Click here to switch to the map view.

The map label for this gene is yafE [C]

Identifier: 85374183

GI number: 85374183

Start: 1404710

End: 1405345

Strand: Reverse

Name: yafE [C]

Synonym: ELI_06780

Alternate gene names: 85374183

Gene position: 1405345-1404710 (Counterclockwise)

Preceding gene: 85374185

Following gene: 85374181

Centisome position: 46.04

GC content: 64.78

Gene sequence:

>636_bases
ATGGGACTGGGCAGTTGGTGGGACCGGCACGGCGTGCCGCGCGTGATCAAGTTCGCCTGCGGCATGCCGGCGATCATGAA
GCTGCGCAGCCGGGTCATACCCATGGCGACGGGCGACGTTTTCGAACTCGGCTGCGGCGGAGGGATAAACCAGCAATTCT
ACAACGCCGCTGCGATCGACAGCTATGCCGGGATCGATCCCGGCGGGAAGCTGCTGGAATATGCGCGCGCCGAGGCGGAG
AAGAAAGGCTGGAAAGCCGATATCCGCGACGGGATCGGGGAGGAGATTCCCTTTGCAGACAACAGCTTCGACACGGTCGT
CTGCACCTATACCATGTGCTCGGTTCAGGACCAGCCGCAGGTGGTGAAGGAGATGCGCCGCATCCTGAGGCCGGGCGGTC
GTTTGCTGTTTTTGGAACACGGGCGCGCGCCGGATGCCGATGTCGCGCGGTTCCAGGATCGGCTCGAGCCATGGTGGAAG
CCGTTCGCGGGGGGATGCCACCTGACCCGGCCCGTGACCGAGGCTGTGCGGGCAGGGGGCTTCGACGTCGAGCCTATGGG
GGCCGCCTATCTGCCGAAGACGCCCAAGTCGATCGGCTGGAACGAATGGGGTATCGGGCGAAAAGTGGGCGCGTGA

Upstream 100 bases:

>100_bases
GAAGCGAAAAGCGCCATGCAGAGCGGTGTGAGCGGCGGAGGACACTCCCCACAATCGCGGATTTATGGCACTATGCACCC
AAGCGAGGGGAGAAAACGCA

Downstream 100 bases:

>100_bases
TCGAGGCCTGGGCCTGACCGCCGCGCCCACCTGTTTCTAGCAATTATTCGTCACCGAAGGTGCGCTGCCACCAGCCGCGG
CGGGGTTTCCCATCGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Phosphatidylethanolamine N-Methyltransferase; Methyltransferase UbiE/COQ5 Family; Ubiquinone Biosynthesis O-Methyltransferase; Methyltransferase Domain Family; SAM-Dependent Methyltransferase UbiE/COQ5 Family; Phospholipid Methyltransferase; Sam Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Generic Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyl Transferase; Methyltransferase Domain Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase; UbiE/COQ5 Methyltransferase; Response Regulator Receiver Protein

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MGLGSWWDRHGVPRVIKFACGMPAIMKLRSRVIPMATGDVFELGCGGGINQQFYNAAAIDSYAGIDPGGKLLEYARAEAE
KKGWKADIRDGIGEEIPFADNSFDTVVCTYTMCSVQDQPQVVKEMRRILRPGGRLLFLEHGRAPDADVARFQDRLEPWWK
PFAGGCHLTRPVTEAVRAGGFDVEPMGAAYLPKTPKSIGWNEWGIGRKVGA

Sequences:

>Translated_211_residues
MGLGSWWDRHGVPRVIKFACGMPAIMKLRSRVIPMATGDVFELGCGGGINQQFYNAAAIDSYAGIDPGGKLLEYARAEAE
KKGWKADIRDGIGEEIPFADNSFDTVVCTYTMCSVQDQPQVVKEMRRILRPGGRLLFLEHGRAPDADVARFQDRLEPWWK
PFAGGCHLTRPVTEAVRAGGFDVEPMGAAYLPKTPKSIGWNEWGIGRKVGA
>Mature_210_residues
GLGSWWDRHGVPRVIKFACGMPAIMKLRSRVIPMATGDVFELGCGGGINQQFYNAAAIDSYAGIDPGGKLLEYARAEAEK
KGWKADIRDGIGEEIPFADNSFDTVVCTYTMCSVQDQPQVVKEMRRILRPGGRLLFLEHGRAPDADVARFQDRLEPWWKP
FAGGCHLTRPVTEAVRAGGFDVEPMGAAYLPKTPKSIGWNEWGIGRKVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI164663805, Length=175, Percent_Identity=35.4285714285714, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI89145417, Length=196, Percent_Identity=30.1020408163265, Blast_Score=81, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23214; Mature: 23083

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLGSWWDRHGVPRVIKFACGMPAIMKLRSRVIPMATGDVFELGCGGGINQQFYNAAAID
CCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHH
SYAGIDPGGKLLEYARAEAEKKGWKADIRDGIGEEIPFADNSFDTVVCTYTMCSVQDQPQ
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHH
VVKEMRRILRPGGRLLFLEHGRAPDADVARFQDRLEPWWKPFAGGCHLTRPVTEAVRAGG
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
FDVEPMGAAYLPKTPKSIGWNEWGIGRKVGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLGSWWDRHGVPRVIKFACGMPAIMKLRSRVIPMATGDVFELGCGGGINQQFYNAAAID
CCCCCHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHH
SYAGIDPGGKLLEYARAEAEKKGWKADIRDGIGEEIPFADNSFDTVVCTYTMCSVQDQPQ
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHH
VVKEMRRILRPGGRLLFLEHGRAPDADVARFQDRLEPWWKPFAGGCHLTRPVTEAVRAGG
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
FDVEPMGAAYLPKTPKSIGWNEWGIGRKVGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA