| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85059814
Identifier: 85059814
GI number: 85059814
Start: 3118108
End: 3118584
Strand: Reverse
Name: 85059814
Synonym: SG1836
Alternate gene names: NA
Gene position: 3118584-3118108 (Counterclockwise)
Preceding gene: 85059815
Following gene: 85059813
Centisome position: 74.77
GC content: 44.23
Gene sequence:
>477_bases TTGTCTGTCGCCCTTGCATTTTATCAACTGAGAGATATGGCGTATCTCATTCATTTTGATAAATTCCGTGCCTCCGTCAC GGCGGATAAAGAAGGACATAATGCTATCAGTTTTGAGATTGACGGTGTGATGGATAAACGTAGTATCTCTTATGGCCGGC ATCACGAAGATGTAAATGCTATCAAACGGCAAACTTTAACGAATTCCGGTGAGTTTTTAGACAGTGCCCATGTCGGCGAT AGACAAATAGAAGCCGCTTTGGCAGAGGTTAGTTACGATAAAGATCTTAACCTGTTTACGGTAGTATACCAGGGTAACTG GGACAGATTGTGTTTAGACAGGCTAACTACGGCGACCAAAGACGCGATGGCAATGCACCCCAGCCTCGCGCAAGAGTGGC TGACTCTACATATGAAATCTTTTGATTATTTTGCCAGACTCCGTTCTTCCCGAGTTATGCTCATTTCTGGTGTATGA
Upstream 100 bases:
>100_bases AAAATTAAAGATTGGTTCTGTGGTACAAAAACCAGTGAGGTACTGGAAAGAATTTTTATGCTCACTCAATATTGAGGATA ACGTTAATACGGAATAGGCT
Downstream 100 bases:
>100_bases GGTTTCGGAGAAGGTGGCGTATCCTGCTGATTGATTCCGTGGATGATTTCAACAACAGAGAGACGATACGCCATGAAAAA GTCTACCCTACAGGTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSVALAFYQLRDMAYLIHFDKFRASVTADKEGHNAISFEIDGVMDKRSISYGRHHEDVNAIKRQTLTNSGEFLDSAHVGD RQIEAALAEVSYDKDLNLFTVVYQGNWDRLCLDRLTTATKDAMAMHPSLAQEWLTLHMKSFDYFARLRSSRVMLISGV
Sequences:
>Translated_158_residues MSVALAFYQLRDMAYLIHFDKFRASVTADKEGHNAISFEIDGVMDKRSISYGRHHEDVNAIKRQTLTNSGEFLDSAHVGD RQIEAALAEVSYDKDLNLFTVVYQGNWDRLCLDRLTTATKDAMAMHPSLAQEWLTLHMKSFDYFARLRSSRVMLISGV >Mature_157_residues SVALAFYQLRDMAYLIHFDKFRASVTADKEGHNAISFEIDGVMDKRSISYGRHHEDVNAIKRQTLTNSGEFLDSAHVGDR QIEAALAEVSYDKDLNLFTVVYQGNWDRLCLDRLTTATKDAMAMHPSLAQEWLTLHMKSFDYFARLRSSRVMLISGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18039; Mature: 17907
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVALAFYQLRDMAYLIHFDKFRASVTADKEGHNAISFEIDGVMDKRSISYGRHHEDVNA CCHHHHHHHHHHHHHEEEHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH IKRQTLTNSGEFLDSAHVGDRQIEAALAEVSYDKDLNLFTVVYQGNWDRLCLDRLTTATK HHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHH DAMAMHPSLAQEWLTLHMKSFDYFARLRSSRVMLISGV HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure SVALAFYQLRDMAYLIHFDKFRASVTADKEGHNAISFEIDGVMDKRSISYGRHHEDVNA CHHHHHHHHHHHHHEEEHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH IKRQTLTNSGEFLDSAHVGDRQIEAALAEVSYDKDLNLFTVVYQGNWDRLCLDRLTTATK HHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHH DAMAMHPSLAQEWLTLHMKSFDYFARLRSSRVMLISGV HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA