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The map label for this gene is sodA [H]

Identifier: 85057995

GI number: 85057995

Start: 31283

End: 31900

Strand: Reverse

Name: sodA [H]

Synonym: SG0017

Alternate gene names: 85057995

Gene position: 31900-31283 (Counterclockwise)

Preceding gene: 85057997

Following gene: 85057988

Centisome position: 0.76

GC content: 55.18

Gene sequence:

>618_bases
ATGAGCTTTACGCTACCTTCCCTGCTTTATGGCTATGACGCCCTGGAACCGCATTTCGACAAAGAAACGATGGAAATTCA
TCACACTAAACACCATCAGACCTATGTCAATAACACCAATGGCGCCTTGGAAAGCCTGCCAGAATTTGCCAACTTGCCCG
TCGACGACTTGATCCAAAAACTGGACCAGCTTCCGGCGGACAAAAAGACCATGCTGCGCAACAACGCCGGCGGCCATGCC
AATCACAGCCTGTTCTGGAAGGGGTTGAAACAAGGTACGACCCTGCAGGGCGAACTGAAAAGCGCTATCGAACGTGATTT
CGGCAGCGTTGACGCGTTTAAGGAAGCGTTCGAGAAGGCCGCCGCCACCCGCTTCGGTTCCGGCTGGGCCTGGCTTGTGA
AAAAAGACGGCAAACTGGCCATCGTGTCCACCGCCAACCAGGACAACCCGCTGATGGGCGAAGCGATTTCTGGGACTTCC
GGCTACCCGATCCTGTGCCTGGACGTCTGGGAGCACGCATACTATCTGAAATACCAGAACCGCCGCCCGGACTACATCAA
GTCATTCTGGAACGTGGTGAACTGGGATGAAGCGGCCGCACGTTTCAGCCACTCCTGA

Upstream 100 bases:

>100_bases
CGTTTTATTCAACATTTAATTAACTATAATGATCGGATTGCTTACGCGACCCTAACATGCATTTAAAGGGGGCCGGTTCA
ACTAAAATGGAGAGATTGAT

Downstream 100 bases:

>100_bases
TCCGGCTCCGCGGCGCACACCGACACCGGTTAGCGCCCGCCCGTCCCCGCCCCAGCGGGGATTTTTTTGCCCGCGCGTCG
GCGAATTAATGCGCGGCCAG

Product: superoxide dismutase

Products: NA

Alternate protein names: MnSOD [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSFTLPSLLYGYDALEPHFDKETMEIHHTKHHQTYVNNTNGALESLPEFANLPVDDLIQKLDQLPADKKTMLRNNAGGHA
NHSLFWKGLKQGTTLQGELKSAIERDFGSVDAFKEAFEKAAATRFGSGWAWLVKKDGKLAIVSTANQDNPLMGEAISGTS
GYPILCLDVWEHAYYLKYQNRRPDYIKSFWNVVNWDEAAARFSHS

Sequences:

>Translated_205_residues
MSFTLPSLLYGYDALEPHFDKETMEIHHTKHHQTYVNNTNGALESLPEFANLPVDDLIQKLDQLPADKKTMLRNNAGGHA
NHSLFWKGLKQGTTLQGELKSAIERDFGSVDAFKEAFEKAAATRFGSGWAWLVKKDGKLAIVSTANQDNPLMGEAISGTS
GYPILCLDVWEHAYYLKYQNRRPDYIKSFWNVVNWDEAAARFSHS
>Mature_204_residues
SFTLPSLLYGYDALEPHFDKETMEIHHTKHHQTYVNNTNGALESLPEFANLPVDDLIQKLDQLPADKKTMLRNNAGGHAN
HSLFWKGLKQGTTLQGELKSAIERDFGSVDAFKEAFEKAAATRFGSGWAWLVKKDGKLAIVSTANQDNPLMGEAISGTSG
YPILCLDVWEHAYYLKYQNRRPDYIKSFWNVVNWDEAAARFSHS

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=203, Percent_Identity=46.7980295566502, Blast_Score=173, Evalue=8e-44,
Organism=Homo sapiens, GI67782305, Length=203, Percent_Identity=46.7980295566502, Blast_Score=173, Evalue=8e-44,
Organism=Homo sapiens, GI67782309, Length=201, Percent_Identity=39.3034825870647, Blast_Score=138, Evalue=3e-33,
Organism=Escherichia coli, GI1790342, Length=203, Percent_Identity=85.7142857142857, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1787946, Length=202, Percent_Identity=44.0594059405941, Blast_Score=159, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17569479, Length=205, Percent_Identity=42.9268292682927, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17506561, Length=203, Percent_Identity=42.3645320197044, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6321796, Length=216, Percent_Identity=40.7407407407407, Blast_Score=149, Evalue=3e-37,
Organism=Drosophila melanogaster, GI17136812, Length=205, Percent_Identity=44.8780487804878, Blast_Score=164, Evalue=3e-41,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23149; Mature: 23018

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTLPSLLYGYDALEPHFDKETMEIHHTKHHQTYVNNTNGALESLPEFANLPVDDLIQK
CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHHHH
LDQLPADKKTMLRNNAGGHANHSLFWKGLKQGTTLQGELKSAIERDFGSVDAFKEAFEKA
HHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
AATRFGSGWAWLVKKDGKLAIVSTANQDNPLMGEAISGTSGYPILCLDVWEHAYYLKYQN
HHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHEEEEECC
RRPDYIKSFWNVVNWDEAAARFSHS
CCCHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure 
SFTLPSLLYGYDALEPHFDKETMEIHHTKHHQTYVNNTNGALESLPEFANLPVDDLIQK
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHHHH
LDQLPADKKTMLRNNAGGHANHSLFWKGLKQGTTLQGELKSAIERDFGSVDAFKEAFEKA
HHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
AATRFGSGWAWLVKKDGKLAIVSTANQDNPLMGEAISGTSGYPILCLDVWEHAYYLKYQN
HHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHEEEEECC
RRPDYIKSFWNVVNWDEAAARFSHS
CCCHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]