| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060027
Identifier: 85060027
GI number: 85060027
Start: 3534915
End: 3535721
Strand: Reverse
Name: 85060027
Synonym: SG2049
Alternate gene names: NA
Gene position: 3535721-3534915 (Counterclockwise)
Preceding gene: 85060028
Following gene: 85060026
Centisome position: 84.77
GC content: 40.02
Gene sequence:
>807_bases GTGATAAATACGCTATTGTCACTCGAAATAAGAGTCGGTAATTTAATGGATGAAGGATTTCCTTCAGTGCAGAAAGGAAA AAGTGAAAATGAAATGAGTTGCCGATATTCAATCATAATGCATAATTTGAAAAATGAATTAAAAGAAATCATTAACGAAT ATCGTGACGTGGGTAATGAGTTTACAGCGGATGCAGGCACGCCAGCTCACTATGTATCCTCATCGGGTTCAGTGATGGAA GTGCTGCTACAAAAGCTGGACGGTAGACGATTGGCTGAGTGTCCTGCTATCGCGGCGGACGGCAGTAATCTGAAGGAGGT GAAAACAGCACTCACTGCATCCGCGCAAGCGACGTATGAAGTAGTTGATCAGGTGAAAGGCCTGGTACGTAAGGAGAGAC TTAATCGTGAGGTTAAATTAACCCAATTACAAAGAAATATCGATCAGGTTGCGGCCAAGCCTGAGTTACGTCAATTTTCC TGCGAGGGTATACAGGATGAAAAACAATGGTCGAGGTATTCCGAATTCTGGGAAGGCATAGCCTGCGATATCAAATCGAT TAAAAATAAAAAAGAGTACGTTGATTTTTATTCTGAGTTAACTTTAAAATATACTTATTTTTACCAAAAATTCATAGAAT TACAAGCCACGGTGGCTAAATTAGTGAAGGAAGGAGAGGATGGTAACCACGTGAAATGGGATGCCAAAAACTTCCAGGAA AAGTTCAATGAGTTCAAGGATTATGCAAAAGTGACTGTGGTTTATGATATGCCAGAGTCGGCTGAGTTAAAAAAATATAC GATATGA
Upstream 100 bases:
>100_bases CATCTTGCAATCTCATTAACTATTGGATATATTTCTCCTGACGTAAATGGCAAAAATATACGACTGGTTAATTATTTATT TGATTAATAATGGATAAGTC
Downstream 100 bases:
>100_bases AAAATGGCAAGGATAAACAAAAGGCCATCAGTGACCTTGAGAAATCACTAGGTTTGAAACCTACATTTAAACTTGAATTG ATAAAAGATAATTCTGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MINTLLSLEIRVGNLMDEGFPSVQKGKSENEMSCRYSIIMHNLKNELKEIINEYRDVGNEFTADAGTPAHYVSSSGSVME VLLQKLDGRRLAECPAIAADGSNLKEVKTALTASAQATYEVVDQVKGLVRKERLNREVKLTQLQRNIDQVAAKPELRQFS CEGIQDEKQWSRYSEFWEGIACDIKSIKNKKEYVDFYSELTLKYTYFYQKFIELQATVAKLVKEGEDGNHVKWDAKNFQE KFNEFKDYAKVTVVYDMPESAELKKYTI
Sequences:
>Translated_268_residues MINTLLSLEIRVGNLMDEGFPSVQKGKSENEMSCRYSIIMHNLKNELKEIINEYRDVGNEFTADAGTPAHYVSSSGSVME VLLQKLDGRRLAECPAIAADGSNLKEVKTALTASAQATYEVVDQVKGLVRKERLNREVKLTQLQRNIDQVAAKPELRQFS CEGIQDEKQWSRYSEFWEGIACDIKSIKNKKEYVDFYSELTLKYTYFYQKFIELQATVAKLVKEGEDGNHVKWDAKNFQE KFNEFKDYAKVTVVYDMPESAELKKYTI >Mature_268_residues MINTLLSLEIRVGNLMDEGFPSVQKGKSENEMSCRYSIIMHNLKNELKEIINEYRDVGNEFTADAGTPAHYVSSSGSVME VLLQKLDGRRLAECPAIAADGSNLKEVKTALTASAQATYEVVDQVKGLVRKERLNREVKLTQLQRNIDQVAAKPELRQFS CEGIQDEKQWSRYSEFWEGIACDIKSIKNKKEYVDFYSELTLKYTYFYQKFIELQATVAKLVKEGEDGNHVKWDAKNFQE KFNEFKDYAKVTVVYDMPESAELKKYTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30777; Mature: 30777
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINTLLSLEIRVGNLMDEGFPSVQKGKSENEMSCRYSIIMHNLKNELKEIINEYRDVGNE CCCCEEEEEEEECHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FTADAGTPAHYVSSSGSVMEVLLQKLDGRRLAECPAIAADGSNLKEVKTALTASAQATYE CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH VVDQVKGLVRKERLNREVKLTQLQRNIDQVAAKPELRQFSCEGIQDEKQWSRYSEFWEGI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH ACDIKSIKNKKEYVDFYSELTLKYTYFYQKFIELQATVAKLVKEGEDGNHVKWDAKNFQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH KFNEFKDYAKVTVVYDMPESAELKKYTI HHHHHHHHHEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MINTLLSLEIRVGNLMDEGFPSVQKGKSENEMSCRYSIIMHNLKNELKEIINEYRDVGNE CCCCEEEEEEEECHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FTADAGTPAHYVSSSGSVMEVLLQKLDGRRLAECPAIAADGSNLKEVKTALTASAQATYE CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH VVDQVKGLVRKERLNREVKLTQLQRNIDQVAAKPELRQFSCEGIQDEKQWSRYSEFWEGI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH ACDIKSIKNKKEYVDFYSELTLKYTYFYQKFIELQATVAKLVKEGEDGNHVKWDAKNFQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH KFNEFKDYAKVTVVYDMPESAELKKYTI HHHHHHHHHEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA