| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85057988
Identifier: 85057988
GI number: 85057988
Start: 20622
End: 21623
Strand: Reverse
Name: 85057988
Synonym: SG0010
Alternate gene names: NA
Gene position: 21623-20622 (Counterclockwise)
Preceding gene: 85057995
Following gene: 85057987
Centisome position: 0.52
GC content: 50.6
Gene sequence:
>1002_bases ATGAGCGTAAGTGAGACATGGCTGAAGGCAACCTCTTACCTGTTAATGTTTCTTTTTATCACCCTGATCATCCCGCTGCA TTTGTTTCCCTGCTTTATCGCCGGCTTTCTGGCGTATGAGGTCATCATTTCTCTGACGCCGTGGTTTGAACGTCTGGTGG GCAGCGGCCGCGCACGTTGGGTCGTGGTAACTCTGATTGCCGCATTTGTGGTCATTGCCATGACGCTGGGTATCGTGAGC CTGGTAAGCTTCCTAACCTCGGACATTCAGCGCGGTATCGACATTACCGCCGAAACCAACCGCATCTTTTCCGACGTGAA GAACCGCATTCCTGATTATCTCCCCTCGTTCCTGCCCGAAAGCGCGGAAGAGCTGAAAGATCAGCTCTTTGCCCTGGTCG AGTCCAATTTAATTATTATCCGCAATATGGGCCGCTCTTTCCTGCACGGGCTGATTACCATTTTTATCGGCCTTATTATC GGCGCTGTAATTTCGCTAAATAAGCCGTCCGGGCGCAACACCTATTTTACGCAGCAGTTGCTGGAGCGCCTGCATTATCT CTCTCAGGCGTTTCGCAATATTGTCTTTGCCCAAATTAAAGTGTCGCTGGTCAATACCCTGCTGACGTCGATGATGATTC TGGTGCTGTTCCCCCTGTTCGGCGTGCATCTGCCGCTGGGTAAAACGCTGATCGTGGCTACTTTTATTTTTGGCCTGCTG CCGATTATCGGTAATCTCATTTCCAATTTCATGATTATCATTTCAGCGCTCTCTATCTCTTTGAGCGTGGGGAGTGTGAT GGTACTGTACCTCATCTTGATTCACAAGTTGGAGTATTTCCTCAATGCCGAGATCGTCGGCAGCCGCATCAATGCCAAAT CCTGGGAGCTGCTGCTGGCAATGCTTATCTTCGAGGCGGCGTTTGGTCTGGAAGGATTGGTAGCGGCGCCGATCTATTAC GCTTACCTGAAAACCGAATTGCGGGCGCGGAAACTGATCTGA
Upstream 100 bases:
>100_bases CGATGACGCTGCGGTTTAAGCTGTCGGTGCTATGATTACCGCTTATGCTATTTGCTATTCGCGCAACAAAGGAACCTGCC AGCAATGAAAGGAAAGAAGA
Downstream 100 bases:
>100_bases CCGGTGATGGCCTGCGCGCATGCCTGGCGCCGCCCCTTAGCGGTCACTCCCGGCGGCGTTGTAACGCCGTCAGGGTAAGG GGGATTGCCAGCAGGTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGRARWVVVTLIAAFVVIAMTLGIVS LVSFLTSDIQRGIDITAETNRIFSDVKNRIPDYLPSFLPESAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLII GAVISLNKPSGRNTYFTQQLLERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPLGKTLIVATFIFGLL PIIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLEYFLNAEIVGSRINAKSWELLLAMLIFEAAFGLEGLVAAPIYY AYLKTELRARKLI
Sequences:
>Translated_333_residues MSVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGRARWVVVTLIAAFVVIAMTLGIVS LVSFLTSDIQRGIDITAETNRIFSDVKNRIPDYLPSFLPESAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLII GAVISLNKPSGRNTYFTQQLLERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPLGKTLIVATFIFGLL PIIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLEYFLNAEIVGSRINAKSWELLLAMLIFEAAFGLEGLVAAPIYY AYLKTELRARKLI >Mature_332_residues SVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGRARWVVVTLIAAFVVIAMTLGIVSL VSFLTSDIQRGIDITAETNRIFSDVKNRIPDYLPSFLPESAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLIIG AVISLNKPSGRNTYFTQQLLERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPLGKTLIVATFIFGLLP IIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLEYFLNAEIVGSRINAKSWELLLAMLIFEAAFGLEGLVAAPIYYA YLKTELRARKLI
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37268; Mature: 37137
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGRARW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VVVTLIAAFVVIAMTLGIVSLVSFLTSDIQRGIDITAETNRIFSDVKNRIPDYLPSFLPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHCCC SAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLIIGAVISLNKPSGRNTYFTQQL HHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPLGKTLIVATFIFGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PIIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLEYFLNAEIVGSRINAKSWELLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MLIFEAAFGLEGLVAAPIYYAYLKTELRARKLI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGRARW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VVVTLIAAFVVIAMTLGIVSLVSFLTSDIQRGIDITAETNRIFSDVKNRIPDYLPSFLPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHCCC SAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLIIGAVISLNKPSGRNTYFTQQL HHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPLGKTLIVATFIFGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PIIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLEYFLNAEIVGSRINAKSWELLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MLIFEAAFGLEGLVAAPIYYAYLKTELRARKLI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA