| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is ydgE [H]
Identifier: 85060075
GI number: 85060075
Start: 3615873
End: 3616382
Strand: Reverse
Name: ydgE [H]
Synonym: SG2097
Alternate gene names: 85060075
Gene position: 3616382-3615873 (Counterclockwise)
Preceding gene: 85060079
Following gene: 85060072
Centisome position: 86.7
GC content: 58.24
Gene sequence:
>510_bases ATGGGGACACCCCCGGCGTTTATGATTAAGCACAACGGAAAGCAGATGATTACATTACGAAAAATGACCACGGCGGAGTT TGACCTCTACCTGCCCGGCGCGATTGAAGACTATGCACGCGATCTCAGCGACAATCACGGCTATTCATTGGCCGTTGGCC GCGATAACGCCGCGCGCATTATGCATGATTATCTTCCTGAGGGACCTGATACCGCCGACCACCGGCTGGGGTGCATCGTC TGTGACGACGAACGGGTGGGCTACCTTTGGGTCAGCCTGCGTAACCTGCCAGAGGCTTATATCTGCGATTTCAGTATCCT GCCGCAGTGGCGCCGCCGGGGTTACGGCCGTGCCGCATTGACAGCGCTGGATAGCAAGCTTATGGCCGCGGGATGTAAGG AGGTGGCGCTGCGGGTGTCGGCCAATAATCCTCACGCCCGCGCGCTGTATGAAAGTCATGCCTTCCACCTCACCGGCTAC ACCATGGCCCGACAACTGGTGCGGAACTGA
Upstream 100 bases:
>100_bases GGCGCCAGGATCACAGCCTGTGGGGCAGACGGGCAGCGGTGCGTATCAAAGAAGGGTCGGACGTGATGAGATGACGCATT AGCAGTATCATTGCTCGAGG
Downstream 100 bases:
>100_bases GAGGCAGGCGCGTGACGGTCGCTTGCGCCACCGGGCGGTAGGATAGTGCACACAGGGGCCTGTCGTCGCCGGGCAGCGTT ACTCCCCGACGGCGCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGTPPAFMIKHNGKQMITLRKMTTAEFDLYLPGAIEDYARDLSDNHGYSLAVGRDNAARIMHDYLPEGPDTADHRLGCIV CDDERVGYLWVSLRNLPEAYICDFSILPQWRRRGYGRAALTALDSKLMAAGCKEVALRVSANNPHARALYESHAFHLTGY TMARQLVRN
Sequences:
>Translated_169_residues MGTPPAFMIKHNGKQMITLRKMTTAEFDLYLPGAIEDYARDLSDNHGYSLAVGRDNAARIMHDYLPEGPDTADHRLGCIV CDDERVGYLWVSLRNLPEAYICDFSILPQWRRRGYGRAALTALDSKLMAAGCKEVALRVSANNPHARALYESHAFHLTGY TMARQLVRN >Mature_168_residues GTPPAFMIKHNGKQMITLRKMTTAEFDLYLPGAIEDYARDLSDNHGYSLAVGRDNAARIMHDYLPEGPDTADHRLGCIVC DDERVGYLWVSLRNLPEAYICDFSILPQWRRRGYGRAALTALDSKLMAAGCKEVALRVSANNPHARALYESHAFHLTGYT MARQLVRN
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 19015; Mature: 18884
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPPAFMIKHNGKQMITLRKMTTAEFDLYLPGAIEDYARDLSDNHGYSLAVGRDNAARI CCCCCEEEEEECCCEEEEEEECCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCHHHH MHDYLPEGPDTADHRLGCIVCDDERVGYLWVSLRNLPEAYICDFSILPQWRRRGYGRAAL HHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCHHHHHCCCCHHHH TALDSKLMAAGCKEVALRVSANNPHARALYESHAFHLTGYTMARQLVRN HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEHHHHHHHHHCC >Mature Secondary Structure GTPPAFMIKHNGKQMITLRKMTTAEFDLYLPGAIEDYARDLSDNHGYSLAVGRDNAARI CCCCEEEEEECCCEEEEEEECCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCHHHH MHDYLPEGPDTADHRLGCIVCDDERVGYLWVSLRNLPEAYICDFSILPQWRRRGYGRAAL HHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCHHHHHCCCCHHHH TALDSKLMAAGCKEVALRVSANNPHARALYESHAFHLTGYTMARQLVRN HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]