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The map label for this gene is dedA [H]

Identifier: 85059596

GI number: 85059596

Start: 2774208

End: 2774870

Strand: Reverse

Name: dedA [H]

Synonym: SG1618

Alternate gene names: 85059596

Gene position: 2774870-2774208 (Counterclockwise)

Preceding gene: 85059597

Following gene: 85059595

Centisome position: 66.53

GC content: 52.04

Gene sequence:

>663_bases
ATGGAATATATTAAATTTATTATCGATTTTATTTTGCACATTGATGTACATCTGGCAGAGCTGGTGGCGCAGTACGGTGT
CTGGGTGTATGCGTTTTTGTTTCTGATTCTGTTTTGCGAAACCGGCCTGGTAGTAACGCCCTTCCTGCCGGGAGACTCAC
TGCTGTTTGTCGCCGGCGCGCTGGCGGCGCTGCCGAGTAACGGGCTCGATATTCATGTGATGGTGCTGTTGATGGTGCTG
GCGGCAATCGCCGGTGATGCGGTGAATTATACGATTGGCCGTCTGTTCGGTGAAAAGCTGTTTAGCAATCCGGACTCCAA
AATCTTTCGCCGCCGCTATCTGGACAAAACCCATGAGTTTTATGCCCGGCACGGGGGTAAAACCATCATTCTGGCGCGCT
TTGTACCCATCGTGCGGACCTTCGCGCCGTTCGTGGCCGGCATGGGTAATATGCGTTACCGCCATTTTGCGCTCTACAAT
GTCACGGGTGGACTGATGTGGGTATTGTTATTCAGCTACGCTGGCTATTTCTTTGGCAATATGCCGATGGTGCAGCAAAA
TCTGAAGTGGCTTATCGTGGCGATTATCCTGCTGTCGGTGCTGCCGGGCGTCATTGAAGTGTGGCGTCAGCGCCGGATGG
CTGCCAACGGTAAAAGTAAGTAA

Upstream 100 bases:

>100_bases
CCGTCGCGTTTTTCCCTGCCCGCGTCGTCGTCGCCGGGGCCGTTATTTCTTGCGGATTAACCGCTTACTTTTTATCGACT
TGCGTTACCGGGAAAACTGA

Downstream 100 bases:

>100_bases
TTTCCCGAAGCCTGCGTGCAGAATGTGAACAAAGCATAGAGTTTTCTGTGCCAAGTCGCTGGCCATTATGGTTTAATGGG
CAACCTTTGGCACGCCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEYIKFIIDFILHIDVHLAELVAQYGVWVYAFLFLILFCETGLVVTPFLPGDSLLFVAGALAALPSNGLDIHVMVLLMVL
AAIAGDAVNYTIGRLFGEKLFSNPDSKIFRRRYLDKTHEFYARHGGKTIILARFVPIVRTFAPFVAGMGNMRYRHFALYN
VTGGLMWVLLFSYAGYFFGNMPMVQQNLKWLIVAIILLSVLPGVIEVWRQRRMAANGKSK

Sequences:

>Translated_220_residues
MEYIKFIIDFILHIDVHLAELVAQYGVWVYAFLFLILFCETGLVVTPFLPGDSLLFVAGALAALPSNGLDIHVMVLLMVL
AAIAGDAVNYTIGRLFGEKLFSNPDSKIFRRRYLDKTHEFYARHGGKTIILARFVPIVRTFAPFVAGMGNMRYRHFALYN
VTGGLMWVLLFSYAGYFFGNMPMVQQNLKWLIVAIILLSVLPGVIEVWRQRRMAANGKSK
>Mature_220_residues
MEYIKFIIDFILHIDVHLAELVAQYGVWVYAFLFLILFCETGLVVTPFLPGDSLLFVAGALAALPSNGLDIHVMVLLMVL
AAIAGDAVNYTIGRLFGEKLFSNPDSKIFRRRYLDKTHEFYARHGGKTIILARFVPIVRTFAPFVAGMGNMRYRHFALYN
VTGGLMWVLLFSYAGYFFGNMPMVQQNLKWLIVAIILLSVLPGVIEVWRQRRMAANGKSK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=80.9523809523809, Blast_Score=355, Evalue=2e-99,
Organism=Escherichia coli, GI1789481, Length=155, Percent_Identity=34.8387096774194, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1789384, Length=192, Percent_Identity=29.6875, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24886; Mature: 24886

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIKFIIDFILHIDVHLAELVAQYGVWVYAFLFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LAALPSNGLDIHVMVLLMVLAAIAGDAVNYTIGRLFGEKLFSNPDSKIFRRRYLDKTHEF
HHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YARHGGKTIILARFVPIVRTFAPFVAGMGNMRYRHFALYNVTGGLMWVLLFSYAGYFFGN
HHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPMVQQNLKWLIVAIILLSVLPGVIEVWRQRRMAANGKSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEYIKFIIDFILHIDVHLAELVAQYGVWVYAFLFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LAALPSNGLDIHVMVLLMVLAAIAGDAVNYTIGRLFGEKLFSNPDSKIFRRRYLDKTHEF
HHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YARHGGKTIILARFVPIVRTFAPFVAGMGNMRYRHFALYNVTGGLMWVLLFSYAGYFFGN
HHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPMVQQNLKWLIVAIILLSVLPGVIEVWRQRRMAANGKSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]