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The map label for this gene is dsbE [H]

Identifier: 85373602

GI number: 85373602

Start: 800553

End: 801095

Strand: Direct

Name: dsbE [H]

Synonym: ELI_03875

Alternate gene names: 85373602

Gene position: 800553-801095 (Clockwise)

Preceding gene: 85373601

Following gene: 85373603

Centisome position: 26.23

GC content: 65.01

Gene sequence:

>543_bases
ATGAACAAGCTGCTGATCTGGGGGCCGCTGGCGCTGTTCCTGTTCTTTGCCGGGGTGGCGGGATACCAGTTGACCCAGCC
GAAGGACGAGACCGTGCGCAGCGCGATGGTCGGCAAACCGCTGCCGGCCTTCGACCTGCCGGCTTATGATCCGGCGGGCG
AGGGCGATGGGCCAGCGCGGATCACCGACGCGATCTTTCGTGACGGCAGGCCGAAGCTTCTGAATGTCTGGGCCAGCTGG
TGCCTGCCCTGCATCGCCGAGGCCCCGCAACTGGAAGCGCTGGAGCAGATGGGCGTGGAGATCGTCGGTGTCGCCATCCG
CGACAAACCCGAAGACATCGCGCAATTCCTTGCCCGTCACGGCAATCCTTACACCGCTATCGCTCGCGACGACATCTCCG
AGGTCCAGCTCGGCATCGGCTCGAGCGGGGTGCCGGAAACCTTCGTGATCGATGGCGAGGGCGTGATCCGATACCAGCAT
ATCGGCGATATCCGGCCCGAACACATCTCGGACCTGCTGCGCGAGCTGGAGGCGGCGGGATGA

Upstream 100 bases:

>100_bases
TGGGCGGTGCGCTTGCCATTGTCGGGCACCTGCGCGTTCACTTGCGCCGCCAATCGATCGAACGGCAGATCGCGCTTCGC
CACGGGCAGGAGCTACCGGC

Downstream 100 bases:

>100_bases
TCCGTCTCCTCGCTCTCGTTCTCGCACTTCTCGCCGCGCCGCTCGCCGCGCAGCAGCGATTGCCCGATGCACCGCTGGCC
AATGTCCAGCTTGAGGACCC

Product: cytochrome c biogenesis protein

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CcmG [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNKLLIWGPLALFLFFAGVAGYQLTQPKDETVRSAMVGKPLPAFDLPAYDPAGEGDGPARITDAIFRDGRPKLLNVWASW
CLPCIAEAPQLEALEQMGVEIVGVAIRDKPEDIAQFLARHGNPYTAIARDDISEVQLGIGSSGVPETFVIDGEGVIRYQH
IGDIRPEHISDLLRELEAAG

Sequences:

>Translated_180_residues
MNKLLIWGPLALFLFFAGVAGYQLTQPKDETVRSAMVGKPLPAFDLPAYDPAGEGDGPARITDAIFRDGRPKLLNVWASW
CLPCIAEAPQLEALEQMGVEIVGVAIRDKPEDIAQFLARHGNPYTAIARDDISEVQLGIGSSGVPETFVIDGEGVIRYQH
IGDIRPEHISDLLRELEAAG
>Mature_180_residues
MNKLLIWGPLALFLFFAGVAGYQLTQPKDETVRSAMVGKPLPAFDLPAYDPAGEGDGPARITDAIFRDGRPKLLNVWASW
CLPCIAEAPQLEALEQMGVEIVGVAIRDKPEDIAQFLARHGNPYTAIARDDISEVQLGIGSSGVPETFVIDGEGVIRYQH
IGDIRPEHISDLLRELEAAG

Specific function: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=171, Percent_Identity=36.2573099415205, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 19549; Mature: 19549

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLLIWGPLALFLFFAGVAGYQLTQPKDETVRSAMVGKPLPAFDLPAYDPAGEGDGPAR
CCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
ITDAIFRDGRPKLLNVWASWCLPCIAEAPQLEALEQMGVEIVGVAIRDKPEDIAQFLARH
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHC
GNPYTAIARDDISEVQLGIGSSGVPETFVIDGEGVIRYQHIGDIRPEHISDLLRELEAAG
CCCEEEEECCCHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLLIWGPLALFLFFAGVAGYQLTQPKDETVRSAMVGKPLPAFDLPAYDPAGEGDGPAR
CCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
ITDAIFRDGRPKLLNVWASWCLPCIAEAPQLEALEQMGVEIVGVAIRDKPEDIAQFLARH
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHC
GNPYTAIARDDISEVQLGIGSSGVPETFVIDGEGVIRYQHIGDIRPEHISDLLRELEAAG
CCCEEEEECCCHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]