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The map label for this gene is ynfM [H]

Identifier: 84625755

GI number: 84625755

Start: 4621575

End: 4622942

Strand: Reverse

Name: ynfM [H]

Synonym: XOO_4098

Alternate gene names: 84625755

Gene position: 4622942-4621575 (Counterclockwise)

Preceding gene: 84625757

Following gene: 84625753

Centisome position: 93.58

GC content: 67.32

Gene sequence:

>1368_bases
ATGACAACTGCCGGAATCATATATTGGACAGGGGGTGGCGGCGGGCGAATACTCGCCATCCTACGTCTCAAGTGCGCGCT
TGTGCCTTCCTCCGATCGCCGTCCGGGTCCGCTGCTCCACCCATCCCCCAGTACCGTCGCCGGCGCCGGCGCCGACGCAC
TCGCAGCGCTGCGCATCCGCCTGGCACTGTTCCTGGCCGGCTTTGCCACCTTCTCGCTGCTGTACAGCGTGCAGCCGGTG
CTGCCCGAATTCGCGCGCGCCTTCCAGGTGGACGCAGCGACCGCCTCGCTGCCGTTGTCGCTGGCCACCGGTGCACTGGC
CCTGGCGATCTTTTGCGCTGGCGCAGTGTCGGAAAACCTCGGTCGGCGTGGGCTGATGTTCGCGTCCATCGCCATCGCGG
CGGTGCTCAACCTGATCGCGGCATTCCTGCCGCACTGGGGCGCCTTGGTCGTGATACGCACCTTGTCCGGCATCGCGCTG
GGCGGGGTGCCGGCGGTGGCGATGGTGTACCTGGGGGAAGAATTGCCGGCCAACAAGATGGGTGCGGCCACCGGCCTGTA
CGTGGCCGGGAATGCCTTCGGCGGCATGAGCGGGCGCATCGTGATGAGCGTGCTGACCGACCACACCGATTGGCGCACCG
CATTGGCGGTGTTGAGCGGGTTCGATCTGCTGTGTGCGCTGGCGTTCTTCTGGTTGCTGCCGCCGTCGCGCAACTTCGTG
CGCCGGCACGGCATCAACCTGCGCTTCCATCTGAGCGCCTGGGCCGGGCATCTGCGCGACCGCAATCTGCCGTTTCTGTT
CGCGCTGCCGTTCCTGTTGATGGGTGTATTCGTGTGCCTGTACAACTACGCCGGCTTCCGCCTGGGTGGGCCGGAATTCG
GCTTGAGCCAGAGCCAGATCGGCATGATCTTCAGCGCCTATGTGTTCGGTATCGTCAGCTCGTCGGTGGCCGGTGCAGCG
TCGGACCGGTTCGGGCGCGGGCCGGTGGTCACCGCCGGCATCGTGTTGTGCGTGCTCGGCGTGACGCTGACCCTGGCGCG
TGTGTTGGCGGTGGTGGTGGCTGGCATCGTGCTGCTGACGATCGGGTTTTTCATCGCGCATTCGGCGGCCAGCGCGTGGG
TCAGCCGGCTCGGTGGCGCGCATCGCAGCCATGCCGCGTCGCTGTATCTGCTGGCCTACTACGCCGGCGCCAGCACGATC
GGCGCGCTCGGCGGCTGGTTCTGGCAGCACGGTGGCTGGGGCGCGTTGGTCGGTATGTGGCTGACGCTGTTGGCGATCGC
TTTTGCGGCGGCCTACATCCTGCGCCAACGCGCCGACGACGCGCGTCCCTACGGGCGCTTTGCGCCACATCCTGTGCGGG
GCGAGTGA

Upstream 100 bases:

>100_bases
GGCCGATGCCCACCCGCGCGGCAGCACGGGTGAAGTTGCCTTCTTCGGCGACCGCCAGGAAGTAACGCAGGTGGCGCAGT
TCCATCCATCTTTTCCAGAT

Downstream 100 bases:

>100_bases
GGCAGATCGACCGACGCTTCTGGCGTGCCCGCTTGCGGGTGGTTTGCGATGCATAAGACGTGGCAGCCGCCGCACCTTGT
GCCAAGGTTGCCAACAGACG

Product: MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MTTAGIIYWTGGGGGRILAILRLKCALVPSSDRRPGPLLHPSPSTVAGAGADALAALRIRLALFLAGFATFSLLYSVQPV
LPEFARAFQVDAATASLPLSLATGALALAIFCAGAVSENLGRRGLMFASIAIAAVLNLIAAFLPHWGALVVIRTLSGIAL
GGVPAVAMVYLGEELPANKMGAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSGFDLLCALAFFWLLPPSRNFV
RRHGINLRFHLSAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGMIFSAYVFGIVSSSVAGAA
SDRFGRGPVVTAGIVLCVLGVTLTLARVLAVVVAGIVLLTIGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGASTI
GALGGWFWQHGGWGALVGMWLTLLAIAFAAAYILRQRADDARPYGRFAPHPVRGE

Sequences:

>Translated_455_residues
MTTAGIIYWTGGGGGRILAILRLKCALVPSSDRRPGPLLHPSPSTVAGAGADALAALRIRLALFLAGFATFSLLYSVQPV
LPEFARAFQVDAATASLPLSLATGALALAIFCAGAVSENLGRRGLMFASIAIAAVLNLIAAFLPHWGALVVIRTLSGIAL
GGVPAVAMVYLGEELPANKMGAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSGFDLLCALAFFWLLPPSRNFV
RRHGINLRFHLSAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGMIFSAYVFGIVSSSVAGAA
SDRFGRGPVVTAGIVLCVLGVTLTLARVLAVVVAGIVLLTIGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGASTI
GALGGWFWQHGGWGALVGMWLTLLAIAFAAAYILRQRADDARPYGRFAPHPVRGE
>Mature_454_residues
TTAGIIYWTGGGGGRILAILRLKCALVPSSDRRPGPLLHPSPSTVAGAGADALAALRIRLALFLAGFATFSLLYSVQPVL
PEFARAFQVDAATASLPLSLATGALALAIFCAGAVSENLGRRGLMFASIAIAAVLNLIAAFLPHWGALVVIRTLSGIALG
GVPAVAMVYLGEELPANKMGAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSGFDLLCALAFFWLLPPSRNFVR
RHGINLRFHLSAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGMIFSAYVFGIVSSSVAGAAS
DRFGRGPVVTAGIVLCVLGVTLTLARVLAVVVAGIVLLTIGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGASTIG
ALGGWFWQHGGWGALVGMWLTLLAIAFAAAYILRQRADDARPYGRFAPHPVRGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=413, Percent_Identity=38.7409200968523, Blast_Score=276, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47727; Mature: 47595

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS00213 LIPOCALIN ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAGIIYWTGGGGGRILAILRLKCALVPSSDRRPGPLLHPSPSTVAGAGADALAALRIR
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LALFLAGFATFSLLYSVQPVLPEFARAFQVDAATASLPLSLATGALALAIFCAGAVSENL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GRRGLMFASIAIAAVLNLIAAFLPHWGALVVIRTLSGIALGGVPAVAMVYLGEELPANKM
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
GAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSGFDLLCALAFFWLLPPSRNFV
CCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRHGINLRFHLSAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQI
HHCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
GMIFSAYVFGIVSSSVAGAASDRFGRGPVVTAGIVLCVLGVTLTLARVLAVVVAGIVLLT
HHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGASTIGALGGWFWQHGGWGALVGMW
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHH
LTLLAIAFAAAYILRQRADDARPYGRFAPHPVRGE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTAGIIYWTGGGGGRILAILRLKCALVPSSDRRPGPLLHPSPSTVAGAGADALAALRIR
CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LALFLAGFATFSLLYSVQPVLPEFARAFQVDAATASLPLSLATGALALAIFCAGAVSENL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GRRGLMFASIAIAAVLNLIAAFLPHWGALVVIRTLSGIALGGVPAVAMVYLGEELPANKM
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
GAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSGFDLLCALAFFWLLPPSRNFV
CCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRHGINLRFHLSAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQI
HHCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
GMIFSAYVFGIVSSSVAGAASDRFGRGPVVTAGIVLCVLGVTLTLARVLAVVVAGIVLLT
HHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGASTIGALGGWFWQHGGWGALVGMW
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHH
LTLLAIAFAAAYILRQRADDARPYGRFAPHPVRGE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]