| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059813
Identifier: 85059813
GI number: 85059813
Start: 3116268
End: 3116804
Strand: Reverse
Name: 85059813
Synonym: SG1835
Alternate gene names: NA
Gene position: 3116804-3116268 (Counterclockwise)
Preceding gene: 85059814
Following gene: 85059808
Centisome position: 74.72
GC content: 51.02
Gene sequence:
>537_bases ATGGCAAAGCAAAAGTTTAAAATAACCAACTGGTCCACTTACAACAAAGCTCTCAAGCAGCGCGGGGCTCTGACGATATG GCTGGATGAGTCGGCAATTGTTGCATGGACGGAAAAAACGACGCCTGAACGGCGTGGCCGGCCGCTTCACTACGCAGATA TGGCTATCACCACTGTTCTGATGATGAAACGCGTGTTTGGCCTTTCGTTAAGGGCTTTACAGGGCTTCGTTGACGCCATT TTTAAACTGATGGTGCTACCGCTAAGATACCCAGACTACTCGCTGATCAGCAAGCGAGCAAAGACAGTTAAGATCAGCAT AAAAACGCCGACCCGTGGTGAAATCTCACCTCTAGTCATTGACGGAACCGGCCTGAAGGTCTTTGGCGAAGGCGAATGGA AAGTCCGACAGCATGGTGCCGACAGACGGAGGGTGTGGCGTAAGCTGCATATGGCCGCAGACAGTGTAACGCATGAAATT ATCTGTGCTACTTATCGCTCAGCGGTACGACGGATACTCAGGCCCTACCAGTTCTGA
Upstream 100 bases:
>100_bases AGGCCCAGGAAATGGCAATGTTTATGGCTTTATTGAATAAATATAACTTTTAGGTGATCGTCTGCTCAGATCACTACCGT CATTTCAACATCTGCACTCC
Downstream 100 bases:
>100_bases TAAACCAGACCCTGCGGAAAATCAGGGAAGTGTTGGCTGATGGCGCTTACGATACCCGCTACTGTCATGATGCTCTGCTG AGGAAGAAAATAAGGCCTCG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAKQKFKITNWSTYNKALKQRGALTIWLDESAIVAWTEKTTPERRGRPLHYADMAITTVLMMKRVFGLSLRALQGFVDAI FKLMVLPLRYPDYSLISKRAKTVKISIKTPTRGEISPLVIDGTGLKVFGEGEWKVRQHGADRRRVWRKLHMAADSVTHEI ICATYRSAVRRILRPYQF
Sequences:
>Translated_178_residues MAKQKFKITNWSTYNKALKQRGALTIWLDESAIVAWTEKTTPERRGRPLHYADMAITTVLMMKRVFGLSLRALQGFVDAI FKLMVLPLRYPDYSLISKRAKTVKISIKTPTRGEISPLVIDGTGLKVFGEGEWKVRQHGADRRRVWRKLHMAADSVTHEI ICATYRSAVRRILRPYQF >Mature_177_residues AKQKFKITNWSTYNKALKQRGALTIWLDESAIVAWTEKTTPERRGRPLHYADMAITTVLMMKRVFGLSLRALQGFVDAIF KLMVLPLRYPDYSLISKRAKTVKISIKTPTRGEISPLVIDGTGLKVFGEGEWKVRQHGADRRRVWRKLHMAADSVTHEII CATYRSAVRRILRPYQF
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 20550; Mature: 20418
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQKFKITNWSTYNKALKQRGALTIWLDESAIVAWTEKTTPERRGRPLHYADMAITTVL CCCCCEEECCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHCCCCCCHHHHHHHHHH MMKRVFGLSLRALQGFVDAIFKLMVLPLRYPDYSLISKRAKTVKISIKTPTRGEISPLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEE DGTGLKVFGEGEWKVRQHGADRRRVWRKLHMAADSVTHEIICATYRSAVRRILRPYQF ECCCEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKQKFKITNWSTYNKALKQRGALTIWLDESAIVAWTEKTTPERRGRPLHYADMAITTVL CCCCEEECCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHCCCCCCHHHHHHHHHH MMKRVFGLSLRALQGFVDAIFKLMVLPLRYPDYSLISKRAKTVKISIKTPTRGEISPLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEE DGTGLKVFGEGEWKVRQHGADRRRVWRKLHMAADSVTHEIICATYRSAVRRILRPYQF ECCCEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]