Click here to switch to the map view.

The map label for this gene is ohrR [H]

Identifier: 85060025

GI number: 85060025

Start: 3523995

End: 3524432

Strand: Reverse

Name: ohrR [H]

Synonym: SG2047

Alternate gene names: 85060025

Gene position: 3524432-3523995 (Counterclockwise)

Preceding gene: 85060026

Following gene: 85060023

Centisome position: 84.5

GC content: 50.68

Gene sequence:

>438_bases
ATGCTGGATCGTCCACGCTTTGGCGAGCAGCTCTGTTATTCGATTTATTCCGCTTCGCTTGTCATTAAGCGCCTGTATAA
ACCCTTATTGGATGAAATGGGTGTTACCTATCCGCAATATTTGGTGCTGAATGTCCTTTGGGAACAGGACAAACAGACGA
TAGGCCATATCGGCGACACGCTGTCTTTGGAAATCAGCACGCTGACGCCGCTGCTCAAGCGCCTGGAGAGCGAAGGATTT
ATCCGGCGCGAACGGAGTCCTGGGGACGAGAGGAAAGTGTTCATCAGCCTGTTGGAGAAGGGAAAAGCGCTGGAAGCACA
ATCGCTGTGCCTGTCTAATACGCTGCTTTGCAGCTCCGGGCTGGCATTGACGACTCTGCAACGGCTTAATCAAGAGATCA
TTGCCCTGCGCACAAATATCGTCAAAGGTATAAGTTAA

Upstream 100 bases:

>100_bases
GCCATAGTTTTATTTTTCAAGCGATTTATTATCGCGATATCTATTATCCCACGTTTATGCTACGATTAGGTGCAAAAGCA
CAGAAACAGGAGAGAGTCTC

Downstream 100 bases:

>100_bases
GCCCTCACTCCGTGCTGAGCTAAGGTGGCTATCAGGGTAGATTGCCCTGACCGGCACCTATTGGCGATACGTTTGGCTGA
GCGCTTCTGCCAATGCACGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLDRPRFGEQLCYSIYSASLVIKRLYKPLLDEMGVTYPQYLVLNVLWEQDKQTIGHIGDTLSLEISTLTPLLKRLESEGF
IRRERSPGDERKVFISLLEKGKALEAQSLCLSNTLLCSSGLALTTLQRLNQEIIALRTNIVKGIS

Sequences:

>Translated_145_residues
MLDRPRFGEQLCYSIYSASLVIKRLYKPLLDEMGVTYPQYLVLNVLWEQDKQTIGHIGDTLSLEISTLTPLLKRLESEGF
IRRERSPGDERKVFISLLEKGKALEAQSLCLSNTLLCSSGLALTTLQRLNQEIIALRTNIVKGIS
>Mature_145_residues
MLDRPRFGEQLCYSIYSASLVIKRLYKPLLDEMGVTYPQYLVLNVLWEQDKQTIGHIGDTLSLEISTLTPLLKRLESEGF
IRRERSPGDERKVFISLLEKGKALEAQSLCLSNTLLCSSGLALTTLQRLNQEIIALRTNIVKGIS

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16398; Mature: 16398

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRPRFGEQLCYSIYSASLVIKRLYKPLLDEMGVTYPQYLVLNVLWEQDKQTIGHIGDT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
LSLEISTLTPLLKRLESEGFIRRERSPGDERKVFISLLEKGKALEAQSLCLSNTLLCSSG
CEEHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
LALTTLQRLNQEIIALRTNIVKGIS
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDRPRFGEQLCYSIYSASLVIKRLYKPLLDEMGVTYPQYLVLNVLWEQDKQTIGHIGDT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
LSLEISTLTPLLKRLESEGFIRRERSPGDERKVFISLLEKGKALEAQSLCLSNTLLCSSG
CEEHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
LALTTLQRLNQEIIALRTNIVKGIS
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]