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The map label for this gene is pss [H]

Identifier: 85375278

GI number: 85375278

Start: 2477241

End: 2478635

Strand: Reverse

Name: pss [H]

Synonym: ELI_12255

Alternate gene names: 85375278

Gene position: 2478635-2477241 (Counterclockwise)

Preceding gene: 85375279

Following gene: 85375276

Centisome position: 81.2

GC content: 64.44

Gene sequence:

>1395_bases
GTGAACGCGCTTCCGGAAATCAAGGACATGGAATTACGGGGAGAATTGCTCCCCGCGCCTTCGCTCGAGCGGCGTCGCCT
GCGCGCCTACCTGCTGTTCGTGGTCACCGATGTTGCCGCGATCTTCATCGCCTTCCTCGCTGCCGGTGCCCTCTACCTGC
AGCGCTTTCCCGACCCGCAGGCATCGAACCAGGCCTACCTGCTGCTGCCGATCTACCTCACGATCGCGCTTTACCAGGGG
ACCTATTCGATCCGGACGCTGTTCGACTACCGCTTCGCCATATCGCGGTCTTTCGGGGCGCTGGCGATCTCGGCAGCCCT
GCTCGCCTTCGTGGCCTTCTACCTGAAGGCAGGGGCGTCCTTCTCCCGCGTGACGCTAACCCTCGGCCTCGTCGGCGCGG
GCGTGCTGATTGCGCTTTCCCGCCGGATAGCCGTCCATCTCATCGAGCGGCGCTGGGACGGCTTCGTGCGCAACCGGCTG
CATATTCGCGACGGCGGCGACGAGCTCGCCATACCTTTCAACTGCATCGTCGACGCGCGAGCGGCCGGCATCGACCCCGA
GGCGGACGATCCCCATTCGCTCGATCTCCTGGGGCGGTTGCTGCTGAATCAGGACGAAGTGGTGGTCAGCTGCCCGCTCG
ACCGGCGCGCGGCATGGGCGTTTGTGCTCAAGGCCAACGGCGTGCATGGCGAAATCCTCAGCCCGACGGCGCACGAACTC
GGCGCGCTCAATGTAAAGCATTACGAAGCGGCGGATGCCTCTACCCTTGTCGTGAGCGCAGGGCCGCTCGGCCTGCGTGC
CCGGGCATTGAAGCGCGCTTTCGACATCGCATTCTCGACGCTCGCGCTTATCCTGCTCCTGCCTTTTCTTTGCCTCCTGG
CACTGGCGATCTGGCTGGAAGATCGCGGGCCGGTGCTGTTCGTCCAGCAACGCACCGGCAGGGGCAACCGCTTCTTTCGG
ATGTACAAATTCCGGTCGATGCGGACCGACAGTAGCGATGCCGACGGGGATCGCTCAACCGCGCGCGGGGACAATCGCCT
GACCAGGATCGGCCGCTTCATCCGCGCCTACAGCATCGACGAACTCCCGCAATTGCTCAACGTACTGAAGGGCGAGATGA
GCATCGTCGGGCCTCGCCCGCATGCGCCCGGAAGTCTCGCCGGCGAGAAGAAATTCTGGCAGGTCGATGCGCGCTACTGG
CATCGCCATGCGCTCAAGCCCGGACTGACCGGGCTCGCCCAGGTGAGGGGTTTTCGCGGAACTGCCGAGAGGGAGCGCGA
TCTCTCGGACCGATTGCAAGCCGATCTCGAATATCTCGCGCACTGGTCGCTCTTCCGCGATCTGGCGATCATCGCGCAGA
CCCTGCTCGTGTTGCGCCACGACCGGGCCTATTGA

Upstream 100 bases:

>100_bases
CGCGTTGACCGCATCTATATTTAGCGGTTATTCATATACTTGGGGCGGCCGGTCATGCACAGCGTGTGTTATGGCGCACA
ATGGGATGGGACTGCCTCGA

Downstream 100 bases:

>100_bases
TCTCGAGCAGCATGAAAAGGCCACCGCTGCGATGGCAGGGCGGCCTTCGAACCTGGAAAAACCGGAAGGGGTCTAGCGCG
GGCTGTTGCCCGAGCTGCTG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MNALPEIKDMELRGELLPAPSLERRRLRAYLLFVVTDVAAIFIAFLAAGALYLQRFPDPQASNQAYLLLPIYLTIALYQG
TYSIRTLFDYRFAISRSFGALAISAALLAFVAFYLKAGASFSRVTLTLGLVGAGVLIALSRRIAVHLIERRWDGFVRNRL
HIRDGGDELAIPFNCIVDARAAGIDPEADDPHSLDLLGRLLLNQDEVVVSCPLDRRAAWAFVLKANGVHGEILSPTAHEL
GALNVKHYEAADASTLVVSAGPLGLRARALKRAFDIAFSTLALILLLPFLCLLALAIWLEDRGPVLFVQQRTGRGNRFFR
MYKFRSMRTDSSDADGDRSTARGDNRLTRIGRFIRAYSIDELPQLLNVLKGEMSIVGPRPHAPGSLAGEKKFWQVDARYW
HRHALKPGLTGLAQVRGFRGTAERERDLSDRLQADLEYLAHWSLFRDLAIIAQTLLVLRHDRAY

Sequences:

>Translated_464_residues
MNALPEIKDMELRGELLPAPSLERRRLRAYLLFVVTDVAAIFIAFLAAGALYLQRFPDPQASNQAYLLLPIYLTIALYQG
TYSIRTLFDYRFAISRSFGALAISAALLAFVAFYLKAGASFSRVTLTLGLVGAGVLIALSRRIAVHLIERRWDGFVRNRL
HIRDGGDELAIPFNCIVDARAAGIDPEADDPHSLDLLGRLLLNQDEVVVSCPLDRRAAWAFVLKANGVHGEILSPTAHEL
GALNVKHYEAADASTLVVSAGPLGLRARALKRAFDIAFSTLALILLLPFLCLLALAIWLEDRGPVLFVQQRTGRGNRFFR
MYKFRSMRTDSSDADGDRSTARGDNRLTRIGRFIRAYSIDELPQLLNVLKGEMSIVGPRPHAPGSLAGEKKFWQVDARYW
HRHALKPGLTGLAQVRGFRGTAERERDLSDRLQADLEYLAHWSLFRDLAIIAQTLLVLRHDRAY
>Mature_464_residues
MNALPEIKDMELRGELLPAPSLERRRLRAYLLFVVTDVAAIFIAFLAAGALYLQRFPDPQASNQAYLLLPIYLTIALYQG
TYSIRTLFDYRFAISRSFGALAISAALLAFVAFYLKAGASFSRVTLTLGLVGAGVLIALSRRIAVHLIERRWDGFVRNRL
HIRDGGDELAIPFNCIVDARAAGIDPEADDPHSLDLLGRLLLNQDEVVVSCPLDRRAAWAFVLKANGVHGEILSPTAHEL
GALNVKHYEAADASTLVVSAGPLGLRARALKRAFDIAFSTLALILLLPFLCLLALAIWLEDRGPVLFVQQRTGRGNRFFR
MYKFRSMRTDSSDADGDRSTARGDNRLTRIGRFIRAYSIDELPQLLNVLKGEMSIVGPRPHAPGSLAGEKKFWQVDARYW
HRHALKPGLTGLAQVRGFRGTAERERDLSDRLQADLEYLAHWSLFRDLAIIAQTLLVLRHDRAY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=225, Percent_Identity=39.5555555555556, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 51757; Mature: 51757

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALPEIKDMELRGELLPAPSLERRRLRAYLLFVVTDVAAIFIAFLAAGALYLQRFPDPQ
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ASNQAYLLLPIYLTIALYQGTYSIRTLFDYRFAISRSFGALAISAALLAFVAFYLKAGAS
CCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
FSRVTLTLGLVGAGVLIALSRRIAVHLIERRWDGFVRNRLHIRDGGDELAIPFNCIVDAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEHHHEEECH
AAGIDPEADDPHSLDLLGRLLLNQDEVVVSCPLDRRAAWAFVLKANGVHGEILSPTAHEL
HCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHH
GALNVKHYEAADASTLVVSAGPLGLRARALKRAFDIAFSTLALILLLPFLCLLALAIWLE
CCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRGPVLFVQQRTGRGNRFFRMYKFRSMRTDSSDADGDRSTARGDNRLTRIGRFIRAYSID
CCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHH
ELPQLLNVLKGEMSIVGPRPHAPGSLAGEKKFWQVDARYWHRHALKPGLTGLAQVRGFRG
HHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCCHHHHHHHCCCCC
TAERERDLSDRLQADLEYLAHWSLFRDLAIIAQTLLVLRHDRAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNALPEIKDMELRGELLPAPSLERRRLRAYLLFVVTDVAAIFIAFLAAGALYLQRFPDPQ
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ASNQAYLLLPIYLTIALYQGTYSIRTLFDYRFAISRSFGALAISAALLAFVAFYLKAGAS
CCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
FSRVTLTLGLVGAGVLIALSRRIAVHLIERRWDGFVRNRLHIRDGGDELAIPFNCIVDAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEHHHEEECH
AAGIDPEADDPHSLDLLGRLLLNQDEVVVSCPLDRRAAWAFVLKANGVHGEILSPTAHEL
HCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHH
GALNVKHYEAADASTLVVSAGPLGLRARALKRAFDIAFSTLALILLLPFLCLLALAIWLE
CCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRGPVLFVQQRTGRGNRFFRMYKFRSMRTDSSDADGDRSTARGDNRLTRIGRFIRAYSID
CCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHH
ELPQLLNVLKGEMSIVGPRPHAPGSLAGEKKFWQVDARYWHRHALKPGLTGLAQVRGFRG
HHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCCHHHHHHHCCCCC
TAERERDLSDRLQADLEYLAHWSLFRDLAIIAQTLLVLRHDRAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2851702 [H]