| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858060
Identifier: 85858060
GI number: 85858060
Start: 221304
End: 221684
Strand: Direct
Name: 85858060
Synonym: SYN_03293
Alternate gene names: NA
Gene position: 221304-221684 (Clockwise)
Preceding gene: 85858054
Following gene: 85858061
Centisome position: 6.96
GC content: 47.51
Gene sequence:
>381_bases ATGACAACGGCGGAAGGGGCAAGCTTAGTAAAGCCCTCGCTAGATTTTAATGCGGATGTTGCGATTACTTCGCCAACTAT TGCGATAACAAGAAAAAGCCAGCCTTTCATGATATATCTCCCAATTTGTGTTCGGAAAGAAATTGTGAAAACAAGGCTTC TGGAGCTTGACGATGAGCTTGCCAGTCCTATTTCTGGAAAAATCCGGGAAGCTCCTGTCTTCTGTTCTGAAATTGCCGGT GGACAGGCAACAGCCGCAAGCGCCCTGAAGGGAGATAGCATGCCGGATAGAGAGCCGGATATCAGGCCTCTTGAACTTCA AGGCAAGGGAAACGATCACATCAAGATGACCAGAAATGCTGCCCGATGCCATGTTCTATAA
Upstream 100 bases:
>100_bases TATGACGACGCCGAGTCCCGACCAGACTGCATAAGCAACACCGACAGGGATGGATTTCAGAACCAGAGAAAGAAAATAAA ATGCGATGCCATAACCGATT
Downstream 100 bases:
>100_bases GCGATTTTCGAATCCTTGAGGCACGGTAACTCGCTTGAAAAGGAATGAAGAGTGAGTATTTCGGACGCAACGTATCCGAT TTGATAAGGCCTGTCAATCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTTAEGASLVKPSLDFNADVAITSPTIAITRKSQPFMIYLPICVRKEIVKTRLLELDDELASPISGKIREAPVFCSEIAG GQATAASALKGDSMPDREPDIRPLELQGKGNDHIKMTRNAARCHVL
Sequences:
>Translated_126_residues MTTAEGASLVKPSLDFNADVAITSPTIAITRKSQPFMIYLPICVRKEIVKTRLLELDDELASPISGKIREAPVFCSEIAG GQATAASALKGDSMPDREPDIRPLELQGKGNDHIKMTRNAARCHVL >Mature_125_residues TTAEGASLVKPSLDFNADVAITSPTIAITRKSQPFMIYLPICVRKEIVKTRLLELDDELASPISGKIREAPVFCSEIAGG QATAASALKGDSMPDREPDIRPLELQGKGNDHIKMTRNAARCHVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13632; Mature: 13501
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAEGASLVKPSLDFNADVAITSPTIAITRKSQPFMIYLPICVRKEIVKTRLLELDDEL CCCCCCCEEECCCCCCCCEEEEECCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHCHHH ASPISGKIREAPVFCSEIAGGQATAASALKGDSMPDREPDIRPLELQGKGNDHIKMTRNA CCCCCCCCCCCCEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCC ARCHVL EEEECC >Mature Secondary Structure TTAEGASLVKPSLDFNADVAITSPTIAITRKSQPFMIYLPICVRKEIVKTRLLELDDEL CCCCCCEEECCCCCCCCEEEEECCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHCHHH ASPISGKIREAPVFCSEIAGGQATAASALKGDSMPDREPDIRPLELQGKGNDHIKMTRNA CCCCCCCCCCCCEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCC ARCHVL EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA