| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is cat [H]
Identifier: 85060079
GI number: 85060079
Start: 3629358
End: 3630827
Strand: Reverse
Name: cat [H]
Synonym: SG2101
Alternate gene names: 85060079
Gene position: 3630827-3629358 (Counterclockwise)
Preceding gene: 85060082
Following gene: 85060075
Centisome position: 87.05
GC content: 55.99
Gene sequence:
>1470_bases ATGAAAGATAAAACGCTGTTAACTACCGCCAGCGGTATCCCGGTGGCCGATAATCAGAACTCCCGATCCGCCGGAGCGCG GGGGCCATTGATGCTGGACGATTTTCATCTGGTGGAAAAACTGGCCCATTTTAACCGCGAAGTGATTCCCGAGCGGCGCG TGCATGCCAAAGGGTCCGGCGCCTATGGGACGTTTCGCGTGACTCAGGACATCCGCCGGCTGACTACCGCGTCGCCCTTT GAGCACATCGGCAAAGAGACGCCGGTATTACTGCGTTTTTCAACCGTGGGTGGCGAGCGTGGCTCGGCGGACACCGAGCG GGATCCACGCGGTTTTGCGCTGAAATTTTATACCGAACAGGGTAACTGGGATGTGGTGGGTAATAACACACCGGTCTTTT TTATCCGCGATCCGCTGAAATTTCCTGATTTTATCCATACCCAAAAACGGGATCCGGCGACGAATCTGAAATCCCCCCAG ATGATGTGGGACTTCTGGTCTTTATCGCCGGAGTCGATGCATCAAGTCACCATTTTGTTTTCCGATCGCGGTATTCCCGA TGGTTACCGTTTTATGCACGGTTTTGGCAGCCATACCTATAGCCTGATCAATGCTGACGGCGAGCGAGTGTTTATTAAAT GGCATTTTAAAACGCTTCAGGGCATCAAAAACCTGACGGTGGAAGAGGCCGGCCGTCTGGCGGGCAGCGATCCGGATTAT GCACAGCGCGATCTGTTCAGCGCTATCGAGCGGGGCGATTGTCCGCGCTGGCGGGTTTGCATCCAGCTCATGACCGAGCA GGAAGCCGCACAGCGTCAGGAAAATCCGTTCGATGTCACCAAAGTTTGGTCGCAGAAAACCCATCCGTTGCAGGAGGTGG GTATCCTGGAACTTAATCGTAACCCGGACAACTATTTCGCGGAGGTCGAACAGGCGGCGTTCGCGCCTAGCAATGTGGTA CCCGGCATCGGCCTGTCGCCGGATAAGATGCTGCAGGGACGGGTATTCGCCTATGCCGACGCCCAACGTTACCGCATCGG TACCAATTACCAGCAGCTACCGGTTAACGCGCCGCACTGCCCCTATCACAATTATCAGCGTGACGGCGCCATGCGTTTTG ACGCTAACGGCGGCGGAACGCCTAATTACGAGCCGAATAGGTATGCTACCTCGCAGCAGCAGGCACCAGGGTTTAGGGAG CCACCGCTGAATTTCAGCGGCGCGGCGGATCGTTATGACCATCGCGTGGATGAAGATTATTACAGCCAGGCTGGTGATCT TTATCGATTGATGGACTCACAGCAGAAAACGCTGCTGACGGCCAATCTGGTCAGGGCCCTGGCGCCGGTAACCCGGGACG TCCAACTGCGACAAATTGCGCATTTCCTGCGGGCGGATGTTGATTACGGCCGCGCGGTGGCGCAAGGGCTGGGAATTGAA GACGAGATACTGACCTCGGTCGGCGTTTAA
Upstream 100 bases:
>100_bases TCAGCTATTGAGTTGATAGATGCAATGAATTAGCCACCTTAGCCGCTGCGCTATAAAGTGGGCTCAGAGTTCCCTTTCCT TTACCGTGAGCCTGAATATT
Downstream 100 bases:
>100_bases AGGATCTCGGCGCCGTGGGGCTGATGTCTTACAGGTTAGGCGTTGGCGCCGGCGCGCCCTTCAGGCTTAGGGCGATTGGC CCGTGCACGCGCTTTCAGGG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MKDKTLLTTASGIPVADNQNSRSAGARGPLMLDDFHLVEKLAHFNREVIPERRVHAKGSGAYGTFRVTQDIRRLTTASPF EHIGKETPVLLRFSTVGGERGSADTERDPRGFALKFYTEQGNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPATNLKSPQ MMWDFWSLSPESMHQVTILFSDRGIPDGYRFMHGFGSHTYSLINADGERVFIKWHFKTLQGIKNLTVEEAGRLAGSDPDY AQRDLFSAIERGDCPRWRVCIQLMTEQEAAQRQENPFDVTKVWSQKTHPLQEVGILELNRNPDNYFAEVEQAAFAPSNVV PGIGLSPDKMLQGRVFAYADAQRYRIGTNYQQLPVNAPHCPYHNYQRDGAMRFDANGGGTPNYEPNRYATSQQQAPGFRE PPLNFSGAADRYDHRVDEDYYSQAGDLYRLMDSQQKTLLTANLVRALAPVTRDVQLRQIAHFLRADVDYGRAVAQGLGIE DEILTSVGV
Sequences:
>Translated_489_residues MKDKTLLTTASGIPVADNQNSRSAGARGPLMLDDFHLVEKLAHFNREVIPERRVHAKGSGAYGTFRVTQDIRRLTTASPF EHIGKETPVLLRFSTVGGERGSADTERDPRGFALKFYTEQGNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPATNLKSPQ MMWDFWSLSPESMHQVTILFSDRGIPDGYRFMHGFGSHTYSLINADGERVFIKWHFKTLQGIKNLTVEEAGRLAGSDPDY AQRDLFSAIERGDCPRWRVCIQLMTEQEAAQRQENPFDVTKVWSQKTHPLQEVGILELNRNPDNYFAEVEQAAFAPSNVV PGIGLSPDKMLQGRVFAYADAQRYRIGTNYQQLPVNAPHCPYHNYQRDGAMRFDANGGGTPNYEPNRYATSQQQAPGFRE PPLNFSGAADRYDHRVDEDYYSQAGDLYRLMDSQQKTLLTANLVRALAPVTRDVQLRQIAHFLRADVDYGRAVAQGLGIE DEILTSVGV >Mature_489_residues MKDKTLLTTASGIPVADNQNSRSAGARGPLMLDDFHLVEKLAHFNREVIPERRVHAKGSGAYGTFRVTQDIRRLTTASPF EHIGKETPVLLRFSTVGGERGSADTERDPRGFALKFYTEQGNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPATNLKSPQ MMWDFWSLSPESMHQVTILFSDRGIPDGYRFMHGFGSHTYSLINADGERVFIKWHFKTLQGIKNLTVEEAGRLAGSDPDY AQRDLFSAIERGDCPRWRVCIQLMTEQEAAQRQENPFDVTKVWSQKTHPLQEVGILELNRNPDNYFAEVEQAAFAPSNVV PGIGLSPDKMLQGRVFAYADAQRYRIGTNYQQLPVNAPHCPYHNYQRDGAMRFDANGGGTPNYEPNRYATSQQQAPGFRE PPLNFSGAADRYDHRVDEDYYSQAGDLYRLMDSQQKTLLTANLVRALAPVTRDVQLRQIAHFLRADVDYGRAVAQGLGIE DEILTSVGV
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=472, Percent_Identity=54.6610169491525, Blast_Score=529, Evalue=1e-150, Organism=Escherichia coli, GI48994891, Length=495, Percent_Identity=43.8383838383838, Blast_Score=392, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71998444, Length=472, Percent_Identity=52.5423728813559, Blast_Score=517, Evalue=1e-147, Organism=Caenorhabditis elegans, GI25151141, Length=476, Percent_Identity=50, Blast_Score=492, Evalue=1e-139, Organism=Caenorhabditis elegans, GI25147792, Length=476, Percent_Identity=49.5798319327731, Blast_Score=490, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6320462, Length=487, Percent_Identity=48.2546201232033, Blast_Score=434, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6321525, Length=536, Percent_Identity=38.2462686567164, Blast_Score=361, Evalue=1e-100, Organism=Drosophila melanogaster, GI17981717, Length=480, Percent_Identity=51.875, Blast_Score=507, Evalue=1e-144, Organism=Drosophila melanogaster, GI19920968, Length=478, Percent_Identity=47.907949790795, Blast_Score=465, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 55221; Mature: 55221
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKTLLTTASGIPVADNQNSRSAGARGPLMLDDFHLVEKLAHFNREVIPERRVHAKGSG CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHCCCHHCCCCCCC AYGTFRVTQDIRRLTTASPFEHIGKETPVLLRFSTVGGERGSADTERDPRGFALKFYTEQ CCEEEHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEC GNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPATNLKSPQMMWDFWSLSPESMHQVTILF CCEEEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEE SDRGIPDGYRFMHGFGSHTYSLINADGERVFIKWHFKTLQGIKNLTVEEAGRLAGSDPDY ECCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHCCHHHHHCCCCCCCCH AQRDLFSAIERGDCPRWRVCIQLMTEQEAAQRQENPFDVTKVWSQKTHPLQEVGILELNR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHCCEEEECC NPDNYFAEVEQAAFAPSNVVPGIGLSPDKMLQGRVFAYADAQRYRIGTNYQQLPVNAPHC CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCHHEEECCCCCCCCCCCCCC PYHNYQRDGAMRFDANGGGTPNYEPNRYATSQQQAPGFREPPLNFSGAADRYDHRVDEDY CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCHHH YSQAGDLYRLMDSQQKTLLTANLVRALAPVTRDVQLRQIAHFLRADVDYGRAVAQGLGIE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCC DEILTSVGV HHHHHHCCC >Mature Secondary Structure MKDKTLLTTASGIPVADNQNSRSAGARGPLMLDDFHLVEKLAHFNREVIPERRVHAKGSG CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHCCCHHCCCCCCC AYGTFRVTQDIRRLTTASPFEHIGKETPVLLRFSTVGGERGSADTERDPRGFALKFYTEQ CCEEEHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEC GNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPATNLKSPQMMWDFWSLSPESMHQVTILF CCEEEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEE SDRGIPDGYRFMHGFGSHTYSLINADGERVFIKWHFKTLQGIKNLTVEEAGRLAGSDPDY ECCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHCCHHHHHCCCCCCCCH AQRDLFSAIERGDCPRWRVCIQLMTEQEAAQRQENPFDVTKVWSQKTHPLQEVGILELNR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHCCEEEECC NPDNYFAEVEQAAFAPSNVVPGIGLSPDKMLQGRVFAYADAQRYRIGTNYQQLPVNAPHC CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCHHEEECCCCCCCCCCCCCC PYHNYQRDGAMRFDANGGGTPNYEPNRYATSQQQAPGFREPPLNFSGAADRYDHRVDEDY CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCHHH YSQAGDLYRLMDSQQKTLLTANLVRALAPVTRDVQLRQIAHFLRADVDYGRAVAQGLGIE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCC DEILTSVGV HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA