| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is ymfN [C]
Identifier: 85059803
GI number: 85059803
Start: 3097843
End: 3098304
Strand: Reverse
Name: ymfN [C]
Synonym: SG1825
Alternate gene names: 85059803
Gene position: 3098304-3097843 (Counterclockwise)
Preceding gene: 85059808
Following gene: 85059802
Centisome position: 74.28
GC content: 46.75
Gene sequence:
>462_bases ATGAGTATGTCATTGATAGCTAAGGCTATGAATATCAAAGTCGGTAACCCTATACGTAAACTGGTTCTCCTTAAGCTGGC TGATAATGCCAATGACAAAGGGGAGTGCTGGCCTTCGTATCAGCATATTGCCGATCATTGTGAATGCAGTAAAAGCACAG TTCGAGATCACATTGATGCACTGGAAAAAGCGGGTTTGTTGGTAAAAGAAAATCGTACCGGCACAAATAATGGTAAAGGT AATACATTCAACGTTTACCATCTGAAATTGGATAACCCTATGCCGACTCCCAGCACACCCCCTATGCCGACAGGCGGCAC CAGAATTAGTCACTCTTTTGAACCAGTTATGGAACCTAAAACCCCCTTACCCCCTACCGGGGGCCTCTCCCCGGAACCGG CAGGAAAAAACCAAACCCCCAACCAAAACCTGACCAGCTTTCCACGCAGGACTATCAGGTAG
Upstream 100 bases:
>100_bases CGGATTATCCCGGTGGGTTAGAGGACATCGCCCAGCGCAATACGGCTTTTGGTAAGCGTCTGGTGGAAGAATTCCGCAAG TTGAAGGAGAAGTCAGAAAA
Downstream 100 bases:
>100_bases CACTGGCAATCTACAACGACACGGTAGCCGACAGACTCCCCCACGCTGTAGAGCTTAACGACAAGCGGCGCGAGGGTATC AAACGACTCATGGGTCAGCT
Product: putative phage replication protein
Products: NA
Alternate protein names: Phage Replication Protein; Replication Protein Phage; Transcriptional Regulator; Bacteriophage Replication Protein; Replication Of DNA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKG NTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPLPPTGGLSPEPAGKNQTPNQNLTSFPRRTIR
Sequences:
>Translated_153_residues MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKG NTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPLPPTGGLSPEPAGKNQTPNQNLTSFPRRTIR >Mature_152_residues SMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDALEKAGLLVKENRTGTNNGKGN TFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPKTPLPPTGGLSPEPAGKNQTPNQNLTSFPRRTIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16738; Mature: 16607
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDA CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH LEKAGLLVKENRTGTNNGKGNTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPK HHHCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPLPPTGGLSPEPAGKNQTPNQNLTSFPRRTIR CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCC >Mature Secondary Structure SMSLIAKAMNIKVGNPIRKLVLLKLADNANDKGECWPSYQHIADHCECSKSTVRDHIDA CHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH LEKAGLLVKENRTGTNNGKGNTFNVYHLKLDNPMPTPSTPPMPTGGTRISHSFEPVMEPK HHHCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPLPPTGGLSPEPAGKNQTPNQNLTSFPRRTIR CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA