| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625071
Identifier: 84625071
GI number: 84625071
Start: 3875880
End: 3877109
Strand: Reverse
Name: 84625071
Synonym: XOO_3414
Alternate gene names: NA
Gene position: 3877109-3875880 (Counterclockwise)
Preceding gene: 84625072
Following gene: 84625065
Centisome position: 78.48
GC content: 68.7
Gene sequence:
>1230_bases ATGGCCGCTCCATCTCAAGACCGCAACGACGGGCATGACCTGCCCGCACATCGCCGCAACCGCCAGATGGCGCAACTGGC GCCGTGGCTGTATCTCGGTGTCCTGCTGGGCAGCGGCTGGTTGTTGTTTCTGCACCCGCAAACCCGCGTGCTGCAGCCCG AACAGGCGTCAACCAGCTGGCTGCTGGCCTGGATCTTCGGCGGCATCGTCGTCGGCGCGGTGGTCTGGAGCCTGCGTCTG GCACGGCCGGGGCTGGCTCCGCCCTCGGCAAGCTATCCGTTGTCGGCACGCCTGCCCGATTCGTGGGGCGATGCCTACGC CGCACTCCTGCGCCCCACCACCGCAGACCCGATTGCCGCCGCCAAGCCGGACCCGGCCGGCACCCAGCGGGGCGCAGCCT GGCACCGCTTCGGTGGCGGCATGCTCAGCGTGGAAACGTTCGACCCCAACGACGCTACCCGTGCGCCTTGGGACGGGCTG GATGCGCAGTCCTGCATCATGCGGCTGGACGATGTGCGCCAGGCCTGGCACAACGCCGCCGCCAACCGCACGCTGCAGCA GGAACGCCGTTACTGGCTGGATGTAGTGCTGTCGCTGGTCGACCACGGCGTGATGCGCCCGCTGCAGGACGGCTATCTGC CCGACACCGCCGCGCTGCGCACCGAACGGTTTCTGCTGGGCGCCGATGCCGGCCCGATCGTGCTGTCCGAAGTGCCTGCG CTGTTTGCGCGGCGTCTGGCGCTGGCCATCGAGGCGATGCCGACCGCCCAGCGCGAGGCCGCTAGCGTGCAATGGCGCCT GCTGCAACAGCTGCATGCGCTGGTGGCCGAAGGCCGCATGCTGGACGAGCGTTCGCAGGTGATCCAGGTGCTGGCATGGA ACCCGGATGTGGACCTGGACCAGGTCGAAGTGGCCTACATCCTGGCCGCCGAATACCGCGAAGGCATGTCCGACTGGCTA CGCCGCGCCGCACTGGTGCGCCTGCCCGACAGCGCGCTGCGTCTGGACGAAGTGCTGCTATCGTCGTGCAGCCCGCTCGG CGCACAGGCCGATGACGTGGACTACGTGGAAGCGATGCGCCCGTTGCATCGCGGTTTCATGCAGCTGTTCAGTCAGCGCC TGAGCCAGTTGGTGCTGCAGGCCGAGCAGGCCGAACGTCAGGCCGGCCTGCATCCGCTGCCGCGTGCCACCGCAGCCAGC AACGAACTCTCTCAGGACTGGGCGGCGTAA
Upstream 100 bases:
>100_bases TTTGTAACTGGATGAGCGTGCGCCACTGAAGCAGGCCAACAGAGTTGGATTGCCTCGCCGATAACCTTGTCAACGCGATC AGGCGTGTACGGGGAATGTA
Downstream 100 bases:
>100_bases TCGTCGATCGGTTCAAGAACGCCGTAGCGTTCCTTGTGCAGCTTGCCGGGCAATGGCGGCAGCTGCACCAACGCATCGGG CACCGCGGTGTCCGGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MAAPSQDRNDGHDLPAHRRNRQMAQLAPWLYLGVLLGSGWLLFLHPQTRVLQPEQASTSWLLAWIFGGIVVGAVVWSLRL ARPGLAPPSASYPLSARLPDSWGDAYAALLRPTTADPIAAAKPDPAGTQRGAAWHRFGGGMLSVETFDPNDATRAPWDGL DAQSCIMRLDDVRQAWHNAAANRTLQQERRYWLDVVLSLVDHGVMRPLQDGYLPDTAALRTERFLLGADAGPIVLSEVPA LFARRLALAIEAMPTAQREAASVQWRLLQQLHALVAEGRMLDERSQVIQVLAWNPDVDLDQVEVAYILAAEYREGMSDWL RRAALVRLPDSALRLDEVLLSSCSPLGAQADDVDYVEAMRPLHRGFMQLFSQRLSQLVLQAEQAERQAGLHPLPRATAAS NELSQDWAA
Sequences:
>Translated_409_residues MAAPSQDRNDGHDLPAHRRNRQMAQLAPWLYLGVLLGSGWLLFLHPQTRVLQPEQASTSWLLAWIFGGIVVGAVVWSLRL ARPGLAPPSASYPLSARLPDSWGDAYAALLRPTTADPIAAAKPDPAGTQRGAAWHRFGGGMLSVETFDPNDATRAPWDGL DAQSCIMRLDDVRQAWHNAAANRTLQQERRYWLDVVLSLVDHGVMRPLQDGYLPDTAALRTERFLLGADAGPIVLSEVPA LFARRLALAIEAMPTAQREAASVQWRLLQQLHALVAEGRMLDERSQVIQVLAWNPDVDLDQVEVAYILAAEYREGMSDWL RRAALVRLPDSALRLDEVLLSSCSPLGAQADDVDYVEAMRPLHRGFMQLFSQRLSQLVLQAEQAERQAGLHPLPRATAAS NELSQDWAA >Mature_408_residues AAPSQDRNDGHDLPAHRRNRQMAQLAPWLYLGVLLGSGWLLFLHPQTRVLQPEQASTSWLLAWIFGGIVVGAVVWSLRLA RPGLAPPSASYPLSARLPDSWGDAYAALLRPTTADPIAAAKPDPAGTQRGAAWHRFGGGMLSVETFDPNDATRAPWDGLD AQSCIMRLDDVRQAWHNAAANRTLQQERRYWLDVVLSLVDHGVMRPLQDGYLPDTAALRTERFLLGADAGPIVLSEVPAL FARRLALAIEAMPTAQREAASVQWRLLQQLHALVAEGRMLDERSQVIQVLAWNPDVDLDQVEVAYILAAEYREGMSDWLR RAALVRLPDSALRLDEVLLSSCSPLGAQADDVDYVEAMRPLHRGFMQLFSQRLSQLVLQAEQAERQAGLHPLPRATAASN ELSQDWAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45192; Mature: 45061
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPSQDRNDGHDLPAHRRNRQMAQLAPWLYLGVLLGSGWLLFLHPQTRVLQPEQASTSW CCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHH LLAWIFGGIVVGAVVWSLRLARPGLAPPSASYPLSARLPDSWGDAYAALLRPTTADPIAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC AKPDPAGTQRGAAWHRFGGGMLSVETFDPNDATRAPWDGLDAQSCIMRLDDVRQAWHNAA CCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ANRTLQQERRYWLDVVLSLVDHGVMRPLQDGYLPDTAALRTERFLLGADAGPIVLSEVPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHHHHH LFARRLALAIEAMPTAQREAASVQWRLLQQLHALVAEGRMLDERSQVIQVLAWNPDVDLD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH QVEVAYILAAEYREGMSDWLRRAALVRLPDSALRLDEVLLSSCSPLGAQADDVDYVEAMR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH PLHRGFMQLFSQRLSQLVLQAEQAERQAGLHPLPRATAASNELSQDWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AAPSQDRNDGHDLPAHRRNRQMAQLAPWLYLGVLLGSGWLLFLHPQTRVLQPEQASTSW CCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHH LLAWIFGGIVVGAVVWSLRLARPGLAPPSASYPLSARLPDSWGDAYAALLRPTTADPIAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC AKPDPAGTQRGAAWHRFGGGMLSVETFDPNDATRAPWDGLDAQSCIMRLDDVRQAWHNAA CCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ANRTLQQERRYWLDVVLSLVDHGVMRPLQDGYLPDTAALRTERFLLGADAGPIVLSEVPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHHHHH LFARRLALAIEAMPTAQREAASVQWRLLQQLHALVAEGRMLDERSQVIQVLAWNPDVDLD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH QVEVAYILAAEYREGMSDWLRRAALVRLPDSALRLDEVLLSSCSPLGAQADDVDYVEAMR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH PLHRGFMQLFSQRLSQLVLQAEQAERQAGLHPLPRATAASNELSQDWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA