| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is hisB
Identifier: 85059105
GI number: 85059105
Start: 1869213
End: 1870280
Strand: Reverse
Name: hisB
Synonym: SG1127
Alternate gene names: 85059105
Gene position: 1870280-1869213 (Counterclockwise)
Preceding gene: 85059106
Following gene: 85059104
Centisome position: 44.84
GC content: 58.99
Gene sequence:
>1068_bases GTGAATCAGAAAGTCCTGTTTATCGATCGTGATGGCACGCTCATCAACGAACCCCCCGCGGATTTCCAGGTGGACCGCAT GGATAAGTTGGCGCTGGAGCCAGGTGTCATCCCCGTGCTGCTGGCGCTGCAAAAAGCCGGCTTCCGACTGGTTATGATTA CCAACCAGGACGGCCTGGGTACCACCAGTTTTCCCCAGGCGGATTTCGACGGGCCGCATGATCTGATGATGGCCATCTTC ACCTCCCAGGGCATTGTTTTTGATGAGGTGTTGATTTGCCCGCATTTACCCACCGACGGCTGCGCGTGCCGCAAACCACA GACGGGGATAGTGACGCCCTGGCTGAAAGAGCACGCGCTAGATAGCGCCCACAGCTATGTCATCGGCGACCGGGAAACCG ACATGGCGCTCGCGGCCAATATGGGTATCACCGGGCTGAGGTATCAGCGCGCGTCGCTCAATTGGCCGGCGATTGGCGAA CAGCTGACCCGCAGCGACCGCCACGCACGCGTTAATCGCGTCACGCGGGAAACCGCCATCGATGTGGAAGTCTGGCTCGA TCGGGAAGGCGACAGCCGAATCAACACCGGCATCGGTTTTTTCGATCACATGCTCGATCAGATTGCCACCCACGGCGGAC TGCGCATTAATATCGCTGTTAAGGGGGATCTGCATATCGATGATCACCACACGGTGGAAGATACCGCGCTGGCGCTGGGG GAAGCGCTGAATAAGGCGCTGGGAGACAAACGCGGTATTGGCCGCTTTGGGTTCGTGCTGCCGATGGACGAGTGCCTGGC GCGCTGCGCGCTGGATATCTCCGGCCGACCGCATCTGGAATACAAAGCCAAGTACAGTTTCCAGCGGGTAGGCGATCTCA GCACCGAGATGGTAGAGCATTTCTTCCGTTCACTTTCCTATGCCATGGCCTGCACGCTGCATCTGCGCACCAAAGGCAAG AATGATCATCATCGGGTGGAGAGCCTGTTTAAAGCCTTCGGCCGCACGCTGCGCCAGGCCATCCGCGTGGAGGGCGACAC GCTGCCCAGCTCAAAAGGAGTGCTGTGA
Upstream 100 bases:
>100_bases TGGCCGATTGTTTGCGTATTACCATCGGCACTTTGGCGGAGTGCCAGAGCGTGATTGCAGTGTTAAGGGCGTTGAAACCC TCTTCCAGCAAGGAGTCCCT
Downstream 100 bases:
>100_bases TGAACGTGGTTGTGCTGGATACCGGCTGCGCCAATCTGTTCTCGGTCACCGCTGCGATACGTCGCCTGGGCTATGAACCG GTCGTCAGCAGCAACGCCGA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNQKVLFIDRDGTLINEPPADFQVDRMDKLALEPGVIPVLLALQKAGFRLVMITNQDGLGTTSFPQADFDGPHDLMMAIF TSQGIVFDEVLICPHLPTDGCACRKPQTGIVTPWLKEHALDSAHSYVIGDRETDMALAANMGITGLRYQRASLNWPAIGE QLTRSDRHARVNRVTRETAIDVEVWLDREGDSRINTGIGFFDHMLDQIATHGGLRINIAVKGDLHIDDHHTVEDTALALG EALNKALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAKYSFQRVGDLSTEMVEHFFRSLSYAMACTLHLRTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Sequences:
>Translated_355_residues MNQKVLFIDRDGTLINEPPADFQVDRMDKLALEPGVIPVLLALQKAGFRLVMITNQDGLGTTSFPQADFDGPHDLMMAIF TSQGIVFDEVLICPHLPTDGCACRKPQTGIVTPWLKEHALDSAHSYVIGDRETDMALAANMGITGLRYQRASLNWPAIGE QLTRSDRHARVNRVTRETAIDVEVWLDREGDSRINTGIGFFDHMLDQIATHGGLRINIAVKGDLHIDDHHTVEDTALALG EALNKALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAKYSFQRVGDLSTEMVEHFFRSLSYAMACTLHLRTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >Mature_355_residues MNQKVLFIDRDGTLINEPPADFQVDRMDKLALEPGVIPVLLALQKAGFRLVMITNQDGLGTTSFPQADFDGPHDLMMAIF TSQGIVFDEVLICPHLPTDGCACRKPQTGIVTPWLKEHALDSAHSYVIGDRETDMALAANMGITGLRYQRASLNWPAIGE QLTRSDRHARVNRVTRETAIDVEVWLDREGDSRINTGIGFFDHMLDQIATHGGLRINIAVKGDLHIDDHHTVEDTALALG EALNKALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAKYSFQRVGDLSTEMVEHFFRSLSYAMACTLHLRTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=81.1267605633803, Blast_Score=608, Evalue=1e-175, Organism=Escherichia coli, GI1786399, Length=150, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=40.3669724770642, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_SODGM (Q2NTX3)
Other databases:
- EMBL: AP008232 - RefSeq: YP_454807.1 - ProteinModelPortal: Q2NTX3 - STRING: Q2NTX3 - GeneID: 3867555 - GenomeReviews: AP008232_GR - KEGG: sgl:SG1127 - NMPDR: fig|343509.6.peg.2310 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: QDGLGTP - PhylomeDB: Q2NTX3 - ProtClustDB: PRK05446 - BioCyc: SGLO343509:SG1127-MONOMER - GO: GO:0005737 - HAMAP: MF_01022 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01662 - TIGRFAMs: TIGR01261 - TIGRFAMs: TIGR01656
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P; SSF54211 Ribosomal_S5_D2-typ_fold; SSF56784 SSF56784
EC number: =3.1.3.15; =4.2.1.19
Molecular weight: Translated: 39470; Mature: 39470
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKVLFIDRDGTLINEPPADFQVDRMDKLALEPGVIPVLLALQKAGFRLVMITNQDGLG CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCC TTSFPQADFDGPHDLMMAIFTSQGIVFDEVLICPHLPTDGCACRKPQTGIVTPWLKEHAL CCCCCCCCCCCHHHHHHHHHHCCCCEEEHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH DSAHSYVIGDRETDMALAANMGITGLRYQRASLNWPAIGEQLTRSDRHARVNRVTRETAI HCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEE DVEVWLDREGDSRINTGIGFFDHMLDQIATHGGLRINIAVKGDLHIDDHHTVEDTALALG EEEEEEECCCCCCHHCCHHHHHHHHHHHHHCCCEEEEEEEEECEEECCCCCHHHHHHHHH EALNKALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAKYSFQRVGDLSTEMVEH HHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHH FFRSLSYAMACTLHLRTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNQKVLFIDRDGTLINEPPADFQVDRMDKLALEPGVIPVLLALQKAGFRLVMITNQDGLG CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCC TTSFPQADFDGPHDLMMAIFTSQGIVFDEVLICPHLPTDGCACRKPQTGIVTPWLKEHAL CCCCCCCCCCCHHHHHHHHHHCCCCEEEHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH DSAHSYVIGDRETDMALAANMGITGLRYQRASLNWPAIGEQLTRSDRHARVNRVTRETAI HCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEE DVEVWLDREGDSRINTGIGFFDHMLDQIATHGGLRINIAVKGDLHIDDHHTVEDTALALG EEEEEEECCCCCCHHCCHHHHHHHHHHHHHCCCEEEEEEEEECEEECCCCCHHHHHHHHH EALNKALGDKRGIGRFGFVLPMDECLARCALDISGRPHLEYKAKYSFQRVGDLSTEMVEH HHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHH FFRSLSYAMACTLHLRTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA