| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yihX [H]
Identifier: 85060205
GI number: 85060205
Start: 3876030
End: 3876617
Strand: Reverse
Name: yihX [H]
Synonym: SG2227
Alternate gene names: 85060205
Gene position: 3876617-3876030 (Counterclockwise)
Preceding gene: 85060207
Following gene: 85060204
Centisome position: 92.94
GC content: 55.27
Gene sequence:
>588_bases ATGCTATATATCTTTGATCTGGGGAATGTCGTCATTGATATCGACTTTAACCGCGTGCTAGGGGTCTGGAGCAACTTCAG CCGTGTCCCGCTGGCCATCCTGCAAAAAGAGTTTGTCATGGGTGAAGCTTTTGAACAGCATGAGCGCGGCGATATCACCG ATGAAGCTTTCGCCGCTAAAATTTGCGGCGAACTGGGCATCGCGCTGAGCTTCGAGCAATTTACCGCCGGCTGGCAGGCG GTATTCGTCGGTCTGCGGCCCGAGATGGTGGCTATTTTGACCCGGCTGCGCGAACAGGGCCATCGGGTGGTGATCCTCTC CAATACCAATCGTTTGCATTGCGATTATTGGCCGAGCCAGTATCCCGAAGTGCAAGCCTGTGTCGATAAACTCTATTTGT CGCAGGATCTGGGCATGCGTAAGCCGGATCCGGCCATTTATCGCTACGTGCTGGCGCAGGAAGGGGCGACGGCCGACGGG GCGGTTTTCTTTGATGATAATGCCGATAATATTGCCGCGGCGCGTGAGGTGGGTATCCGCAGCATGCATGTGACGGACCG AGAGGTTGTGCCGGCATTTTTTGCCTGA
Upstream 100 bases:
>100_bases GGTGGGGCCTCTTTTTTCCCTCCGGGAAGCCGCTCGCACTGTTCAGTCAGGCCGTTTCTCGCTACAGTGAAGATCTTACG AAGGATTCCGGAGGGGGACC
Downstream 100 bases:
>100_bases CGGCAGAAAAGCGTGGACGTCCTGCGCTGATGCGATCACCGCAAAGAGGGTGGCGATGATGGGTCTTCGGCTGCATAAGC TGCCGGTGCTGCACTTTATC
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLYIFDLGNVVIDIDFNRVLGVWSNFSRVPLAILQKEFVMGEAFEQHERGDITDEAFAAKICGELGIALSFEQFTAGWQA VFVGLRPEMVAILTRLREQGHRVVILSNTNRLHCDYWPSQYPEVQACVDKLYLSQDLGMRKPDPAIYRYVLAQEGATADG AVFFDDNADNIAAAREVGIRSMHVTDREVVPAFFA
Sequences:
>Translated_195_residues MLYIFDLGNVVIDIDFNRVLGVWSNFSRVPLAILQKEFVMGEAFEQHERGDITDEAFAAKICGELGIALSFEQFTAGWQA VFVGLRPEMVAILTRLREQGHRVVILSNTNRLHCDYWPSQYPEVQACVDKLYLSQDLGMRKPDPAIYRYVLAQEGATADG AVFFDDNADNIAAAREVGIRSMHVTDREVVPAFFA >Mature_195_residues MLYIFDLGNVVIDIDFNRVLGVWSNFSRVPLAILQKEFVMGEAFEQHERGDITDEAFAAKICGELGIALSFEQFTAGWQA VFVGLRPEMVAILTRLREQGHRVVILSNTNRLHCDYWPSQYPEVQACVDKLYLSQDLGMRKPDPAIYRYVLAQEGATADG AVFFDDNADNIAAAREVGIRSMHVTDREVVPAFFA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=195, Percent_Identity=63.0769230769231, Blast_Score=279, Evalue=1e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 21950; Mature: 21950
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIFDLGNVVIDIDFNRVLGVWSNFSRVPLAILQKEFVMGEAFEQHERGDITDEAFAAK CEEEEEECCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ICGELGIALSFEQFTAGWQAVFVGLRPEMVAILTRLREQGHRVVILSNTNRLHCDYWPSQ HHHHHCCEEEHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCC YPEVQACVDKLYLSQDLGMRKPDPAIYRYVLAQEGATADGAVFFDDNADNIAAAREVGIR CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCE SMHVTDREVVPAFFA EEECCCHHHCCHHCC >Mature Secondary Structure MLYIFDLGNVVIDIDFNRVLGVWSNFSRVPLAILQKEFVMGEAFEQHERGDITDEAFAAK CEEEEEECCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ICGELGIALSFEQFTAGWQAVFVGLRPEMVAILTRLREQGHRVVILSNTNRLHCDYWPSQ HHHHHCCEEEHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCC YPEVQACVDKLYLSQDLGMRKPDPAIYRYVLAQEGATADGAVFFDDNADNIAAAREVGIR CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCE SMHVTDREVVPAFFA EEECCCHHHCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]