| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060026
Identifier: 85060026
GI number: 85060026
Start: 3526176
End: 3526958
Strand: Reverse
Name: 85060026
Synonym: SG2048
Alternate gene names: NA
Gene position: 3526958-3526176 (Counterclockwise)
Preceding gene: 85060027
Following gene: 85060025
Centisome position: 84.56
GC content: 47.25
Gene sequence:
>783_bases TTGCAAGGGGCGCAGTGCGAGAAGACCAACTTCAAGGGCGCTAACTTGCAGGGGGCGTGGTGTCAGGAGGCTAAATTCAA CGGTGCCGATTTGCAGGGAGCATTGTGCCATAATACGTATCTGGCGGGCGCCGATTTGCGGGACATCGCCAAGACGGATA GCGTTTTACAACAATACATAGAGAAGACAGACAAAAAGCGGACAGAGGATATTCGTGCACTGTGCGATAAAATCGTAAAG GCATATGAAAAAGACAACAATGGAAAAGTCGAACATAACAACGATGGGGTGTTTAGAAAAGAGCCTGCGGTGCCCGAGTT GAATGATGCCACTGCTTCTCTCAATAGGGGGGAATTAGATATAGAAAAGGTGGGTATCCATGTGGCATCCACACTAATTA AAAGAGAATTTAAGGCTGAAAAACCACTGGATAAGGAAACCTTTGCGCGAATCGGGGCTCATCCCGAACAAGCGTTGCAA CTGTTTCTCGATAGATTTGCTGCAATGACACCGGAAACGGGGAAACGGTGCCATATGATATTGGCCACATTTGCTGCGGC ATACGATAATGCAGATAATGATAATGCTAGTGAATCTAACAAAGGCACGGTATTGAGCTGCGCAGCAGATACATCATTAT TCAATGGTTTTTTTGCCCTTGCCGCCGGCAATCGTACAACGACTTACGACTACAGCGAGAGGATCCTGAGGGACTTTATC TTGTATCAAAAAGTCCCCCCTCCGCCATCGTATCGACGCTGTCGCATCAATGCAATTAGCTGA
Upstream 100 bases:
>100_bases AAATGCTAATCTTACCGGCCTTTCCTTATCTGGAATCGATTTAAGCCACACTATTCTCGATCATGCCAATTTCACCGACG CCGACCTCTCGGGCGCCGAA
Downstream 100 bases:
>100_bases AACCATGCAATCTGCTAAACCCATACAATTCGCTGAGCCTGTTCAGTCTACTGCCTCCAGAGAACTTGCCGGGCCAATTT CTCCCCTTGTGAACAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MQGAQCEKTNFKGANLQGAWCQEAKFNGADLQGALCHNTYLAGADLRDIAKTDSVLQQYIEKTDKKRTEDIRALCDKIVK AYEKDNNGKVEHNNDGVFRKEPAVPELNDATASLNRGELDIEKVGIHVASTLIKREFKAEKPLDKETFARIGAHPEQALQ LFLDRFAAMTPETGKRCHMILATFAAAYDNADNDNASESNKGTVLSCAADTSLFNGFFALAAGNRTTTYDYSERILRDFI LYQKVPPPPSYRRCRINAIS
Sequences:
>Translated_260_residues MQGAQCEKTNFKGANLQGAWCQEAKFNGADLQGALCHNTYLAGADLRDIAKTDSVLQQYIEKTDKKRTEDIRALCDKIVK AYEKDNNGKVEHNNDGVFRKEPAVPELNDATASLNRGELDIEKVGIHVASTLIKREFKAEKPLDKETFARIGAHPEQALQ LFLDRFAAMTPETGKRCHMILATFAAAYDNADNDNASESNKGTVLSCAADTSLFNGFFALAAGNRTTTYDYSERILRDFI LYQKVPPPPSYRRCRINAIS >Mature_260_residues MQGAQCEKTNFKGANLQGAWCQEAKFNGADLQGALCHNTYLAGADLRDIAKTDSVLQQYIEKTDKKRTEDIRALCDKIVK AYEKDNNGKVEHNNDGVFRKEPAVPELNDATASLNRGELDIEKVGIHVASTLIKREFKAEKPLDKETFARIGAHPEQALQ LFLDRFAAMTPETGKRCHMILATFAAAYDNADNDNASESNKGTVLSCAADTSLFNGFFALAAGNRTTTYDYSERILRDFI LYQKVPPPPSYRRCRINAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28890; Mature: 28890
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGAQCEKTNFKGANLQGAWCQEAKFNGADLQGALCHNTYLAGADLRDIAKTDSVLQQYI CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCEECCCCHHHHHHHHHHHHHHH EKTDKKRTEDIRALCDKIVKAYEKDNNGKVEHNNDGVFRKEPAVPELNDATASLNRGELD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCHHHCCCCCCCH IEKVGIHVASTLIKREFKAEKPLDKETFARIGAHPEQALQLFLDRFAAMTPETGKRCHMI HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LATFAAAYDNADNDNASESNKGTVLSCAADTSLFNGFFALAAGNRTTTYDYSERILRDFI HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHH LYQKVPPPPSYRRCRINAIS HHHCCCCCCCCCEEEEEECC >Mature Secondary Structure MQGAQCEKTNFKGANLQGAWCQEAKFNGADLQGALCHNTYLAGADLRDIAKTDSVLQQYI CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCEECCCCHHHHHHHHHHHHHHH EKTDKKRTEDIRALCDKIVKAYEKDNNGKVEHNNDGVFRKEPAVPELNDATASLNRGELD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCHHHCCCCCCCH IEKVGIHVASTLIKREFKAEKPLDKETFARIGAHPEQALQLFLDRFAAMTPETGKRCHMI HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LATFAAAYDNADNDNASESNKGTVLSCAADTSLFNGFFALAAGNRTTTYDYSERILRDFI HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHH LYQKVPPPPSYRRCRINAIS HHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA