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The map label for this gene is visC [H]

Identifier: 85059981

GI number: 85059981

Start: 3459607

End: 3460824

Strand: Reverse

Name: visC [H]

Synonym: SG2003

Alternate gene names: 85059981

Gene position: 3460824-3459607 (Counterclockwise)

Preceding gene: 85059982

Following gene: 85059980

Centisome position: 82.97

GC content: 62.56

Gene sequence:

>1218_bases
ATGCAAGCATTCGATATAGTCATTAACGGCGGCGGCATGGTCGGTCTGGCGCTGGCCTGCGGCCTGCAGGGGAGCGGACT
GCGCGTGGCGGTCATTGAGCGTCAGGCGCCGGAGGCGATCCCTCCCGCCGATTGGCCGGCACTACGGGTTTCTGCCATCA
ACGCTGCCAGCCGGCTGCTGCTGCAACATGTGCAGGTCTGGGACGCCATCACCGTGGAACGGGCCAATCCTTACCGCGGC
ATGGAAGTCTGGGAGCGGGACAGTTTTGGCCGTATCGCCTTCGATGGCGCCGAGCTGGGGTATCCAGAGCTGGGACATAT
TATTGAGAATCCGGTCATTCAACAGGCGCTGTGGCGACGCGCGGGGGAACTGGCGGAGGTGACGCTGATAACGCCCGCCT
CGCTGCGCCAGGTGGCCTGGGGAGAAAACGAAGCGTTTATCACCCTTGACGACGATCGAATGCTGACCGCCCGGCTGGTG
GTGGCAGCGGATGGTGCCCACTCCTTGCTGCGGACCCATGCCGATATCCCGCTGACCTTTTGGGACTATCAACACCATGC
TCTGGTGGCCACCGTTCGCACCGCGCAGCCGCATGGCAATATTGCCCGTCAGACGTTTCACGGTGACGGTATTCTGGCGT
TTTTACCCCTAAGCGATCCTCATTTAAGCTCCATCGTCTGGTCGCTGCTGCCGGCGGTGGCGCGTGAACGCCTGACGGCG
CCGGCGGAGGCATTCAACGTCGCGCTGGCAACAAACTTCAGCCTGGCCCTGGGTTTATGCGAGTTGCAGGGGGAGCGGCA
AACCTTCCCGCTTACCGGCCGCTATGCGCGTAATTTCGCCGCCCATCGTCTGGTGCTGGTAGGGGATGCCGCCCATACCA
TCCATCCGCTGGCGGGACAGGGCGTGAACCTGGGGTTCATGGATGTCGCGGTGCTTCTGGGAGAGGTGCGTCGCCTGCGA
AAAGCCAGCAAGGATATCGGCCATTACCCGTACTTGCGACGCTACGAGCGCAGCCGCAAACGGAGCGCCGCATTGATGTT
GGCGGGCATGCAGGGCTTTCGCGAGCTCTTCGCCGGCCAGCATCCGCTAAAAAAATGGGTCCGCGACGCGGGGTTGCGGC
TGGCGGATACGCTCCCCGGCGTGAAACCACGCTTCATTCAACAGGCGATAGGATTGCATGATTTACCCCCCTGGCTGGAG
GGCGAGTCCTTCGACTGA

Upstream 100 bases:

>100_bases
GCCATGGCTCATATTCCGTCGCTGCGCGATGCACTGGTGCGTAAAACGCTGGGCTGGGTGGCCCGATGACCCTGTCCCGC
ACGCAAGGATCCAATACGCT

Downstream 100 bases:

>100_bases
ATTATTCTAATTTTACCGCGTCATTTGGATTACATTTTCTAATCTTATTGTCAAACCCCTCCGGGATTAACAAAGCAGTG
GCGGGGTTTTTTGTTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MQAFDIVINGGGMVGLALACGLQGSGLRVAVIERQAPEAIPPADWPALRVSAINAASRLLLQHVQVWDAITVERANPYRG
MEVWERDSFGRIAFDGAELGYPELGHIIENPVIQQALWRRAGELAEVTLITPASLRQVAWGENEAFITLDDDRMLTARLV
VAADGAHSLLRTHADIPLTFWDYQHHALVATVRTAQPHGNIARQTFHGDGILAFLPLSDPHLSSIVWSLLPAVARERLTA
PAEAFNVALATNFSLALGLCELQGERQTFPLTGRYARNFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDVAVLLGEVRRLR
KASKDIGHYPYLRRYERSRKRSAALMLAGMQGFRELFAGQHPLKKWVRDAGLRLADTLPGVKPRFIQQAIGLHDLPPWLE
GESFD

Sequences:

>Translated_405_residues
MQAFDIVINGGGMVGLALACGLQGSGLRVAVIERQAPEAIPPADWPALRVSAINAASRLLLQHVQVWDAITVERANPYRG
MEVWERDSFGRIAFDGAELGYPELGHIIENPVIQQALWRRAGELAEVTLITPASLRQVAWGENEAFITLDDDRMLTARLV
VAADGAHSLLRTHADIPLTFWDYQHHALVATVRTAQPHGNIARQTFHGDGILAFLPLSDPHLSSIVWSLLPAVARERLTA
PAEAFNVALATNFSLALGLCELQGERQTFPLTGRYARNFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDVAVLLGEVRRLR
KASKDIGHYPYLRRYERSRKRSAALMLAGMQGFRELFAGQHPLKKWVRDAGLRLADTLPGVKPRFIQQAIGLHDLPPWLE
GESFD
>Mature_405_residues
MQAFDIVINGGGMVGLALACGLQGSGLRVAVIERQAPEAIPPADWPALRVSAINAASRLLLQHVQVWDAITVERANPYRG
MEVWERDSFGRIAFDGAELGYPELGHIIENPVIQQALWRRAGELAEVTLITPASLRQVAWGENEAFITLDDDRMLTARLV
VAADGAHSLLRTHADIPLTFWDYQHHALVATVRTAQPHGNIARQTFHGDGILAFLPLSDPHLSSIVWSLLPAVARERLTA
PAEAFNVALATNFSLALGLCELQGERQTFPLTGRYARNFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDVAVLLGEVRRLR
KASKDIGHYPYLRRYERSRKRSAALMLAGMQGFRELFAGQHPLKKWVRDAGLRLADTLPGVKPRFIQQAIGLHDLPPWLE
GESFD

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=381, Percent_Identity=29.6587926509186, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI32967307, Length=347, Percent_Identity=28.8184438040346, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI1789273, Length=399, Percent_Identity=66.1654135338346, Blast_Score=542, Evalue=1e-155,
Organism=Escherichia coli, GI1786883, Length=391, Percent_Identity=38.3631713554987, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1789274, Length=393, Percent_Identity=30.7888040712468, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI25146631, Length=437, Percent_Identity=29.2906178489703, Blast_Score=143, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6321694, Length=451, Percent_Identity=23.7250554323725, Blast_Score=90, Evalue=8e-19,
Organism=Drosophila melanogaster, GI19920760, Length=431, Percent_Identity=33.1786542923434, Blast_Score=160, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44576; Mature: 44576

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFDIVINGGGMVGLALACGLQGSGLRVAVIERQAPEAIPPADWPALRVSAINAASRLL
CCEEEEEEECCCCEEHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
LQHVQVWDAITVERANPYRGMEVWERDSFGRIAFDGAELGYPELGHIIENPVIQQALWRR
HHHHHHHHHEEEECCCCCCCCHHHCCCCCCCEEECCCCCCCCHHHHHHCCHHHHHHHHHH
AGELAEVTLITPASLRQVAWGENEAFITLDDDRMLTARLVVAADGAHSLLRTHADIPLTF
CCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCEEEEEEEEEECCHHHHHHHCCCCCEEE
WDYQHHALVATVRTAQPHGNIARQTFHGDGILAFLPLSDPHLSSIVWSLLPAVARERLTA
ECCCCCEEEEEEEECCCCCCHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PAEAFNVALATNFSLALGLCELQGERQTFPLTGRYARNFAAHRLVLVGDAAHTIHPLAGQ
CHHHHEEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCEEEEEECCHHHCCCCCCC
GVNLGFMDVAVLLGEVRRLRKASKDIGHYPYLRRYERSRKRSAALMLAGMQGFRELFAGQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPLKKWVRDAGLRLADTLPGVKPRFIQQAIGLHDLPPWLEGESFD
CHHHHHHHHCCCEEHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQAFDIVINGGGMVGLALACGLQGSGLRVAVIERQAPEAIPPADWPALRVSAINAASRLL
CCEEEEEEECCCCEEHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
LQHVQVWDAITVERANPYRGMEVWERDSFGRIAFDGAELGYPELGHIIENPVIQQALWRR
HHHHHHHHHEEEECCCCCCCCHHHCCCCCCCEEECCCCCCCCHHHHHHCCHHHHHHHHHH
AGELAEVTLITPASLRQVAWGENEAFITLDDDRMLTARLVVAADGAHSLLRTHADIPLTF
CCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCEEEEEEEEEECCHHHHHHHCCCCCEEE
WDYQHHALVATVRTAQPHGNIARQTFHGDGILAFLPLSDPHLSSIVWSLLPAVARERLTA
ECCCCCEEEEEEEECCCCCCHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PAEAFNVALATNFSLALGLCELQGERQTFPLTGRYARNFAAHRLVLVGDAAHTIHPLAGQ
CHHHHEEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCEEEEEECCHHHCCCCCCC
GVNLGFMDVAVLLGEVRRLRKASKDIGHYPYLRRYERSRKRSAALMLAGMQGFRELFAGQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPLKKWVRDAGLRLADTLPGVKPRFIQQAIGLHDLPPWLEGESFD
CHHHHHHHHCCCEEHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]