Click here to switch to the map view.

The map label for this gene is 85858108

Identifier: 85858108

GI number: 85858108

Start: 279359

End: 280159

Strand: Direct

Name: 85858108

Synonym: SYN_01267

Alternate gene names: NA

Gene position: 279359-280159 (Clockwise)

Preceding gene: 85858107

Following gene: 85858110

Centisome position: 8.79

GC content: 50.81

Gene sequence:

>801_bases
ATGATTGAGAAAATTCTTAAATTCACAACGATTGTCTTTCTGATCTTATTTTTGATTTCAGGAACCGCTGCCGCGGGCGG
CCTTTTCGGTCCACCGCAGCCTCTTTCCAGGAAGGACGGCGGGTTGAATACCGCCATCGGATATGCGCACCATGAGAATA
AATTCGAGAATGGTGAAGAATACGTCATCAGGCAGAAGCAGATTTACTCGCAGGCAGCCTGGGGTGCCAGTAATCTCTGG
GAAGTATATGGAAGAATCGGCATCGCCGATCTGGAAATCGACGATGCCTTTCGATCCTCTGGATCGACAACGTCGTCCCG
ATTAGATTTCGAAGACAGGGAAAACATCTTTGGCGCCCTGGGGGCGAAGGTCTTCTATCCCTTCCGGAAGACCCTTGGAA
TCGGAATCTTCATCCAGGGTTCTTACTTCTTCAGCGACTTCAGGGACAACGTTTCGGGCATTTCAAATGGCAGATTTTAT
ACCACGGAACTCAAAGTGAAAAACCTCTGGGATATTGAATCGGGAATCGGTCTGCAGGCCGTAGGACCCTGTGGGATCAA
ACTGTATGCCGGACCCTATGTCTATTATTCCGAAGCCGATGTATCCCCGTCGAGGAGCATTGCGGGACTTCGATTGGCGG
CCGGCGAGGGTACGATAAAAAACAGGAGGGAGGCGGGAGGCTTTGCGGGTATTCTTGTGCCTCTGGGCAAAGGGTTTCAT
CTGAATATGGAAGGCCGGTATTCCGAGAAGTTTTCGGCTGGGATTGCCGTTTCCTACACCTATCAGAATCGCCGGCCGTA
A

Upstream 100 bases:

>100_bases
AAAAATGACCGGACGGTAAGGGTCGAGCAAGGGCATCCTTGCTGCAAAGCCTCAAGGAGACTGTGTCGCAGGCAGAACAA
AAGGAAATCGGGGGGACGGA

Downstream 100 bases:

>100_bases
GGTTTTTCGGCCTGAGGGCCTTCTCGCGGAATTATTGTATCTACAAGAAGTTATGAGGGGTCGGAAAGATCGGCGATTTT
TCCTGCGTAGTTTTTGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIEKILKFTTIVFLILFLISGTAAAGGLFGPPQPLSRKDGGLNTAIGYAHHENKFENGEEYVIRQKQIYSQAAWGASNLW
EVYGRIGIADLEIDDAFRSSGSTTSSRLDFEDRENIFGALGAKVFYPFRKTLGIGIFIQGSYFFSDFRDNVSGISNGRFY
TTELKVKNLWDIESGIGLQAVGPCGIKLYAGPYVYYSEADVSPSRSIAGLRLAAGEGTIKNRREAGGFAGILVPLGKGFH
LNMEGRYSEKFSAGIAVSYTYQNRRP

Sequences:

>Translated_266_residues
MIEKILKFTTIVFLILFLISGTAAAGGLFGPPQPLSRKDGGLNTAIGYAHHENKFENGEEYVIRQKQIYSQAAWGASNLW
EVYGRIGIADLEIDDAFRSSGSTTSSRLDFEDRENIFGALGAKVFYPFRKTLGIGIFIQGSYFFSDFRDNVSGISNGRFY
TTELKVKNLWDIESGIGLQAVGPCGIKLYAGPYVYYSEADVSPSRSIAGLRLAAGEGTIKNRREAGGFAGILVPLGKGFH
LNMEGRYSEKFSAGIAVSYTYQNRRP
>Mature_266_residues
MIEKILKFTTIVFLILFLISGTAAAGGLFGPPQPLSRKDGGLNTAIGYAHHENKFENGEEYVIRQKQIYSQAAWGASNLW
EVYGRIGIADLEIDDAFRSSGSTTSSRLDFEDRENIFGALGAKVFYPFRKTLGIGIFIQGSYFFSDFRDNVSGISNGRFY
TTELKVKNLWDIESGIGLQAVGPCGIKLYAGPYVYYSEADVSPSRSIAGLRLAAGEGTIKNRREAGGFAGILVPLGKGFH
LNMEGRYSEKFSAGIAVSYTYQNRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29209; Mature: 29209

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKILKFTTIVFLILFLISGTAAAGGLFGPPQPLSRKDGGLNTAIGYAHHENKFENGEE
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
YVIRQKQIYSQAAWGASNLWEVYGRIGIADLEIDDAFRSSGSTTSSRLDFEDRENIFGAL
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHH
GAKVFYPFRKTLGIGIFIQGSYFFSDFRDNVSGISNGRFYTTELKVKNLWDIESGIGLQA
HHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEECCEEECCCCCCEEE
VGPCGIKLYAGPYVYYSEADVSPSRSIAGLRLAAGEGTIKNRREAGGFAGILVPLGKGFH
ECCCCEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHCCCEEEEEEECCCCEE
LNMEGRYSEKFSAGIAVSYTYQNRRP
EEECCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MIEKILKFTTIVFLILFLISGTAAAGGLFGPPQPLSRKDGGLNTAIGYAHHENKFENGEE
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
YVIRQKQIYSQAAWGASNLWEVYGRIGIADLEIDDAFRSSGSTTSSRLDFEDRENIFGAL
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHH
GAKVFYPFRKTLGIGIFIQGSYFFSDFRDNVSGISNGRFYTTELKVKNLWDIESGIGLQA
HHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEECCEEECCCCCCEEE
VGPCGIKLYAGPYVYYSEADVSPSRSIAGLRLAAGEGTIKNRREAGGFAGILVPLGKGFH
ECCCCEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHCCCEEEEEEECCCCEE
LNMEGRYSEKFSAGIAVSYTYQNRRP
EEECCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA