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The map label for this gene is rbn

Identifier: 85060204

GI number: 85060204

Start: 3875060

End: 3875974

Strand: Reverse

Name: rbn

Synonym: SG2226

Alternate gene names: 85060204

Gene position: 3875974-3875060 (Counterclockwise)

Preceding gene: 85060205

Following gene: 85060203

Centisome position: 92.92

GC content: 55.3

Gene sequence:

>915_bases
ATGATGGGTCTTCGGCTGCATAAGCTGCCGGTGCTGCACTTTATCCAGCACTTGGGCAAGCGGGTTTATCGTGATGATAT
TACTGTACTGGCAGGCCATCTGGCGTATGTGTCGCTACTGTCGTTGGTGCCGCTGGTGACGGTCATTTTTGCGCTGTTCG
CCGCCTTTCCGGTGTTTTCCGACGTCAGTGTCGAGCTGCGCCATTTTATTTTCACCAATTTCATGCCGGCGACCGGCGAC
GTTATCCAGCTCTATCTGGAACAATTCATTCTCAATTCGAGCCGAATGACCGCGGTGGGCACCTGTGGCCTCATCGTCAC
CGCGCTGCTTCTGATTTACTCGGTGGATACGGTGCTCAATAGTATCTGGCGCAGTAAAAATAAGCGGCCAATTATTTTCT
CTTTCGCCGTCTATTGGATGGTGTTAACCCTGGGCCCGCTGCTGGTGGGCGCCAGCATGGTGTTGAGCTCGTATCTGTTT
TCGCTTACCTGGCTGAATGTCAGCGGCGCCAAAGGTATAGTGACGCTCCTGCTGCGAATTTTTCCGCTACTGCTTTCCTG
CGCGTCGTTCTGGCTGCTTTATAGTCTGGTGCCGACGGTGCGGGTGCCGGCGCGGGATGCGCTGGTGGGCGCGTTGGTGG
CGGGAGCGTTGTTTGAACTGGGGAAAAAAGGATTCGGGCTGTATGTCACCCTGTTTCCATCCTACCAGCTGATTTACGGG
GTACTGGCGGTAATCCCCATTCTGTTTCTTTGGGTGTACTGGAGCTGGTGCATTGTATTATTGGGGGCGGAGATCACGGC
GTCGCTCAGCGAGCACCGACAGGCCGCCGCGCATCACGCCGCCCAGATTGTAAGGGATACTGATGATAGCCTTGATACAA
CGGGTCACGCAGGCCAGGGTCACCATCGACAATGA

Upstream 100 bases:

>100_bases
ATGCATGTGACGGACCGAGAGGTTGTGCCGGCATTTTTTGCCTGACGGCAGAAAAGCGTGGACGTCCTGCGCTGATGCGA
TCACCGCAAAGAGGGTGGCG

Downstream 100 bases:

>100_bases
GGTGGCGGGCGCGATAGGTCCGGGGCTCCTGATCCTGCTGGGTGTTGAGCGGCAGGACGATGAACAGAAGGCGGCCAAAT
TGTGTGAACGCGTGCTGGCT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MMGLRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFSDVSVELRHFIFTNFMPATGD
VIQLYLEQFILNSSRMTAVGTCGLIVTALLLIYSVDTVLNSIWRSKNKRPIIFSFAVYWMVLTLGPLLVGASMVLSSYLF
SLTWLNVSGAKGIVTLLLRIFPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQLIYG
VLAVIPILFLWVYWSWCIVLLGAEITASLSEHRQAAAHHAAQIVRDTDDSLDTTGHAGQGHHRQ

Sequences:

>Translated_304_residues
MMGLRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFSDVSVELRHFIFTNFMPATGD
VIQLYLEQFILNSSRMTAVGTCGLIVTALLLIYSVDTVLNSIWRSKNKRPIIFSFAVYWMVLTLGPLLVGASMVLSSYLF
SLTWLNVSGAKGIVTLLLRIFPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQLIYG
VLAVIPILFLWVYWSWCIVLLGAEITASLSEHRQAAAHHAAQIVRDTDDSLDTTGHAGQGHHRQ
>Mature_304_residues
MMGLRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFSDVSVELRHFIFTNFMPATGD
VIQLYLEQFILNSSRMTAVGTCGLIVTALLLIYSVDTVLNSIWRSKNKRPIIFSFAVYWMVLTLGPLLVGASMVLSSYLF
SLTWLNVSGAKGIVTLLLRIFPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQLIYG
VLAVIPILFLWVYWSWCIVLLGAEITASLSEHRQAAAHHAAQIVRDTDDSLDTTGHAGQGHHRQ

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=286, Percent_Identity=67.1328671328671, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 33676; Mature: 33676

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGLRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DVSVELRHFIFTNFMPATGDVIQLYLEQFILNSSRMTAVGTCGLIVTALLLIYSVDTVLN
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIWRSKNKRPIIFSFAVYWMVLTLGPLLVGASMVLSSYLFSLTWLNVSGAKGIVTLLLRI
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQLIYG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
VLAVIPILFLWVYWSWCIVLLGAEITASLSEHRQAAAHHAAQIVRDTDDSLDTTGHAGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HHRQ
CCCC
>Mature Secondary Structure
MMGLRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DVSVELRHFIFTNFMPATGDVIQLYLEQFILNSSRMTAVGTCGLIVTALLLIYSVDTVLN
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIWRSKNKRPIIFSFAVYWMVLTLGPLLVGASMVLSSYLFSLTWLNVSGAKGIVTLLLRI
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQLIYG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
VLAVIPILFLWVYWSWCIVLLGAEITASLSEHRQAAAHHAAQIVRDTDDSLDTTGHAGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HHRQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA