Click here to switch to the map view.

The map label for this gene is 84625065

Identifier: 84625065

GI number: 84625065

Start: 3868281

End: 3869969

Strand: Reverse

Name: 84625065

Synonym: XOO_3408

Alternate gene names: NA

Gene position: 3869969-3868281 (Counterclockwise)

Preceding gene: 84625071

Following gene: 84625064

Centisome position: 78.34

GC content: 67.97

Gene sequence:

>1689_bases
ATGCCTGTACCGATTCGCATCCTGAGTGTTCTTTTGCTGGTCGCAGTGTCCGTCAACGCCACCGCAGCACCCAAGAAAGC
ACCGCCCGCTCCGCCGACCGGCAGTGCCGGCGTCACCTCGCTGGAACCCGTGCTGGCAGGCGAATTCGCCTTGCAGGCCG
GGCAACTGGACGATGCCGCCCGCGCCTATCTGGACGCCGCCAAGGCCGAAGCCGGCGATGCCGGGCTGGCCGAGCGTGCG
GCCCGCATCTCCATGCTGGCCAACGACGACCCGCGTGCGATCGAAGCGCTGGCGTTGTGGCGCGCGCGCGCGCCGTCGTC
CATGTCCATGCGCAGCACCGAGGCCTCGCTGGCCCTGCGCCGCAACGATCTGCGCATCGCGCGCCGCGACTTGCTCGGCC
TGCTCAAGGAGCACGACCCGCGCGGCTGGCGCTTTGCGCTGATCGCCCTGGCCAATGGCGGCCGCGAGCCGGAAGCCTCG
GCCGATGTGCTCGAAGACCTGGTCAAGGCCGGTGCCATCCCGAATCAGATCGAAGCCTGGCAGGAATTCGGCCGGCTCGC
GCTGCGCATGGAGCGCCCGGCGCTGGCCAAGCGCATCATCAACGAAGTGGTGCGCCGTTTCCCCGAAGAGCCGCGCGTGG
CGTTGTTGCACGCTACCCAGCTGCAGCAGGAAGGCAAGGACGACGAAGCGCTGGCGCTGCTGAAAAACATCGAGCCAAAG
GCGGTCAAGAACTCCGAACTGCGCGGCGCGCTGGCCTTCGCCTACGACGCCATGGGCCAGACCGAAGCCGCGGCACGCGT
GCTTTCGACCGGGCCGCAGGACACCCAGACCTACGGCTTGCGCGCCTCGATGCTGGCCAAGGAAAAAGACCGCAGTTCGT
TGGAAGCGCTGTATACGGAGCTGAAAAGCAATGCCACCAAGCCCGATCCGGACCGCCGTCTGCTTCTGGGCAAGATCGCC
GAATTCCTCAAGCGGTACGACGAGGCGGTGGAGTGGTATCGCGGTGTGCCCGGTGGCCCGCAGCTGAGCGAGGCGCGTCT
GCGCGCCGCCAGCGCGCTGTACGAACTGGGCCGCAAGCCCGAAGCGCTTGCCGCAGCCCGTGCCCTGCAGGGCGACGCCA
GTGCCGACGACGACGCCCGCCGCGACGCCTACGTGCTCGAGGCCGAGTTGCATCAGCGGGCCGACGATGCGCCGGGCGAA
TTGGATGCCTTCGAACGCGGCTTGGCGGCTTATCCGGACGACAGCGCGCTGCTGTATGCCCGCGGGCTGGCCTGGGAGCG
GCGCGACGATGTCCCGCGTGCCGAGGCCGATCTGCGCAAGATCCTGGTGGCCGAACCGGAAAACGTCGCCGCGCTGAACG
CGCTGGGCTACACCTTGGCCGACCGCACCACGCGTTATAAGGAGGCGTTGGCGCTGATCGACCGCGCCCGCACCGCCGAC
CCGGACAACCTGGCCATCGTCGATAGCTATGGCTGGGTGCTGTATCGCATGGGCCGCACCAAGGAAGCGTTGGTGCAGCT
GCGCCGCGCCTGGGCGCTGGTCAAGGATCCGGAAATCGCGGCCCACGTGGGCGAAGTGCTTTGGGTTAGTGGCAAGCAGG
ACGAGGCACGCCGTTACTTCGATGAAGCGCGCCGCCTCGACCCGGACAACCGTGCGCTGCAACGCGCAGTGGAAAAGTTC
GGGCTATGA

Upstream 100 bases:

>100_bases
GTCTGGTGATTCAGTCCGAGCACCCACAACGTCATTGTTCAGTTGCTTGCGATAAGCTGGCGGCCATTCAGGGCCCCATT
TTACGGCCCGGTTGCCCCCG

Downstream 100 bases:

>100_bases
GCAAGGCATTGCGGACGCTGGCCCTGAGCGGGCTGGTGCTCGTCGGGCTATCGGCGTGCGTCAGCGTGCCGCGCGGGCAG
GGCAGTGGCGCGGCGGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MPVPIRILSVLLLVAVSVNATAAPKKAPPAPPTGSAGVTSLEPVLAGEFALQAGQLDDAARAYLDAAKAEAGDAGLAERA
ARISMLANDDPRAIEALALWRARAPSSMSMRSTEASLALRRNDLRIARRDLLGLLKEHDPRGWRFALIALANGGREPEAS
ADVLEDLVKAGAIPNQIEAWQEFGRLALRMERPALAKRIINEVVRRFPEEPRVALLHATQLQQEGKDDEALALLKNIEPK
AVKNSELRGALAFAYDAMGQTEAAARVLSTGPQDTQTYGLRASMLAKEKDRSSLEALYTELKSNATKPDPDRRLLLGKIA
EFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGDASADDDARRDAYVLEAELHQRADDAPGE
LDAFERGLAAYPDDSALLYARGLAWERRDDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTAD
PDNLAIVDSYGWVLYRMGRTKEALVQLRRAWALVKDPEIAAHVGEVLWVSGKQDEARRYFDEARRLDPDNRALQRAVEKF
GL

Sequences:

>Translated_562_residues
MPVPIRILSVLLLVAVSVNATAAPKKAPPAPPTGSAGVTSLEPVLAGEFALQAGQLDDAARAYLDAAKAEAGDAGLAERA
ARISMLANDDPRAIEALALWRARAPSSMSMRSTEASLALRRNDLRIARRDLLGLLKEHDPRGWRFALIALANGGREPEAS
ADVLEDLVKAGAIPNQIEAWQEFGRLALRMERPALAKRIINEVVRRFPEEPRVALLHATQLQQEGKDDEALALLKNIEPK
AVKNSELRGALAFAYDAMGQTEAAARVLSTGPQDTQTYGLRASMLAKEKDRSSLEALYTELKSNATKPDPDRRLLLGKIA
EFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGDASADDDARRDAYVLEAELHQRADDAPGE
LDAFERGLAAYPDDSALLYARGLAWERRDDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTAD
PDNLAIVDSYGWVLYRMGRTKEALVQLRRAWALVKDPEIAAHVGEVLWVSGKQDEARRYFDEARRLDPDNRALQRAVEKF
GL
>Mature_561_residues
PVPIRILSVLLLVAVSVNATAAPKKAPPAPPTGSAGVTSLEPVLAGEFALQAGQLDDAARAYLDAAKAEAGDAGLAERAA
RISMLANDDPRAIEALALWRARAPSSMSMRSTEASLALRRNDLRIARRDLLGLLKEHDPRGWRFALIALANGGREPEASA
DVLEDLVKAGAIPNQIEAWQEFGRLALRMERPALAKRIINEVVRRFPEEPRVALLHATQLQQEGKDDEALALLKNIEPKA
VKNSELRGALAFAYDAMGQTEAAARVLSTGPQDTQTYGLRASMLAKEKDRSSLEALYTELKSNATKPDPDRRLLLGKIAE
FLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGDASADDDARRDAYVLEAELHQRADDAPGEL
DAFERGLAAYPDDSALLYARGLAWERRDDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADP
DNLAIVDSYGWVLYRMGRTKEALVQLRRAWALVKDPEIAAHVGEVLWVSGKQDEARRYFDEARRLDPDNRALQRAVEKFG
L

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 61633; Mature: 61501

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPIRILSVLLLVAVSVNATAAPKKAPPAPPTGSAGVTSLEPVLAGEFALQAGQLDDAA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH
RAYLDAAKAEAGDAGLAERAARISMLANDDPRAIEALALWRARAPSSMSMRSTEASLALR
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RNDLRIARRDLLGLLKEHDPRGWRFALIALANGGREPEASADVLEDLVKAGAIPNQIEAW
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHH
QEFGRLALRMERPALAKRIINEVVRRFPEEPRVALLHATQLQQEGKDDEALALLKNIEPK
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCHHHHHHHHCCCCC
AVKNSELRGALAFAYDAMGQTEAAARVLSTGPQDTQTYGLRASMLAKEKDRSSLEALYTE
HHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSNATKPDPDRRLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
EALAAARALQGDASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPDDSALLYA
HHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEE
RGLAWERRDDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTAD
CCCCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDNLAIVDSYGWVLYRMGRTKEALVQLRRAWALVKDPEIAAHVGEVLWVSGKQDEARRYF
CCCEEEEECCCEEEHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHEEECCCHHHHHHHH
DEARRLDPDNRALQRAVEKFGL
HHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PVPIRILSVLLLVAVSVNATAAPKKAPPAPPTGSAGVTSLEPVLAGEFALQAGQLDDAA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH
RAYLDAAKAEAGDAGLAERAARISMLANDDPRAIEALALWRARAPSSMSMRSTEASLALR
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RNDLRIARRDLLGLLKEHDPRGWRFALIALANGGREPEASADVLEDLVKAGAIPNQIEAW
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHH
QEFGRLALRMERPALAKRIINEVVRRFPEEPRVALLHATQLQQEGKDDEALALLKNIEPK
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCHHHHHHHHCCCCC
AVKNSELRGALAFAYDAMGQTEAAARVLSTGPQDTQTYGLRASMLAKEKDRSSLEALYTE
HHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSNATKPDPDRRLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
EALAAARALQGDASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPDDSALLYA
HHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEE
RGLAWERRDDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTAD
CCCCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDNLAIVDSYGWVLYRMGRTKEALVQLRRAWALVKDPEIAAHVGEVLWVSGKQDEARRYF
CCCEEEEECCCEEEHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHEEECCCHHHHHHHH
DEARRLDPDNRALQRAVEKFGL
HHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]