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The map label for this gene is yfjP [H]

Identifier: 85373171

GI number: 85373171

Start: 389051

End: 389668

Strand: Reverse

Name: yfjP [H]

Synonym: ELI_01720

Alternate gene names: 85373171

Gene position: 389668-389051 (Counterclockwise)

Preceding gene: 85373201

Following gene: 85373170

Centisome position: 12.77

GC content: 64.4

Gene sequence:

>618_bases
GTGGGTCTTACACCAGATCAGATCAAGGACGGTCTCGACGAGATTGCCAGCCGCGAGCCGCGCATCGGCGCAGTGCTGAA
GGTGGCCGGCTATCCCGAACCGCGCCTGCGCCCGACCGGCTACAAGACACTGTTGCGCACGATCGTCGGCCAGCAGGTCT
CTGTCGCCGTGGCGACTTCGATGTGGAACAAGCTGGAGGCGGAACTGGGCGAGGACTTCACCCCCGCCTGTCTGCTCGAG
CGCGACTTCGACGCCCTGCGCGCCTGCGGCCTGTCGCGCCAGAAACAGGGCTATGCGAGGAGCCTGTGCGAACTGGTCGA
AGCGGGTGCGCTCGATTTCGAGAACCTGCCAAAGGAGGATGAAGCCGCCATCGAGGAACTGACCCGGATCAAAGGCATCG
GCCGCTGGTCGGCGGAAATCTACCTGCTGTTCGCAGAAGGTCGCCCGGACATCTGGCCCGCAGGGGACTTGGCGGTCCAG
AAGGCAGTCGGCCGGATCATGGGCCACGCCGAGATGCCCAAGGAGAAAGAGGTGCGCGCTATCGCCGAAGACTGGCGCCC
GCATCGCGGGGCGGTCGCAATCTTCGCGTGGCATACCTACAATATGGAAGCGATCTGA

Upstream 100 bases:

>100_bases
TTGCTGGGCTCCTATCGATGAATTTCAAACGGCCACCTATCGGCCTTTGGCGAGCGCTGCTAAGCGGTGCGCCCGGTAAA
GGCAAGAGAGGCAAAGGGCG

Downstream 100 bases:

>100_bases
TCCGCACCGCGGATCGGCCTTCACTGTCACAACAACGGATCCTGAATGACCCCCAACATCGACGCTTTTCCGCTCATCCG
GCGCGAACATCTGTTCGGCA

Product: putative DNA-3-methyladenine glycosidase II protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MGLTPDQIKDGLDEIASREPRIGAVLKVAGYPEPRLRPTGYKTLLRTIVGQQVSVAVATSMWNKLEAELGEDFTPACLLE
RDFDALRACGLSRQKQGYARSLCELVEAGALDFENLPKEDEAAIEELTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQ
KAVGRIMGHAEMPKEKEVRAIAEDWRPHRGAVAIFAWHTYNMEAI

Sequences:

>Translated_205_residues
MGLTPDQIKDGLDEIASREPRIGAVLKVAGYPEPRLRPTGYKTLLRTIVGQQVSVAVATSMWNKLEAELGEDFTPACLLE
RDFDALRACGLSRQKQGYARSLCELVEAGALDFENLPKEDEAAIEELTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQ
KAVGRIMGHAEMPKEKEVRAIAEDWRPHRGAVAIFAWHTYNMEAI
>Mature_204_residues
GLTPDQIKDGLDEIASREPRIGAVLKVAGYPEPRLRPTGYKTLLRTIVGQQVSVAVATSMWNKLEAELGEDFTPACLLER
DFDALRACGLSRQKQGYARSLCELVEAGALDFENLPKEDEAAIEELTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQK
AVGRIMGHAEMPKEKEVRAIAEDWRPHRGAVAIFAWHTYNMEAI

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 22789; Mature: 22658

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTPDQIKDGLDEIASREPRIGAVLKVAGYPEPRLRPTGYKTLLRTIVGQQVSVAVATS
CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
MWNKLEAELGEDFTPACLLERDFDALRACGLSRQKQGYARSLCELVEAGALDFENLPKED
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHH
EAAIEELTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQKAVGRIMGHAEMPKEKEVRA
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
IAEDWRPHRGAVAIFAWHTYNMEAI
HHHHCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
GLTPDQIKDGLDEIASREPRIGAVLKVAGYPEPRLRPTGYKTLLRTIVGQQVSVAVATS
CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
MWNKLEAELGEDFTPACLLERDFDALRACGLSRQKQGYARSLCELVEAGALDFENLPKED
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHH
EAAIEELTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQKAVGRIMGHAEMPKEKEVRA
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
IAEDWRPHRGAVAIFAWHTYNMEAI
HHHHCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]