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The map label for this gene is virA [H]

Identifier: 85858061

GI number: 85858061

Start: 221987

End: 223300

Strand: Direct

Name: virA [H]

Synonym: SYN_02581

Alternate gene names: 85858061

Gene position: 221987-223300 (Clockwise)

Preceding gene: 85858060

Following gene: 85858066

Centisome position: 6.98

GC content: 53.04

Gene sequence:

>1314_bases
TTGAAAATATTAGTATTTATTTTCTCGTCCTCTTTGGATTGTGCGTCACTTAAATGTTCCCACATTATCCTGTCTGCGGG
AATTCGTGGAGAAGGAGGTTTGCAGAGTATGAAAACGCTTCCGTTGTCGCGGTGCGGAGAGAAAGAGAATCTATCGTGGC
CGTTATTCTGCAGTAACCGGCGAAAAGAAACGGCAAAAAGGGAGAGTTCTGCCCGGGAACCTCTGGAATCTGATCAGAAT
AATCTCCGCCGGATTCTGGACAGTCTGGACGCCGGGGCTTACGTGACCGACATGGAAACCTGTGAGATTCTTTACATTAA
TCGCCATCTCCGGTATATCTGCGGCGATGTGGAAGGGCGAATCTGCTGGCAGGTCTTTCAGAAAAACCAGGATGGCCCCT
GTCCTTTCTGCAACAATGGGCGGCTGGTCAATGAAAGGGGAGAGCCTGAGCGGGTTCTGTTGCGGGAGGTCAAAAACACC
CGGAATCAGCGCTGGTATGAATGTCGGGACAGCGCCGTGTCCTGGTTCGACGGCCGGATTGTCCGTCTCGAAATCTTTAC
GGATATTACTGAACGGAAACGGAAGGAGGAAGAATACGCCCGGAAAATGAAGCTCGAGACCCTGTGTGTCCTGGCTGAGG
ATATCATCCATGACTTTAACAATCTGCTGTCCGTGAGCATGGGATATCTGTCGCTGGCTCGGCTGAATGTGCCGCCGTAC
GATCCGGCTTCGCAGTTCCTTGAAAAGACAGAGGAAGCTTTTATGAAATCCGGGAAACTGGCTGCCCGGCTGTTCGCTTT
AATCGGGCAGGAGGGCAAACCTTTCCATCGCAGAGTGTCTCCGGATGTTCTTCTGCTGGATTCTGTCCGCCTTTTTCTGA
GGGGGTCCGACCTCAAAAGCGCCTTTGTCCTTGCCGCCCCCCTTTGGACGGTTTGCGTCGATGAGAATCAGATCAGGCAG
GTGATCTTTCATCTTCTTCAGAACGCGCGGCAGGCCATGCCGCAAGGGGGGCAGGTAACTATCCGAGCGGAAAATGTTTT
TCTGAATGCCGGGGAGAAAGGGGATCTGCCTGTCGGTTCCTATGTCCGCTGGTCAGTTGAAGACCGGGGGATTGGCATTT
CTTCAGAGATTCTCCCCCGGGTATTCGATCCGGGTTTTGCTGCCTGGCCGGACGACAACCGAGAAAAATCCGGTTGGGGA
CTTGCTGTCTCCCGTTCGATTGTGCGCAGACATCAGGGGCTTATCGATTGCCGTTCGGAACCGGGAGTTGGAACAACGAT
GATTGTGTACCTGCCGGCGGAAACGGTTCCATGA

Upstream 100 bases:

>100_bases
GAATTGATTCATCAGATTTTACAGCTTTCGGGCGGGTTGCAGTTTTTACTGCCTTCCATCTACCGTGTCGTAGATTGAGC
CCATAAATGAGCTTGACCCA

Downstream 100 bases:

>100_bases
AAAAGCTGAGGGTGATTACCGTCCGGCATTACAGGTCCAGTGGCACAAGCGTGTCGAAAAAACGCATCCTAAGGCTTCGG
TCAGGGGGCAGCCCGGAGTA

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: WHR virA [H]

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKILVFIFSSSLDCASLKCSHIILSAGIRGEGGLQSMKTLPLSRCGEKENLSWPLFCSNRRKETAKRESSAREPLESDQN
NLRRILDSLDAGAYVTDMETCEILYINRHLRYICGDVEGRICWQVFQKNQDGPCPFCNNGRLVNERGEPERVLLREVKNT
RNQRWYECRDSAVSWFDGRIVRLEIFTDITERKRKEEEYARKMKLETLCVLAEDIIHDFNNLLSVSMGYLSLARLNVPPY
DPASQFLEKTEEAFMKSGKLAARLFALIGQEGKPFHRRVSPDVLLLDSVRLFLRGSDLKSAFVLAAPLWTVCVDENQIRQ
VIFHLLQNARQAMPQGGQVTIRAENVFLNAGEKGDLPVGSYVRWSVEDRGIGISSEILPRVFDPGFAAWPDDNREKSGWG
LAVSRSIVRRHQGLIDCRSEPGVGTTMIVYLPAETVP

Sequences:

>Translated_437_residues
MKILVFIFSSSLDCASLKCSHIILSAGIRGEGGLQSMKTLPLSRCGEKENLSWPLFCSNRRKETAKRESSAREPLESDQN
NLRRILDSLDAGAYVTDMETCEILYINRHLRYICGDVEGRICWQVFQKNQDGPCPFCNNGRLVNERGEPERVLLREVKNT
RNQRWYECRDSAVSWFDGRIVRLEIFTDITERKRKEEEYARKMKLETLCVLAEDIIHDFNNLLSVSMGYLSLARLNVPPY
DPASQFLEKTEEAFMKSGKLAARLFALIGQEGKPFHRRVSPDVLLLDSVRLFLRGSDLKSAFVLAAPLWTVCVDENQIRQ
VIFHLLQNARQAMPQGGQVTIRAENVFLNAGEKGDLPVGSYVRWSVEDRGIGISSEILPRVFDPGFAAWPDDNREKSGWG
LAVSRSIVRRHQGLIDCRSEPGVGTTMIVYLPAETVP
>Mature_437_residues
MKILVFIFSSSLDCASLKCSHIILSAGIRGEGGLQSMKTLPLSRCGEKENLSWPLFCSNRRKETAKRESSAREPLESDQN
NLRRILDSLDAGAYVTDMETCEILYINRHLRYICGDVEGRICWQVFQKNQDGPCPFCNNGRLVNERGEPERVLLREVKNT
RNQRWYECRDSAVSWFDGRIVRLEIFTDITERKRKEEEYARKMKLETLCVLAEDIIHDFNNLLSVSMGYLSLARLNVPPY
DPASQFLEKTEEAFMKSGKLAARLFALIGQEGKPFHRRVSPDVLLLDSVRLFLRGSDLKSAFVLAAPLWTVCVDENQIRQ
VIFHLLQNARQAMPQGGQVTIRAENVFLNAGEKGDLPVGSYVRWSVEDRGIGISSEILPRVFDPGFAAWPDDNREKSGWG
LAVSRSIVRRHQGLIDCRSEPGVGTTMIVYLPAETVP

Specific function: Activates virG, by phosphorylating it, in the presence of acetosyringone or hydroxysyringone [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=257, Percent_Identity=28.4046692607004, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=27.5303643724696, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49561; Mature: 49561

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVFIFSSSLDCASLKCSHIILSAGIRGEGGLQSMKTLPLSRCGEKENLSWPLFCSNR
CEEEEEEECCCCCHHHHHHHEEEEECCCCCCCCHHHHHCCCHHHCCCCCCCCCCEEECCC
RKETAKRESSAREPLESDQNNLRRILDSLDAGAYVTDMETCEILYINRHLRYICGDVEGR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECHHHHHHCCCCCH
ICWQVFQKNQDGPCPFCNNGRLVNERGEPERVLLREVKNTRNQRWYECRDSAVSWFDGRI
HHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
VRLEIFTDITERKRKEEEYARKMKLETLCVLAEDIIHDFNNLLSVSMGYLSLARLNVPPY
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
DPASQFLEKTEEAFMKSGKLAARLFALIGQEGKPFHRRVSPDVLLLDSVRLFLRGSDLKS
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHCCCCCHH
AFVLAAPLWTVCVDENQIRQVIFHLLQNARQAMPQGGQVTIRAENVFLNAGEKGDLPVGS
HHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCC
YVRWSVEDRGIGISSEILPRVFDPGFAAWPDDNREKSGWGLAVSRSIVRRHQGLIDCRSE
EEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCC
PGVGTTMIVYLPAETVP
CCCCEEEEEEECCCCCC
>Mature Secondary Structure
MKILVFIFSSSLDCASLKCSHIILSAGIRGEGGLQSMKTLPLSRCGEKENLSWPLFCSNR
CEEEEEEECCCCCHHHHHHHEEEEECCCCCCCCHHHHHCCCHHHCCCCCCCCCCEEECCC
RKETAKRESSAREPLESDQNNLRRILDSLDAGAYVTDMETCEILYINRHLRYICGDVEGR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECHHHHHHCCCCCH
ICWQVFQKNQDGPCPFCNNGRLVNERGEPERVLLREVKNTRNQRWYECRDSAVSWFDGRI
HHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
VRLEIFTDITERKRKEEEYARKMKLETLCVLAEDIIHDFNNLLSVSMGYLSLARLNVPPY
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
DPASQFLEKTEEAFMKSGKLAARLFALIGQEGKPFHRRVSPDVLLLDSVRLFLRGSDLKS
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHCCCCCHH
AFVLAAPLWTVCVDENQIRQVIFHLLQNARQAMPQGGQVTIRAENVFLNAGEKGDLPVGS
HHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCC
YVRWSVEDRGIGISSEILPRVFDPGFAAWPDDNREKSGWGLAVSRSIVRRHQGLIDCRSE
EEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCC
PGVGTTMIVYLPAETVP
CCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3595559 [H]