| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is ilvA [H]
Identifier: 85060371
GI number: 85060371
Start: 4101139
End: 4102683
Strand: Reverse
Name: ilvA [H]
Synonym: SG2393
Alternate gene names: 85060371
Gene position: 4102683-4101139 (Counterclockwise)
Preceding gene: 85060372
Following gene: 85060369
Centisome position: 98.36
GC content: 60.97
Gene sequence:
>1545_bases ATGGCTGAGTCTCAACCGTTTTCCGCCGAGCCCTGCCCTGCGGAGTACCTGCGCGCGGCGTTACGCGCGCAGGTGTATGA AGTGGCCCAGGTGACACCGCTGCAGGTGATGAATAAAGTGTCGGAACGCCTCGGCAATACCGTACTGGTGAAACGTGAAG ACCGTCAGCCGGTGCACAGCTTTAAACTGCGGGGCGCTTACGCGATGATTGAGGGGTTCAGCGAAGCACAGCGCGCGTGC GGCGTCATTACCGCCTCGGCGGGCAACCATGCCCAAGGGGTGGCGTTGTCCGCCAGCCAGCTCGGCATTCCGTCGCTTAT TGTCATGCCGACCAACACCGCCGATATCAAAGTGGATGCGGTGCGCGGCTTCGGCGGCGAGCCGCTGTTGTTCGGCGCCA ACTTTGATGAAGCTAAGGCCAAAGCCATTGCGCTGGCGCGCGAACGCCATATGACTTTTGTGCCGCCGTTCGATCATCCT GCGGTGATCGCCGGGCAGGGGACGCTGGCGATGGAGCTGCTTCAGCAAGACGCCCATCTGGACCGCATATTTGTGCCGGT GGGCGGCGGCGGTCTGGCGGCGGGCGTGGCGGTGTTGATAAAGCATCTGATGCCACAGATCAAAGTCATCGGCGTCGAAG CGGAAGAGTCCGCCTGTCTGGCGGCGGCGCTACACGCCGGCGAGCCGGTGGATTTACAGCGGGTCGGTCTGTTTGCTGAG GGGGTGGCGGTAAGGCGTATCGGCGATGAAACCTTCCGTCTTTGCCGCGATTACCTTGATGATGTGGTCACCGTGGACAG CGACGCGATTTGCGCGGCGGTAAAAGATTTGTTTGAGGACGTACGGGCGATTGCCGAACCCTCCGGCGCGCTGGCGCTGG CGGGGATGAAAAAATATGTCCAACAACACGGGATCCGGGATGAGCGTCTGGCGCACGTACTGTCCGGCGCTAATGTCAAT TTCCATGGCCTGCGCTATGTCTCGGAGCGCTGCGAGCTGGGCGAGCAACGCGAGGCGCTGATGGCGGTGACCATTCCGGA AAGGAAGGGCAGTTTTCTGGCCTTCTGCGAGCTCCTAGGCGGTCGGCCGGTAACGGAGTTCAATTATCGCTACAGCGATG CCGACAACGCCTGTATTTTCGTCGGCGTCAGGCTGACGCGCGGGTGCGAGGAGCGCGAGGAAATCCTGGCGGAGATGGTT GCCGGCGGCTATCAGGTGGCGGATCTATCCGACGACGAAATGGCCAAGCTGCATGTCCGCTATATGGTGGGTGGGCGACC GTCGAAACCGCTGCGCGAGCGTTTGTACAGCTTCGAGTTCCCCGAATCCCCGGGAGCATTGCTGAAATTCCTCTACACGC TGGGCACGCGCTGGAATATCACCTTATTCCACTACCGCAGTCACGGCACGGATTTCGGCCGGGTCTTGGCGGGCTTTGAA CTGGCGGAGCGTGAGCCGGAGTTCGATCATCACCTGTTGGCATTGGGCTATGAATGCCACGATGTCACCGCCAATCCGGC GTTTCGTTTGTTCCTGGCGGATTAA
Upstream 100 bases:
>100_bases ACGGCAGGTGTCGTTCGCCCTGAAAGCCTATGCCAGTTTGGCGACCAGTGCAGACAAAGGCGCGGTGCGCGATAAAGCCA AGTTGGGAGGATAAGGCACC
Downstream 100 bases:
>100_bases CCGCGCTGGCGGCCGGGGCGAGTGCATCTTCTGGCGCCGGTCAGCGTTCCAGCAGTTGCCAGAAGGCGTCGATCAGCGGT TCATGTAGCCGCTTTATTTG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MAESQPFSAEPCPAEYLRAALRAQVYEVAQVTPLQVMNKVSERLGNTVLVKREDRQPVHSFKLRGAYAMIEGFSEAQRAC GVITASAGNHAQGVALSASQLGIPSLIVMPTNTADIKVDAVRGFGGEPLLFGANFDEAKAKAIALARERHMTFVPPFDHP AVIAGQGTLAMELLQQDAHLDRIFVPVGGGGLAAGVAVLIKHLMPQIKVIGVEAEESACLAAALHAGEPVDLQRVGLFAE GVAVRRIGDETFRLCRDYLDDVVTVDSDAICAAVKDLFEDVRAIAEPSGALALAGMKKYVQQHGIRDERLAHVLSGANVN FHGLRYVSERCELGEQREALMAVTIPERKGSFLAFCELLGGRPVTEFNYRYSDADNACIFVGVRLTRGCEEREEILAEMV AGGYQVADLSDDEMAKLHVRYMVGGRPSKPLRERLYSFEFPESPGALLKFLYTLGTRWNITLFHYRSHGTDFGRVLAGFE LAEREPEFDHHLLALGYECHDVTANPAFRLFLAD
Sequences:
>Translated_514_residues MAESQPFSAEPCPAEYLRAALRAQVYEVAQVTPLQVMNKVSERLGNTVLVKREDRQPVHSFKLRGAYAMIEGFSEAQRAC GVITASAGNHAQGVALSASQLGIPSLIVMPTNTADIKVDAVRGFGGEPLLFGANFDEAKAKAIALARERHMTFVPPFDHP AVIAGQGTLAMELLQQDAHLDRIFVPVGGGGLAAGVAVLIKHLMPQIKVIGVEAEESACLAAALHAGEPVDLQRVGLFAE GVAVRRIGDETFRLCRDYLDDVVTVDSDAICAAVKDLFEDVRAIAEPSGALALAGMKKYVQQHGIRDERLAHVLSGANVN FHGLRYVSERCELGEQREALMAVTIPERKGSFLAFCELLGGRPVTEFNYRYSDADNACIFVGVRLTRGCEEREEILAEMV AGGYQVADLSDDEMAKLHVRYMVGGRPSKPLRERLYSFEFPESPGALLKFLYTLGTRWNITLFHYRSHGTDFGRVLAGFE LAEREPEFDHHLLALGYECHDVTANPAFRLFLAD >Mature_513_residues AESQPFSAEPCPAEYLRAALRAQVYEVAQVTPLQVMNKVSERLGNTVLVKREDRQPVHSFKLRGAYAMIEGFSEAQRACG VITASAGNHAQGVALSASQLGIPSLIVMPTNTADIKVDAVRGFGGEPLLFGANFDEAKAKAIALARERHMTFVPPFDHPA VIAGQGTLAMELLQQDAHLDRIFVPVGGGGLAAGVAVLIKHLMPQIKVIGVEAEESACLAAALHAGEPVDLQRVGLFAEG VAVRRIGDETFRLCRDYLDDVVTVDSDAICAAVKDLFEDVRAIAEPSGALALAGMKKYVQQHGIRDERLAHVLSGANVNF HGLRYVSERCELGEQREALMAVTIPERKGSFLAFCELLGGRPVTEFNYRYSDADNACIFVGVRLTRGCEEREEILAEMVA GGYQVADLSDDEMAKLHVRYMVGGRPSKPLRERLYSFEFPESPGALLKFLYTLGTRWNITLFHYRSHGTDFGRVLAGFEL AEREPEFDHHLLALGYECHDVTANPAFRLFLAD
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=297, Percent_Identity=31.986531986532, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI19923959, Length=309, Percent_Identity=31.0679611650485, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI33469958, Length=315, Percent_Identity=25.7142857142857, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1790207, Length=513, Percent_Identity=79.9220272904483, Blast_Score=815, Evalue=0.0, Organism=Escherichia coli, GI1789505, Length=291, Percent_Identity=36.7697594501718, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI1789235, Length=273, Percent_Identity=25.6410256410256, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71991565, Length=372, Percent_Identity=30.6451612903226, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17537387, Length=314, Percent_Identity=32.1656050955414, Blast_Score=128, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17508781, Length=286, Percent_Identity=30.7692307692308, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6320930, Length=514, Percent_Identity=48.443579766537, Blast_Score=451, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6322631, Length=318, Percent_Identity=34.2767295597484, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6319788, Length=266, Percent_Identity=27.4436090225564, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI21355833, Length=319, Percent_Identity=31.0344827586207, Blast_Score=135, Evalue=9e-32, Organism=Drosophila melanogaster, GI24645328, Length=251, Percent_Identity=29.0836653386454, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56200; Mature: 56069
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESQPFSAEPCPAEYLRAALRAQVYEVAQVTPLQVMNKVSERLGNTVLVKREDRQPVHS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCHHH FKLRGAYAMIEGFSEAQRACGVITASAGNHAQGVALSASQLGIPSLIVMPTNTADIKVDA HHHCCHHHHHHCHHHHHHHCEEEEECCCCCCCCEEEEHHHCCCCEEEEEECCCCCEEEEE VRGFGGEPLLFGANFDEAKAKAIALARERHMTFVPPFDHPAVIAGQGTLAMELLQQDAHL EECCCCCEEEEECCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCHHHHHHHHHCCCC DRIFVPVGGGGLAAGVAVLIKHLMPQIKVIGVEAEESACLAAALHAGEPVDLQRVGLFAE CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHC GVAVRRIGDETFRLCRDYLDDVVTVDSDAICAAVKDLFEDVRAIAEPSGALALAGMKKYV CCHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH QQHGIRDERLAHVLSGANVNFHGLRYVSERCELGEQREALMAVTIPERKGSFLAFCELLG HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHC GRPVTEFNYRYSDADNACIFVGVRLTRGCEEREEILAEMVAGGYQVADLSDDEMAKLHVR CCCCEECCEEECCCCCCEEEEEEEHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHEEEEE YMVGGRPSKPLRERLYSFEFPESPGALLKFLYTLGTRWNITLFHYRSHGTDFGRVLAGFE EEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCH LAEREPEFDHHLLALGYECHDVTANPAFRLFLAD HHCCCCCCCCEEEEECCEEEECCCCCEEEEEEEC >Mature Secondary Structure AESQPFSAEPCPAEYLRAALRAQVYEVAQVTPLQVMNKVSERLGNTVLVKREDRQPVHS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCHHH FKLRGAYAMIEGFSEAQRACGVITASAGNHAQGVALSASQLGIPSLIVMPTNTADIKVDA HHHCCHHHHHHCHHHHHHHCEEEEECCCCCCCCEEEEHHHCCCCEEEEEECCCCCEEEEE VRGFGGEPLLFGANFDEAKAKAIALARERHMTFVPPFDHPAVIAGQGTLAMELLQQDAHL EECCCCCEEEEECCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCHHHHHHHHHCCCC DRIFVPVGGGGLAAGVAVLIKHLMPQIKVIGVEAEESACLAAALHAGEPVDLQRVGLFAE CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHC GVAVRRIGDETFRLCRDYLDDVVTVDSDAICAAVKDLFEDVRAIAEPSGALALAGMKKYV CCHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH QQHGIRDERLAHVLSGANVNFHGLRYVSERCELGEQREALMAVTIPERKGSFLAFCELLG HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHC GRPVTEFNYRYSDADNACIFVGVRLTRGCEEREEILAEMVAGGYQVADLSDDEMAKLHVR CCCCEECCEEECCCCCCEEEEEEEHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHEEEEE YMVGGRPSKPLRERLYSFEFPESPGALLKFLYTLGTRWNITLFHYRSHGTDFGRVLAGFE EEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCH LAEREPEFDHHLLALGYECHDVTANPAFRLFLAD HHCCCCCCCCEEEEECCEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]