAGVPLDTVQVNVNKVLEVLRDPALKPASAKTVKKEKLRVIYERMFDEVELSRRALARHW NSLNAAQRQEFVHLFRQVLENAYIDKILSYTNEKIVFDRERMLSANQAEVTTRIVTSSKTIPITYRVIQKGGIWKVYDVV VENVSLIQNYRTQFNEILNGQKPEQLLQTLRKKVKEQQ
Sequences:
>Translated_198_residues MKRLFMNVIFLLLLLLPSSVFAGVPLDTVQVNVNKVLEVLRDPALKPASAKTVKKEKLRVIYERMFDEVELSRRALARHW NSLNAAQRQEFVHLFRQVLENAYIDKILSYTNEKIVFDRERMLSANQAEVTTRIVTSSKTIPITYRVIQKGGIWKVYDVV VENVSLIQNYRTQFNEILNGQKPEQLLQTLRKKVKEQQ >Mature_198_residues MKRLFMNVIFLLLLLLPSSVFAGVPLDTVQVNVNKVLEVLRDPALKPASAKTVKKEKLRVIYERMFDEVELSRRALARHW NSLNAAQRQEFVHLFRQVLENAYIDKILSYTNEKIVFDRERMLSANQAEVTTRIVTSSKTIPITYRVIQKGGIWKVYDVV VENVSLIQNYRTQFNEILNGQKPEQLLQTLRKKVKEQQ
Specific function: Unknown
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23101; Mature: 23101
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFMNVIFLLLLLLPSSVFAGVPLDTVQVNVNKVLEVLRDPALKPASAKTVKKEKLRV CHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECHHHHHHHHHCCCCCCCHHHHHHHHHHHH IYERMFDEVELSRRALARHWNSLNAAQRQEFVHLFRQVLENAYIDKILSYTNEKIVFDRE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHH RMLSANQAEVTTRIVTSSKTIPITYRVIQKGGIWKVYDVVVENVSLIQNYRTQFNEILNG HHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QKPEQLLQTLRKKVKEQQ CCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLFMNVIFLLLLLLPSSVFAGVPLDTVQVNVNKVLEVLRDPALKPASAKTVKKEKLRV CHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECHHHHHHHHHCCCCCCCHHHHHHHHHHHH IYERMFDEVELSRRALARHWNSLNAAQRQEFVHLFRQVLENAYIDKILSYTNEKIVFDRE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHH RMLSANQAEVTTRIVTSSKTIPITYRVIQKGGIWKVYDVVVENVSLIQNYRTQFNEILNG HHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QKPEQLLQTLRKKVKEQQ CCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA