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The map label for this gene is 85375279

Identifier: 85375279

GI number: 85375279

Start: 2478728

End: 2479765

Strand: Reverse

Name: 85375279

Synonym: ELI_12260

Alternate gene names: NA

Gene position: 2479765-2478728 (Counterclockwise)

Preceding gene: 85375280

Following gene: 85375278

Centisome position: 81.24

GC content: 66.96

Gene sequence:

>1038_bases
GTGAAAGCGACGCAGCGGGATTTTCCCGGCATCGCCACCAAGGCTGCGCGACAGTGTTCGGTTTTCTTCTTTTGCGGTCC
TGACGAAGCGGGCGCTTCCGCCGCCGCCGAGGCCGTCTGTGGGGCACTGGCCGATCCGGGCGAACGCATCGAATTGAGCG
GCGCCGACCTGAAGCGCGATCCGGTGGCCTTGGGCGACGAAGCGCGGTCATCCTCCCTGTTCGGCGACGCGCGGCATATC
TTCGTGCGGGCCAATGGCGACGAAGCGCACGATGCGCTTGCCAACCTGTTCGCAGGGGAAGGCGATGCCTGTCCCGTGCT
GGTCGTCGCCAGCGCTGCGACCGACAAGTCGCGCACCGCTAAGCTGCTGGCCAGGCGCGAGGATGCGCTGGTGGCCATGC
TTTATCCGCCCGATTTGCGCAGCATGACCGCGACGGTGCGCGATCTCGCCGACACGGCGGGTGTGCGGCTCGGGGGCGAT
CTGGCCGAACGGATTGCGCGGGCGGCAACGCTCGACCAGCGGCTCGCGCGTTCGGAAATCGAGAAGCTGGCGCTCTACCT
TGATGCTGCGCCGGCCACGCCCAAGCAGGCCGACGCGCAGGACTGGCACGCCATCGGGGCCAAGACCGAAGAAGACGGCT
TCATGCCGATCGTCAATGCCGCGCTCGGCGGTCATGCCAAGCGGCTGCCTGGCGAGCTCCAGCGCATGCGCGAATTGTCG
ATCAACAGCGTCGCGATCGCGCTGGCGGTCGAGCGGCGTACGGCACAATTGGCACAACTGGCCGGCAGGCTGGGCCGTAG
CGGCGACGTCGACGGTTTCATTCAGTCCGAAAAGCAGGCGCGCCGGATTTTCTGGAAGGACGAACGCGATTTGCGCGAGC
AATTGCGCATCTGGCGCGGGGCAAGGCTCGACCGGCTCGTCGAACGGGTCACGGCGCTTCATCGCAGCCTGCTGGCAAAC
AGCCAGTCGGGCGAATTGCTGCTGGCGCAGGAACTGACCACGATAGCACGTGCGGCGGCAGCGGCCGGAGCGCGTTGA

Upstream 100 bases:

>100_bases
ACGCCACCATCGCCGCCGAACAGACCGCGCTCGAAAGGCTCACTGAAGAGGTGGCCGATCGCATCGTCAGGCGGATTTCG
CTGGCGTTGAGGGAACCGCA

Downstream 100 bases:

>100_bases
CCGCATCTATATTTAGCGGTTATTCATATACTTGGGGCGGCCGGTCATGCACAGCGTGTGTTATGGCGCACAATGGGATG
GGACTGCCTCGAGTGAACGC

Product: DNA polymerase III delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKATQRDFPGIATKAARQCSVFFFCGPDEAGASAAAEAVCGALADPGERIELSGADLKRDPVALGDEARSSSLFGDARHI
FVRANGDEAHDALANLFAGEGDACPVLVVASAATDKSRTAKLLARREDALVAMLYPPDLRSMTATVRDLADTAGVRLGGD
LAERIARAATLDQRLARSEIEKLALYLDAAPATPKQADAQDWHAIGAKTEEDGFMPIVNAALGGHAKRLPGELQRMRELS
INSVAIALAVERRTAQLAQLAGRLGRSGDVDGFIQSEKQARRIFWKDERDLREQLRIWRGARLDRLVERVTALHRSLLAN
SQSGELLLAQELTTIARAAAAAGAR

Sequences:

>Translated_345_residues
MKATQRDFPGIATKAARQCSVFFFCGPDEAGASAAAEAVCGALADPGERIELSGADLKRDPVALGDEARSSSLFGDARHI
FVRANGDEAHDALANLFAGEGDACPVLVVASAATDKSRTAKLLARREDALVAMLYPPDLRSMTATVRDLADTAGVRLGGD
LAERIARAATLDQRLARSEIEKLALYLDAAPATPKQADAQDWHAIGAKTEEDGFMPIVNAALGGHAKRLPGELQRMRELS
INSVAIALAVERRTAQLAQLAGRLGRSGDVDGFIQSEKQARRIFWKDERDLREQLRIWRGARLDRLVERVTALHRSLLAN
SQSGELLLAQELTTIARAAAAAGAR
>Mature_345_residues
MKATQRDFPGIATKAARQCSVFFFCGPDEAGASAAAEAVCGALADPGERIELSGADLKRDPVALGDEARSSSLFGDARHI
FVRANGDEAHDALANLFAGEGDACPVLVVASAATDKSRTAKLLARREDALVAMLYPPDLRSMTATVRDLADTAGVRLGGD
LAERIARAATLDQRLARSEIEKLALYLDAAPATPKQADAQDWHAIGAKTEEDGFMPIVNAALGGHAKRLPGELQRMRELS
INSVAIALAVERRTAQLAQLAGRLGRSGDVDGFIQSEKQARRIFWKDERDLREQLRIWRGARLDRLVERVTALHRSLLAN
SQSGELLLAQELTTIARAAAAAGAR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 36953; Mature: 36953

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATQRDFPGIATKAARQCSVFFFCGPDEAGASAAAEAVCGALADPGERIELSGADLKRD
CCCCCCCCCCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCC
PVALGDEARSSSLFGDARHIFVRANGDEAHDALANLFAGEGDACPVLVVASAATDKSRTA
CCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH
KLLARREDALVAMLYPPDLRSMTATVRDLADTAGVRLGGDLAERIARAATLDQRLARSEI
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKLALYLDAAPATPKQADAQDWHAIGAKTEEDGFMPIVNAALGGHAKRLPGELQRMRELS
HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHCC
INSVAIALAVERRTAQLAQLAGRLGRSGDVDGFIQSEKQARRIFWKDERDLREQLRIWRG
CCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHCCCCCHHHHHHHHHHHHC
ARLDRLVERVTALHRSLLANSQSGELLLAQELTTIARAAAAAGAR
CHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKATQRDFPGIATKAARQCSVFFFCGPDEAGASAAAEAVCGALADPGERIELSGADLKRD
CCCCCCCCCCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCC
PVALGDEARSSSLFGDARHIFVRANGDEAHDALANLFAGEGDACPVLVVASAATDKSRTA
CCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH
KLLARREDALVAMLYPPDLRSMTATVRDLADTAGVRLGGDLAERIARAATLDQRLARSEI
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKLALYLDAAPATPKQADAQDWHAIGAKTEEDGFMPIVNAALGGHAKRLPGELQRMRELS
HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHCC
INSVAIALAVERRTAQLAQLAGRLGRSGDVDGFIQSEKQARRIFWKDERDLREQLRIWRG
CCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHCCCCCHHHHHHHHHHHHC
ARLDRLVERVTALHRSLLANSQSGELLLAQELTTIARAAAAAGAR
CHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA