| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is ilvC
Identifier: 85060369
GI number: 85060369
Start: 4098536
End: 4100014
Strand: Reverse
Name: ilvC
Synonym: SG2391
Alternate gene names: 85060369
Gene position: 4100014-4098536 (Counterclockwise)
Preceding gene: 85060371
Following gene: 85060368
Centisome position: 98.29
GC content: 56.8
Gene sequence:
>1479_bases ATGGCTAACTATTTCAATACCTTAAACCTTCGTCAGCAGTTGGCGCAGTTAGGTAAATGTCGTTTCATGAGCCGGGATGA ATTCGTCGATGAAGCGGATTACTTGAAAGGCAAAAAAGTGGTGATCATTGGCTGTGGTGCCCAAGGCTTGAACCAAGGGC TGAATATGCGCGACTCCGGACTGGATATTGCCTATGCGCTGCGTAAAGAAGCCATTGCCGAGAAACGTCCCTCCTGGCGC AAGGCGACCGAAAACGGTTTCCGCGTCGGCACCTATGAAGAGCTGGTGCCGGAAGCAGGCCTGGTGGTCAACCTGACCCC GGACAAGCAACATTCCGCCGTGGTGCAGGCGGTACAGCCGCTGATGAAGCAAGGCGCCGCATTGGGCTATTCCCACGGCT TCAACATCGTTGAAGTGGGCGAGCAAATCCGTCACGACATCACCGTTATCATGGTGGCGCCGAAATGTCCGGGTACCGAG GTGCGTGAAGAGTACAAGCGCGGCTTCGGCGTGCCGACCCTTATCGCCGTGCATCCGGAAAACGATCCGAAGGGTGAGGG CATGACGCTGGCCAAAGCCTGGGCGGCCGCGACCGGCGGCCATCGCGCGGGGGTTCTGGAATCCTCTTTCGTCGCCGAGG TCAAGTCAGATCTGATGGGCGAGCAGACCATTCTGTGCGGCATGCTGCAGGCCGGCTCGCTGCTGTGCTTCGACAAAATG GTGGCCGATGGCGTCGACCCGGCCTATGCCGGAAAACTGATTCAATTTGGCTGGGAAACCACTACCGAAGCGCTGAAACA GGGCGGCATCACGCTGATGATGGACCGGCTGTCCAACAGCGCGAAATTGCGCGCTTATGCGTTGTCCGAGCAGCTCAAGC AATTGATGCAGCCGCTGTTTGAAAAACATATGGACGATATCATCACCGGTGCCTTCTCCAGCGGCATGATGGCCGATTGG GCCAACGGTGATGTTAAACTGCTCGGCTGGCGTGAAGAAACCGGCCGTTCGCCGTTCGAGAATGCACCGCAGTTCGACGG CAAAATCAGCGAGCAGACCTACTTCGACCACGGCGTATTGATGATCGCCATGGCAAAAGCCGGCGTGGAACTGGCGTTTG AAACCATGACCCGTTCCGGCATTATCGCCGAGTCGGCCTATTACGAATCGCTGCACGAATTGCCGCTCATCGCCAACACC GTCGCGCGCAAGCGTTTGTATGAAATGAATGTGGTCATTTCTGACACCGCCGAGTACGGCAACTATCTGTTCGCCAATGC CGCCGTGCCGTTGCTGAAAGAGGCGTTTATGGGCAACCTGCAGGTGGGCGATCTGGGTAAACCGGTGGCCGACGGTGAAA TCGATAATGCGCGTCTGCGTGATGTCAATGAGGCTATCCGCCAGCATCCTATTGAAATCGTGGGCGCCGAACTGCGTGGC TATATGAAGGATATGAAACGCATCGCGGTCGCGAACTGA
Upstream 100 bases:
>100_bases AAGCAATGCTTTTCCTGCTTTATAGTGGTCGGCAGAGAAGAATCCTGTCCGCGGGCGAACGCCTGCGGCAAGCCCTAATA CCTGATGATGGAGTTGCTAC
Downstream 100 bases:
>100_bases CCGGCGGGAGGGGCATCCCGACGGGTGACGCTCCGTTCAAACTTCAGCCTCCACCGTCCGGCGGGGGGGGGGGCCGCCGT GGGGATAAACCCCGGCGCCG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MANYFNTLNLRQQLAQLGKCRFMSRDEFVDEADYLKGKKVVIIGCGAQGLNQGLNMRDSGLDIAYALRKEAIAEKRPSWR KATENGFRVGTYEELVPEAGLVVNLTPDKQHSAVVQAVQPLMKQGAALGYSHGFNIVEVGEQIRHDITVIMVAPKCPGTE VREEYKRGFGVPTLIAVHPENDPKGEGMTLAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKM VADGVDPAYAGKLIQFGWETTTEALKQGGITLMMDRLSNSAKLRAYALSEQLKQLMQPLFEKHMDDIITGAFSSGMMADW ANGDVKLLGWREETGRSPFENAPQFDGKISEQTYFDHGVLMIAMAKAGVELAFETMTRSGIIAESAYYESLHELPLIANT VARKRLYEMNVVISDTAEYGNYLFANAAVPLLKEAFMGNLQVGDLGKPVADGEIDNARLRDVNEAIRQHPIEIVGAELRG YMKDMKRIAVAN
Sequences:
>Translated_492_residues MANYFNTLNLRQQLAQLGKCRFMSRDEFVDEADYLKGKKVVIIGCGAQGLNQGLNMRDSGLDIAYALRKEAIAEKRPSWR KATENGFRVGTYEELVPEAGLVVNLTPDKQHSAVVQAVQPLMKQGAALGYSHGFNIVEVGEQIRHDITVIMVAPKCPGTE VREEYKRGFGVPTLIAVHPENDPKGEGMTLAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKM VADGVDPAYAGKLIQFGWETTTEALKQGGITLMMDRLSNSAKLRAYALSEQLKQLMQPLFEKHMDDIITGAFSSGMMADW ANGDVKLLGWREETGRSPFENAPQFDGKISEQTYFDHGVLMIAMAKAGVELAFETMTRSGIIAESAYYESLHELPLIANT VARKRLYEMNVVISDTAEYGNYLFANAAVPLLKEAFMGNLQVGDLGKPVADGEIDNARLRDVNEAIRQHPIEIVGAELRG YMKDMKRIAVAN >Mature_491_residues ANYFNTLNLRQQLAQLGKCRFMSRDEFVDEADYLKGKKVVIIGCGAQGLNQGLNMRDSGLDIAYALRKEAIAEKRPSWRK ATENGFRVGTYEELVPEAGLVVNLTPDKQHSAVVQAVQPLMKQGAALGYSHGFNIVEVGEQIRHDITVIMVAPKCPGTEV REEYKRGFGVPTLIAVHPENDPKGEGMTLAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKMV ADGVDPAYAGKLIQFGWETTTEALKQGGITLMMDRLSNSAKLRAYALSEQLKQLMQPLFEKHMDDIITGAFSSGMMADWA NGDVKLLGWREETGRSPFENAPQFDGKISEQTYFDHGVLMIAMAKAGVELAFETMTRSGIIAESAYYESLHELPLIANTV ARKRLYEMNVVISDTAEYGNYLFANAAVPLLKEAFMGNLQVGDLGKPVADGEIDNARLRDVNEAIRQHPIEIVGAELRGY MKDMKRIAVAN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=491, Percent_Identity=85.132382892057, Blast_Score=854, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323387, Length=279, Percent_Identity=32.258064516129, Blast_Score=113, Evalue=6e-26,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_SODGM (Q2NQA9)
Other databases:
- EMBL: AP008232 - RefSeq: YP_456071.1 - ProteinModelPortal: Q2NQA9 - SMR: Q2NQA9 - STRING: Q2NQA9 - GeneID: 3868090 - GenomeReviews: AP008232_GR - KEGG: sgl:SG2391 - NMPDR: fig|343509.6.peg.5163 - eggNOG: COG0059 - HOGENOM: HBG297205 - OMA: EKHMDDI - PhylomeDB: Q2NQA9 - ProtClustDB: PRK05225 - BioCyc: SGLO343509:SG2391-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - PIRSF: PIRSF000116 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 54013; Mature: 53881
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: ACT_SITE 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFNTLNLRQQLAQLGKCRFMSRDEFVDEADYLKGKKVVIIGCGAQGLNQGLNMRDSG CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCEEEEEECCCHHHHCCCCCCCCC LDIAYALRKEAIAEKRPSWRKATENGFRVGTYEELVPEAGLVVNLTPDKQHSAVVQAVQP CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHH LMKQGAALGYSHGFNIVEVGEQIRHDITVIMVAPKCPGTEVREEYKRGFGVPTLIAVHPE HHHCCCCCCHHCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGEGMTLAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKM CCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH VADGVDPAYAGKLIQFGWETTTEALKQGGITLMMDRLSNSAKLRAYALSEQLKQLMQPLF HHCCCCHHHHCHHHHCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH EKHMDDIITGAFSSGMMADWANGDVKLLGWREETGRSPFENAPQFDGKISEQTYFDHGVL HHHHHHHHHHHHCCCCEEECCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHCCCCE MIAMAKAGVELAFETMTRSGIIAESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYG EEHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCHHHC NYLFANAAVPLLKEAFMGNLQVGDLGKPVADGEIDNARLRDVNEAIRQHPIEIVGAELRG CEEEEHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEHHHHHH YMKDMKRIAVAN HHHHHHHHHCCC >Mature Secondary Structure ANYFNTLNLRQQLAQLGKCRFMSRDEFVDEADYLKGKKVVIIGCGAQGLNQGLNMRDSG CCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCEEEEEECCCHHHHCCCCCCCCC LDIAYALRKEAIAEKRPSWRKATENGFRVGTYEELVPEAGLVVNLTPDKQHSAVVQAVQP CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHH LMKQGAALGYSHGFNIVEVGEQIRHDITVIMVAPKCPGTEVREEYKRGFGVPTLIAVHPE HHHCCCCCCHHCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGEGMTLAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKM CCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH VADGVDPAYAGKLIQFGWETTTEALKQGGITLMMDRLSNSAKLRAYALSEQLKQLMQPLF HHCCCCHHHHCHHHHCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH EKHMDDIITGAFSSGMMADWANGDVKLLGWREETGRSPFENAPQFDGKISEQTYFDHGVL HHHHHHHHHHHHCCCCEEECCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHCCCCE MIAMAKAGVELAFETMTRSGIIAESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYG EEHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCHHHC NYLFANAAVPLLKEAFMGNLQVGDLGKPVADGEIDNARLRDVNEAIRQHPIEIVGAELRG CEEEEHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEHHHHHH YMKDMKRIAVAN HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA