| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is hisC
Identifier: 85059106
GI number: 85059106
Start: 1870277
End: 1871359
Strand: Reverse
Name: hisC
Synonym: SG1128
Alternate gene names: 85059106
Gene position: 1871359-1870277 (Counterclockwise)
Preceding gene: 85059107
Following gene: 85059105
Centisome position: 44.86
GC content: 60.57
Gene sequence:
>1083_bases ATGAGCATTCATCACTTAGCCCGCGCCAACGTGCTGGCGCTGGAGCCTTATCTCTCCGCGCGCCGGCTGGGCGGCCAAGG CAATATTTGGCTGAACGCCAATGAGTATCCCCTTCCGCCGGGGTACGGGTTGCGCGGCGGCAATCTCAACCGCTATCCTG CCTGTCAACCGGCCGGCGTTATCAACGGTTATGCAGCCTACGCGGGTGTACAGCCGGAGCAGGTGGTAGTTTGCCGCGGC GCCGATGAGGGCATAGAGTTACTCATCCGCGCGTTTTGCGAGCCGGGCGCCGATGCCATTCTGTTTTGCCCGCCCACCTA CGGCATGTATAGCGTCAGCGCCGAAACGTTCGGCATCGCGCGCCGCACGGTTGAGGCCCGTCAGGACTGGCAGCTGGATC TGCAGGCGATTCGCGCGCGGCTCGACGGCGTGAAGCTGGTGTATATTTGCAGCCCCAACAACCCCACCGGCAACCTGATA GACCTCGAGACGCTACGCGCGATGCTGGAAATGACCCACGGCCGCGCGCTGCTGGTGGTCGATGAAGCCTATATCGATTT TTGCCCGCAGGCGAGCGTGGTGAACTGGCTCGCCGAATACCCGCATCTGGTCATTCTGCGTACCCTGTCCAAGGCCTTCG CCCTGGCCGGTCTGCGCTGCGGTTTTGTCCTGGCGAATGTCGAGGTGATTCAACTGTTGTTAAAAGTCATAGCCCCCTAC CCGCTGGCGCTGCCGGTGGCGGATATCGCCGAGCAGGCGCTTTCGGACGAGGGATTGCGGCAAATGCGGACGCGGGTGGC AGAGATCAACACCAACCGCGAGACGCTGGCGCATGGGTTGGCGGATTGCCCTTGTATTTGCGCGGTGTATCCCAGCGTCA GCAATTATTTGCTGGTCCGGTGCGATCCGGCCTATCGGGTGTTCAAAACCCTCTGGGATCAGGGTACGATTTTACGCGAT CAAAGCAAACAACCGGGCTTGGCCGATTGTTTGCGTATTACCATCGGCACTTTGGCGGAGTGCCAGAGCGTGATTGCAGT GTTAAGGGCGTTGAAACCCTCTTCCAGCAAGGAGTCCCTGTGA
Upstream 100 bases:
>100_bases TGGCACTGGCGCCGACGGTTGAAACCCTGGCGCAGGCCGAGCGCCTGACCGCACACAAAAACGCCATCACACTGCGCGTT GCCGCGCTCAAGGAGCCGCA
Downstream 100 bases:
>100_bases ATCAGAAAGTCCTGTTTATCGATCGTGATGGCACGCTCATCAACGAACCCCCCGCGGATTTCCAGGTGGACCGCATGGAT AAGTTGGCGCTGGAGCCAGG
Product: histidinol-phosphate aminotransferase HisC
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSIHHLARANVLALEPYLSARRLGGQGNIWLNANEYPLPPGYGLRGGNLNRYPACQPAGVINGYAAYAGVQPEQVVVCRG ADEGIELLIRAFCEPGADAILFCPPTYGMYSVSAETFGIARRTVEARQDWQLDLQAIRARLDGVKLVYICSPNNPTGNLI DLETLRAMLEMTHGRALLVVDEAYIDFCPQASVVNWLAEYPHLVILRTLSKAFALAGLRCGFVLANVEVIQLLLKVIAPY PLALPVADIAEQALSDEGLRQMRTRVAEINTNRETLAHGLADCPCICAVYPSVSNYLLVRCDPAYRVFKTLWDQGTILRD QSKQPGLADCLRITIGTLAECQSVIAVLRALKPSSSKESL
Sequences:
>Translated_360_residues MSIHHLARANVLALEPYLSARRLGGQGNIWLNANEYPLPPGYGLRGGNLNRYPACQPAGVINGYAAYAGVQPEQVVVCRG ADEGIELLIRAFCEPGADAILFCPPTYGMYSVSAETFGIARRTVEARQDWQLDLQAIRARLDGVKLVYICSPNNPTGNLI DLETLRAMLEMTHGRALLVVDEAYIDFCPQASVVNWLAEYPHLVILRTLSKAFALAGLRCGFVLANVEVIQLLLKVIAPY PLALPVADIAEQALSDEGLRQMRTRVAEINTNRETLAHGLADCPCICAVYPSVSNYLLVRCDPAYRVFKTLWDQGTILRD QSKQPGLADCLRITIGTLAECQSVIAVLRALKPSSSKESL >Mature_359_residues SIHHLARANVLALEPYLSARRLGGQGNIWLNANEYPLPPGYGLRGGNLNRYPACQPAGVINGYAAYAGVQPEQVVVCRGA DEGIELLIRAFCEPGADAILFCPPTYGMYSVSAETFGIARRTVEARQDWQLDLQAIRARLDGVKLVYICSPNNPTGNLID LETLRAMLEMTHGRALLVVDEAYIDFCPQASVVNWLAEYPHLVILRTLSKAFALAGLRCGFVLANVEVIQLLLKVIAPYP LALPVADIAEQALSDEGLRQMRTRVAEINTNRETLAHGLADCPCICAVYPSVSNYLLVRCDPAYRVFKTLWDQGTILRDQ SKQPGLADCLRITIGTLAECQSVIAVLRALKPSSSKESL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=350, Percent_Identity=66, Blast_Score=476, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6322075, Length=379, Percent_Identity=32.4538258575198, Blast_Score=162, Evalue=7e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_SODGM (Q2NTX2)
Other databases:
- EMBL: AP008232 - RefSeq: YP_454808.1 - ProteinModelPortal: Q2NTX2 - SMR: Q2NTX2 - STRING: Q2NTX2 - GeneID: 3867556 - GenomeReviews: AP008232_GR - KEGG: sgl:SG1128 - NMPDR: fig|343509.6.peg.2311 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: FKTLWDQ - PhylomeDB: Q2NTX2 - BioCyc: SGLO343509:SG1128-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39380; Mature: 39249
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHHLARANVLALEPYLSARRLGGQGNIWLNANEYPLPPGYGLRGGNLNRYPACQPAGV CCCCHHHHCCEEEECCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC INGYAAYAGVQPEQVVVCRGADEGIELLIRAFCEPGADAILFCPPTYGMYSVSAETFGIA CCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEECHHHHHHH RRTVEARQDWQLDLQAIRARLDGVKLVYICSPNNPTGNLIDLETLRAMLEMTHGRALLVV HHHHHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEHHHHHHHHHHCCCCEEEEE DEAYIDFCPQASVVNWLAEYPHLVILRTLSKAFALAGLRCGFVLANVEVIQLLLKVIAPY EHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLALPVADIAEQALSDEGLRQMRTRVAEINTNRETLAHGLADCPCICAVYPSVSNYLLVR CCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEE CDPAYRVFKTLWDQGTILRDQSKQPGLADCLRITIGTLAECQSVIAVLRALKPSSSKESL ECHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SIHHLARANVLALEPYLSARRLGGQGNIWLNANEYPLPPGYGLRGGNLNRYPACQPAGV CCCHHHHCCEEEECCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC INGYAAYAGVQPEQVVVCRGADEGIELLIRAFCEPGADAILFCPPTYGMYSVSAETFGIA CCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEECHHHHHHH RRTVEARQDWQLDLQAIRARLDGVKLVYICSPNNPTGNLIDLETLRAMLEMTHGRALLVV HHHHHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEHHHHHHHHHHCCCCEEEEE DEAYIDFCPQASVVNWLAEYPHLVILRTLSKAFALAGLRCGFVLANVEVIQLLLKVIAPY EHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLALPVADIAEQALSDEGLRQMRTRVAEINTNRETLAHGLADCPCICAVYPSVSNYLLVR CCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEE CDPAYRVFKTLWDQGTILRDQSKQPGLADCLRITIGTLAECQSVIAVLRALKPSSSKESL ECHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA