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The map label for this gene is csgA [H]

Identifier: 85374185

GI number: 85374185

Start: 1406639

End: 1407373

Strand: Reverse

Name: csgA [H]

Synonym: ELI_06790

Alternate gene names: 85374185

Gene position: 1407373-1406639 (Counterclockwise)

Preceding gene: 85374189

Following gene: 85374183

Centisome position: 46.11

GC content: 64.49

Gene sequence:

>735_bases
ATGAGCGATGTAAGACAGCAATTCGAGCGGGCGGCGGTGTTCGGGGCCAGCGGCGGCATCGGCCGCGCCCTGGTCGAGGC
ATTGGCGGATGCGGGCATCGGAAAGATTTACGCCGGATCGCGCAGCGGTCTCACTCACGAAGGTGACAACGTCCATCCTT
TCCGCTTCGACTATGACGAGCCAGCGACCCTGGCCGACGCTGCCGAAGCGATGGCCGACGAGCCGCCTCAACTGGTCATA
GTCGCCACCGGAGTGCTGACGCTAGGGAACGGCAGCGGGCCCGAACGCAGTTTCAAGCAGATCGAGAGCGAAGCGATGGA
AAGGGTGCTGCGGATCAACACGATCGGCCCCGCACTGGTGGCCAAATTCGTGCTGCCGCTCTTTCCGCGCGATCGGCGCG
CAGTCTTTGCCGCGCTCTCGGCGCGCGTCGGTTCGATCGGCGACAACGGCATCGGCGGCTGGCACAGCTACCGCGCTTCG
AAGGCTGCGCTCAACATGCTGGTCAGGAATTTCGCCATCGAGCTTCGGCGCACGCACAAGCAGGCCGTGGCAGTGTCCTT
GCATCCGGGCACGGTCGACACCGCGCTTTCGCAGCCATTCCAGTCCAACCTTCCCGAGGGGCAGCTGACAAATCCGGCGG
AATCGGCGCGCAATTTGCTGCGCGTAATCGAGGGCCTTTCGCCCGAGGACAGCGGCCATCAGTTCGACTGGAAAGGCGAG
CGGGTACCCGACTAG

Upstream 100 bases:

>100_bases
TGGACCACTGTCCAGGGCCAGAAAAGTCGCCGCCGCGTTTTGTGGCGGAGAGCGCGATCGTTTCGGGGAACCTCGAAGCC
ATGCGGCGGGTCTAACCTGT

Downstream 100 bases:

>100_bases
GGTTACTCACCACATCCCTTCGCCCTGAACCTGTCGAAGGGCAGGCTAAATGTTGCGGCTGGGCTTCGCCCTTCGACCAG
CTCAGGACCTCAGCCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: C signal [H]

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSDVRQQFERAAVFGASGGIGRALVEALADAGIGKIYAGSRSGLTHEGDNVHPFRFDYDEPATLADAAEAMADEPPQLVI
VATGVLTLGNGSGPERSFKQIESEAMERVLRINTIGPALVAKFVLPLFPRDRRAVFAALSARVGSIGDNGIGGWHSYRAS
KAALNMLVRNFAIELRRTHKQAVAVSLHPGTVDTALSQPFQSNLPEGQLTNPAESARNLLRVIEGLSPEDSGHQFDWKGE
RVPD

Sequences:

>Translated_244_residues
MSDVRQQFERAAVFGASGGIGRALVEALADAGIGKIYAGSRSGLTHEGDNVHPFRFDYDEPATLADAAEAMADEPPQLVI
VATGVLTLGNGSGPERSFKQIESEAMERVLRINTIGPALVAKFVLPLFPRDRRAVFAALSARVGSIGDNGIGGWHSYRAS
KAALNMLVRNFAIELRRTHKQAVAVSLHPGTVDTALSQPFQSNLPEGQLTNPAESARNLLRVIEGLSPEDSGHQFDWKGE
RVPD
>Mature_243_residues
SDVRQQFERAAVFGASGGIGRALVEALADAGIGKIYAGSRSGLTHEGDNVHPFRFDYDEPATLADAAEAMADEPPQLVIV
ATGVLTLGNGSGPERSFKQIESEAMERVLRINTIGPALVAKFVLPLFPRDRRAVFAALSARVGSIGDNGIGGWHSYRASK
AALNMLVRNFAIELRRTHKQAVAVSLHPGTVDTALSQPFQSNLPEGQLTNPAESARNLLRVIEGLSPEDSGHQFDWKGER
VPD

Specific function: Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast YKL071W [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 26167; Mature: 26036

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVRQQFERAAVFGASGGIGRALVEALADAGIGKIYAGSRSGLTHEGDNVHPFRFDYDE
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCC
PATLADAAEAMADEPPQLVIVATGVLTLGNGSGPERSFKQIESEAMERVLRINTIGPALV
CHHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AKFVLPLFPRDRRAVFAALSARVGSIGDNGIGGWHSYRASKAALNMLVRNFAIELRRTHK
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVAVSLHPGTVDTALSQPFQSNLPEGQLTNPAESARNLLRVIEGLSPEDSGHQFDWKGE
HEEEEEECCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RVPD
CCCC
>Mature Secondary Structure 
SDVRQQFERAAVFGASGGIGRALVEALADAGIGKIYAGSRSGLTHEGDNVHPFRFDYDE
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCC
PATLADAAEAMADEPPQLVIVATGVLTLGNGSGPERSFKQIESEAMERVLRINTIGPALV
CHHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AKFVLPLFPRDRRAVFAALSARVGSIGDNGIGGWHSYRASKAALNMLVRNFAIELRRTHK
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVAVSLHPGTVDTALSQPFQSNLPEGQLTNPAESARNLLRVIEGLSPEDSGHQFDWKGE
HEEEEEECCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RVPD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152896; 2107980; 2118510; 1372277 [H]