| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059808
Identifier: 85059808
GI number: 85059808
Start: 3104500
End: 3104832
Strand: Reverse
Name: 85059808
Synonym: SG1830
Alternate gene names: NA
Gene position: 3104832-3104500 (Counterclockwise)
Preceding gene: 85059813
Following gene: 85059803
Centisome position: 74.44
GC content: 48.95
Gene sequence:
>333_bases ATGGGCCAAGTTGCATTTGATACATTGCAGGCGTCAGAAGAGCTTGAAACCGCTGGCATCTCTAGAGATCAGGCTAGGGC GATTTCGCTCGTTGTACGCAAGTCTCATGAGGTGACGGATGTTGCAACCAAGCGTGACCTTGAGGACGTGCGCAAGGATC TGACTTTTCAGATAACTGACGTTCGCAAGGATATGCAATTAGTCCGCAAAGATTTACAGCTTGAGATGGCTGGGATCCGC TCTGAGCAAAAGGTAATACGCTGGATGCTCGGCTTTGGGGTTATCGGTATTCTTTCTTTGGTCGTGAAAGCGTTTGTAAT GCCTGCGCTGTAA
Upstream 100 bases:
>100_bases CCTGTTGGCGTAGGCAAGGTTTGGTTATAGTTCATGGAGGTAACTCCTTCCGTTGATGTGGTGGATACGCTACACTTGGC CTAAACAGGAGGATTTCCCC
Downstream 100 bases:
>100_bases AACGGGTGATTGTGGTGTATGCCTAGATTCAGTAAAAACAATACATCTGTTTGTTTTTACTAAAATTATAAGTGTTAATC TTTATCCTCAGCGACACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MGQVAFDTLQASEELETAGISRDQARAISLVVRKSHEVTDVATKRDLEDVRKDLTFQITDVRKDMQLVRKDLQLEMAGIR SEQKVIRWMLGFGVIGILSLVVKAFVMPAL
Sequences:
>Translated_110_residues MGQVAFDTLQASEELETAGISRDQARAISLVVRKSHEVTDVATKRDLEDVRKDLTFQITDVRKDMQLVRKDLQLEMAGIR SEQKVIRWMLGFGVIGILSLVVKAFVMPAL >Mature_109_residues GQVAFDTLQASEELETAGISRDQARAISLVVRKSHEVTDVATKRDLEDVRKDLTFQITDVRKDMQLVRKDLQLEMAGIRS EQKVIRWMLGFGVIGILSLVVKAFVMPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12373; Mature: 12241
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVAFDTLQASEELETAGISRDQARAISLVVRKSHEVTDVATKRDLEDVRKDLTFQITD CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VRKDMQLVRKDLQLEMAGIRSEQKVIRWMLGFGVIGILSLVVKAFVMPAL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GQVAFDTLQASEELETAGISRDQARAISLVVRKSHEVTDVATKRDLEDVRKDLTFQITD CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VRKDMQLVRKDLQLEMAGIRSEQKVIRWMLGFGVIGILSLVVKAFVMPAL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA